RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 LACRTQ9GZZ8 138 aa12.18□□□□□ -0.46
NEIL1-202ENST00000561643 GPCPD1Q9NPB8 672 aa12.18□□□□□ -0.46
NEIL1-202ENST00000561643 L1RE1Q9UN81 338 aa12.18□□□□□ -0.46
NEIL1-202ENST00000561643 POTEMA6NI47 508 aa12.18□□□□□ -0.46
NEIL1-202ENST00000561643 MYMKA6NI61 221 aa12.18□□□□□ -0.46
NEIL1-202ENST00000561643 SLC37A4O43826 429 aa12.18□□□□□ -0.46
NEIL1-202ENST00000561643 TNNI2P48788 182 aa12.18□□□□□ -0.46
NEIL1-202ENST00000561643 SPA17Q15506 151 aa12.18□□□□□ -0.46
NEIL1-202ENST00000561643 TBC1D22AQ8WUA7 517 aa12.18□□□□□ -0.46
NEIL1-202ENST00000561643 CCDC42Q96M95 316 aa12.18□□□□□ -0.46
NEIL1-202ENST00000561643 ERGIC2Q96RQ1 377 aa12.18□□□□□ -0.46
NEIL1-202ENST00000561643 BLOC1S4Q9NUP1 217 aa12.18□□□□□ -0.46
NEIL1-202ENST00000561643 STK17AQ9UEE5 414 aa12.18□□□□□ -0.46
NEIL1-202ENST00000561643 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.17□□□□□ -0.46
NEIL1-202ENST00000561643 MACROD2A1Z1Q3 448 aa12.17□□□□□ -0.46
NEIL1-202ENST00000561643 hCG_1984214I3L0E3 225 aa12.17□□□□□ -0.46
NEIL1-202ENST00000561643 NKRFO15226 690 aaKnown RBP eCLIP12.17□□□□□ -0.46
NEIL1-202ENST00000561643 UNC13DQ70J99 1090 aa12.17□□□□□ -0.46
NEIL1-202ENST00000561643 ZNF713Q8N859 430 aaPredicted RBP12.17□□□□□ -0.46
NEIL1-202ENST00000561643 CAGE1Q8TC20 777 aa12.17□□□□□ -0.46
NEIL1-202ENST00000561643 SNX29Q8TEQ0 813 aa12.17□□□□□ -0.46
NEIL1-202ENST00000561643 MTMR9Q96QG7 549 aa12.17□□□□□ -0.46
NEIL1-202ENST00000561643 MTMR4Q9NYA4 1195 aa12.17□□□□□ -0.46
NEIL1-202ENST00000561643 RCCD1A6NED2 376 aa12.17□□□□□ -0.46
NEIL1-202ENST00000561643 KIF5AQ12840 1032 aa12.17□□□□□ -0.46
NEIL1-202ENST00000561643 ASPRV1Q53RT3 343 aa12.17□□□□□ -0.46
NEIL1-202ENST00000561643 KRT79Q5XKE5 535 aa12.17□□□□□ -0.46
NEIL1-202ENST00000561643 CENPPQ6IPU0 288 aa12.17□□□□□ -0.46
NEIL1-202ENST00000561643 CLEC10AQ8IUN9 316 aa12.17□□□□□ -0.46
NEIL1-202ENST00000561643 ZSCAN29Q8IWY8 852 aaPredicted RBP12.17□□□□□ -0.46
NEIL1-202ENST00000561643 FAM163AQ96GL9 167 aaPredicted RBP12.17□□□□□ -0.46
NEIL1-202ENST00000561643 GJD4Q96KN9 370 aaPredicted RBP12.17□□□□□ -0.46
NEIL1-202ENST00000561643 MMS19Q96T76 1030 aa12.17□□□□□ -0.46
NEIL1-202ENST00000561643 DDX60LQ5H9U9 1706 aaKnown RBP12.17□□□□□ -0.46
NEIL1-202ENST00000561643 GAKO14976 1311 aa12.17□□□□□ -0.46
NEIL1-202ENST00000561643 SPATA31A6Q5VVP1 1343 aa12.17□□□□□ -0.46
NEIL1-202ENST00000561643 F8W031 263 aaPredicted RBP12.17□□□□□ -0.46
NEIL1-202ENST00000561643 MARCH6O60337 910 aa12.17□□□□□ -0.46
NEIL1-202ENST00000561643 FXR2P51116 673 aaKnown RBP eCLIP12.17□□□□□ -0.46
NEIL1-202ENST00000561643 GTF2IP78347 998 aa12.17□□□□□ -0.46
NEIL1-202ENST00000561643 VWA3BQ502W6 1294 aa12.17□□□□□ -0.46
NEIL1-202ENST00000561643 DPP8Q6V1X1 898 aaPredicted RBP12.17□□□□□ -0.46
NEIL1-202ENST00000561643 SUGP1Q8IWZ8 645 aaKnown RBP12.17□□□□□ -0.46
NEIL1-202ENST00000561643 TBC1D16Q8TBP0 767 aa12.17□□□□□ -0.46
NEIL1-202ENST00000561643 PNMA5Q96PV4 448 aa12.17□□□□□ -0.46
NEIL1-202ENST00000561643 FAM207AQ9NSI2 230 aaPredicted RBP12.17□□□□□ -0.46
NEIL1-202ENST00000561643 POLLQ9UGP5 575 aa12.17□□□□□ -0.46
NEIL1-202ENST00000561643 DAGLAQ9Y4D2 1042 aa12.17□□□□□ -0.46
NEIL1-202ENST00000561643 MYH1P12882 1939 aa12.17□□□□□ -0.46
NEIL1-202ENST00000561643 PVALEFA0A1B0GWK0 134 aa12.16□□□□□ -0.46
NEIL1-202ENST00000561643 A0A1W2PQJ5 194 aa12.16□□□□□ -0.46
NEIL1-202ENST00000561643 RPS6KA5O75582 802 aa12.16□□□□□ -0.46
NEIL1-202ENST00000561643 SERPINB2P05120 415 aa12.16□□□□□ -0.46
NEIL1-202ENST00000561643 AKR1B1P15121 316 aa12.16□□□□□ -0.46
NEIL1-202ENST00000561643 CKAP4Q07065 602 aaKnown RBP12.16□□□□□ -0.46
NEIL1-202ENST00000561643 CASP8Q14790 479 aa12.16□□□□□ -0.46
NEIL1-202ENST00000561643 PPP2R5AQ15172 486 aa12.16□□□□□ -0.46
NEIL1-202ENST00000561643 CCDC96Q2M329 555 aa12.16□□□□□ -0.46
NEIL1-202ENST00000561643 COBLL1Q53SF7 1204 aa12.16□□□□□ -0.46
NEIL1-202ENST00000561643 FIGNQ5HY92 759 aa12.16□□□□□ -0.46
NEIL1-202ENST00000561643 PAPD7Q5XG87 772 aaKnown RBP12.16□□□□□ -0.46
NEIL1-202ENST00000561643 ZNF662Q6ZS27 426 aa12.16□□□□□ -0.46
NEIL1-202ENST00000561643 TADA2BQ86TJ2 420 aa12.16□□□□□ -0.46
NEIL1-202ENST00000561643 PRPF38AQ8NAV1 312 aaKnown RBP12.16□□□□□ -0.46
NEIL1-202ENST00000561643 NDST4Q9H3R1 872 aa12.16□□□□□ -0.46
NEIL1-202ENST00000561643 MMRN2Q9H8L6 949 aa12.16□□□□□ -0.46
NEIL1-202ENST00000561643 JADE2Q9NQC1 790 aa12.16□□□□□ -0.46
NEIL1-202ENST00000561643 TRPC5Q9UL62 973 aaPredicted RBP12.16□□□□□ -0.46
NEIL1-202ENST00000561643 DUSP10Q9Y6W6 482 aa12.16□□□□□ -0.46
NEIL1-202ENST00000561643 FGFR1OPO95684 399 aaKnown RBP12.16□□□□□ -0.46
NEIL1-202ENST00000561643 ERCC3P19447 782 aa12.16□□□□□ -0.46
NEIL1-202ENST00000561643 CRY2Q49AN0 593 aa12.16□□□□□ -0.46
NEIL1-202ENST00000561643 C2CD5Q86YS7 1000 aa12.16□□□□□ -0.46
NEIL1-202ENST00000561643 ZBTB12Q9Y330 459 aaPredicted RBP12.16□□□□□ -0.46
NEIL1-202ENST00000561643 BBOX1O75936 387 aa12.15□□□□□ -0.46
NEIL1-202ENST00000561643 PLEKP08567 350 aaPredicted RBP12.15□□□□□ -0.46
NEIL1-202ENST00000561643 MAP2K2P36507 400 aa12.15□□□□□ -0.46
NEIL1-202ENST00000561643 LIG3P49916 1009 aa12.15□□□□□ -0.46
NEIL1-202ENST00000561643 MNAT1P51948 309 aa12.15□□□□□ -0.46
NEIL1-202ENST00000561643 VAV2P52735 878 aa12.15□□□□□ -0.46
NEIL1-202ENST00000561643 ATP2B2Q01814 1243 aa12.15□□□□□ -0.46
NEIL1-202ENST00000561643 UBE2SQ16763 222 aa12.15□□□□□ -0.46
NEIL1-202ENST00000561643 HSP90B2PQ58FF3 399 aa12.15□□□□□ -0.46
NEIL1-202ENST00000561643 KRT26Q7Z3Y9 468 aa12.15□□□□□ -0.46
NEIL1-202ENST00000561643 RAD54LQ92698 747 aa12.15□□□□□ -0.46
NEIL1-202ENST00000561643 IQCDQ96DY2 449 aa12.15□□□□□ -0.46
NEIL1-202ENST00000561643 RIMBP2O15034 1052 aa12.15□□□□□ -0.46
NEIL1-202ENST00000561643 IBSPP21815 317 aaPredicted RBP12.15□□□□□ -0.46
NEIL1-202ENST00000561643 NOVP48745 357 aa12.15□□□□□ -0.46
NEIL1-202ENST00000561643 USP14P54578 494 aa12.15□□□□□ -0.46
NEIL1-202ENST00000561643 MAN2A1Q16706 1144 aa12.15□□□□□ -0.46
NEIL1-202ENST00000561643 WDR93Q6P2C0 686 aa12.15□□□□□ -0.46
NEIL1-202ENST00000561643 EFCAB13Q8IY85 973 aa12.15□□□□□ -0.46
NEIL1-202ENST00000561643 GUF1Q8N442 669 aaKnown RBP12.15□□□□□ -0.46
NEIL1-202ENST00000561643 KAT2BQ92831 832 aa12.15□□□□□ -0.46
NEIL1-202ENST00000561643 NUDT12Q9BQG2 462 aa12.15□□□□□ -0.46
NEIL1-202ENST00000561643 TSGA10Q9BZW7 698 aa12.15□□□□□ -0.46
NEIL1-202ENST00000561643 FAM204AQ9H8W3 233 aa12.15□□□□□ -0.46
NEIL1-202ENST00000561643 USO1O60763 962 aaKnown RBP12.15□□□□□ -0.46
NEIL1-202ENST00000561643 CDK17Q00537 523 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms