RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 CCDC194A0A1B0GVG4 234 aa8.56□□□□□ -1.04
TPM1-231ENST00000561395 SMCO2A6NFE2 343 aa8.56□□□□□ -1.04
TPM1-231ENST00000561395 TMEM232C9JQI7 657 aa8.56□□□□□ -1.04
TPM1-231ENST00000561395 WNT7AO00755 349 aa8.56□□□□□ -1.04
TPM1-231ENST00000561395 ATP2B1P20020 1258 aa8.56□□□□□ -1.04
TPM1-231ENST00000561395 CMA1P23946 247 aa8.56□□□□□ -1.04
TPM1-231ENST00000561395 ADCY7P51828 1080 aa8.56□□□□□ -1.04
TPM1-231ENST00000561395 NDUFA8P51970 172 aa8.56□□□□□ -1.04
TPM1-231ENST00000561395 STAT2P52630 851 aa8.56□□□□□ -1.04
TPM1-231ENST00000561395 IKQ13123 557 aaPredicted RBP8.56□□□□□ -1.04
TPM1-231ENST00000561395 SNW1Q13573 536 aaKnown RBP8.56□□□□□ -1.04
TPM1-231ENST00000561395 CDC37Q16543 378 aaPredicted RBP8.56□□□□□ -1.04
TPM1-231ENST00000561395 QRICH1Q2TAL8 776 aa8.56□□□□□ -1.04
TPM1-231ENST00000561395 NOL9Q5SY16 702 aaKnown RBP8.56□□□□□ -1.04
TPM1-231ENST00000561395 L1TD1Q5T7N2 865 aaKnown RBP8.56□□□□□ -1.04
TPM1-231ENST00000561395 RESP18Q5W5W9 173 aa8.56□□□□□ -1.04
TPM1-231ENST00000561395 RBM43Q6ZSC3 357 aaKnown RBP8.56□□□□□ -1.04
TPM1-231ENST00000561395 KRT25Q7Z3Z0 450 aa8.56□□□□□ -1.04
TPM1-231ENST00000561395 FMR1NBQ8N0W7 255 aaPredicted RBP8.56□□□□□ -1.04
TPM1-231ENST00000561395 SPICE1Q8N0Z3 855 aa8.56□□□□□ -1.04
TPM1-231ENST00000561395 REXO1Q8N1G1 1221 aaKnown RBP8.56□□□□□ -1.04
TPM1-231ENST00000561395 KRI1Q8N9T8 703 aaKnown RBP8.56□□□□□ -1.04
TPM1-231ENST00000561395 SMCR8Q8TEV9 937 aaPredicted RBP8.56□□□□□ -1.04
TPM1-231ENST00000561395 HMX1Q9NP08 348 aaPredicted RBP8.56□□□□□ -1.04
TPM1-231ENST00000561395 RIC8AQ9NPQ8 531 aa8.56□□□□□ -1.04
TPM1-231ENST00000561395 FBXO2Q9UK22 296 aaPredicted RBP8.56□□□□□ -1.04
TPM1-231ENST00000561395 OGDHLQ9ULD0 1010 aa8.56□□□□□ -1.04
TPM1-231ENST00000561395 SRPRBQ9Y5M8 271 aaKnown RBP8.56□□□□□ -1.04
TPM1-231ENST00000561395 BDP1A6H8Y1 2624 aa8.56□□□□□ -1.04
TPM1-231ENST00000561395 GBF1Q92538 1859 aa8.55□□□□□ -1.04
TPM1-231ENST00000561395 PLXNA1Q9UIW2 1896 aa8.55□□□□□ -1.04
TPM1-231ENST00000561395 A0A0G2JLL6 359 aaPredicted RBP8.55□□□□□ -1.04
TPM1-231ENST00000561395 A0A1B0GVL5 298 aa8.55□□□□□ -1.04
TPM1-231ENST00000561395 CXCL11O14625 94 aa8.55□□□□□ -1.04
TPM1-231ENST00000561395 PLA2G6O60733 806 aa8.55□□□□□ -1.04
TPM1-231ENST00000561395 KINO60870 393 aaKnown RBP8.55□□□□□ -1.04
TPM1-231ENST00000561395 FOSL2P15408 326 aa8.55□□□□□ -1.04
TPM1-231ENST00000561395 PFKFB1P16118 471 aa8.55□□□□□ -1.04
TPM1-231ENST00000561395 PTPREP23469 700 aa8.55□□□□□ -1.04
TPM1-231ENST00000561395 CLK2P49760 499 aaKnown RBP8.55□□□□□ -1.04
TPM1-231ENST00000561395 ATP2C1P98194 919 aaPredicted RBP8.55□□□□□ -1.04
TPM1-231ENST00000561395 TRIM32Q13049 653 aa8.55□□□□□ -1.04
TPM1-231ENST00000561395 LRRC26Q2I0M4 334 aa8.55□□□□□ -1.04
TPM1-231ENST00000561395 TJAP1Q5JTD0 557 aa8.55□□□□□ -1.04
TPM1-231ENST00000561395 FAM83BQ5T0W9 1011 aa8.55□□□□□ -1.04
TPM1-231ENST00000561395 SHC4Q6S5L8 630 aa8.55□□□□□ -1.04
TPM1-231ENST00000561395 GADL1Q6ZQY3 521 aa8.55□□□□□ -1.04
TPM1-231ENST00000561395 FASTKD5Q7L8L6 764 aaKnown RBP8.55□□□□□ -1.04
TPM1-231ENST00000561395 PRRT2Q7Z6L0 340 aaPredicted RBP8.55□□□□□ -1.04
TPM1-231ENST00000561395 CCDC84Q86UT8 332 aaPredicted RBP8.55□□□□□ -1.04
TPM1-231ENST00000561395 CLIC6Q96NY7 704 aa8.55□□□□□ -1.04
TPM1-231ENST00000561395 FEZ1Q99689 392 aa8.55□□□□□ -1.04
TPM1-231ENST00000561395 KIAA1683Q9H0B3 1180 aa8.55□□□□□ -1.04
TPM1-231ENST00000561395 TNMDQ9H2S6 317 aa8.55□□□□□ -1.04
TPM1-231ENST00000561395 TSPY26PQ9H489 355 aa8.55□□□□□ -1.04
TPM1-231ENST00000561395 HPSEQ9Y251 543 aa8.55□□□□□ -1.04
TPM1-231ENST00000561395 SLC45A1Q9Y2W3 748 aa8.55□□□□□ -1.04
TPM1-231ENST00000561395 MYH7BA7E2Y1 1941 aa8.54□□□□□ -1.04
TPM1-231ENST00000561395 CTAGE5O15320 804 aa8.54□□□□□ -1.04
TPM1-231ENST00000561395 COL6A1P12109 1028 aa8.54□□□□□ -1.04
TPM1-231ENST00000561395 MRE11P49959 708 aa8.54□□□□□ -1.04
TPM1-231ENST00000561395 GRIN1Q05586 938 aa8.54□□□□□ -1.04
TPM1-231ENST00000561395 NONOQ15233 471 aaKnown RBP eCLIP8.54□□□□□ -1.04
TPM1-231ENST00000561395 ZNF174Q15697 407 aa8.54□□□□□ -1.04
TPM1-231ENST00000561395 ZYXQ15942 572 aaKnown RBP8.54□□□□□ -1.04
TPM1-231ENST00000561395 CAMK4Q16566 473 aa8.54□□□□□ -1.04
TPM1-231ENST00000561395 INF2Q27J81 1249 aa8.54□□□□□ -1.04
TPM1-231ENST00000561395 FAM160B2Q86V87 743 aa8.54□□□□□ -1.04
TPM1-231ENST00000561395 FBXO11Q86XK2 927 aa8.54□□□□□ -1.04
TPM1-231ENST00000561395 SCYL3Q8IZE3 742 aa8.54□□□□□ -1.04
TPM1-231ENST00000561395 ANKRD13CQ8N6S4 541 aa8.54□□□□□ -1.04
TPM1-231ENST00000561395 ZNF579Q8NAF0 562 aaKnown RBP8.54□□□□□ -1.04
TPM1-231ENST00000561395 CHURC1Q8WUH1 139 aa8.54□□□□□ -1.04
TPM1-231ENST00000561395 LPAR1Q92633 364 aa8.54□□□□□ -1.04
TPM1-231ENST00000561395 CUL5Q93034 780 aa8.54□□□□□ -1.04
TPM1-231ENST00000561395 FERMT2Q96AC1 680 aa8.54□□□□□ -1.04
TPM1-231ENST00000561395 LBHD1Q9BQE6 289 aaPredicted RBP8.54□□□□□ -1.04
TPM1-231ENST00000561395 FUCA2Q9BTY2 467 aa8.54□□□□□ -1.04
TPM1-231ENST00000561395 WDR18Q9BV38 432 aa8.54□□□□□ -1.04
TPM1-231ENST00000561395 AMNQ9BXJ7 453 aa8.54□□□□□ -1.04
TPM1-231ENST00000561395 GLT8D2Q9H1C3 349 aa8.54□□□□□ -1.04
TPM1-231ENST00000561395 SEMA6BQ9H3T3 888 aa8.54□□□□□ -1.04
TPM1-231ENST00000561395 GRPEL1Q9HAV7 217 aa8.54□□□□□ -1.04
TPM1-231ENST00000561395 FEM1BQ9UK73 627 aa8.54□□□□□ -1.04
TPM1-231ENST00000561395 PRR12Q9ULL5 1215 aa8.54□□□□□ -1.04
TPM1-231ENST00000561395 PCDHA1Q9Y5I3 950 aa8.54□□□□□ -1.04
TPM1-231ENST00000561395 MRVI1Q9Y6F6 885 aa8.54□□□□□ -1.04
TPM1-231ENST00000561395 WDR46O15213 610 aaKnown RBP8.53□□□□□ -1.04
TPM1-231ENST00000561395 ZNF202O95125 648 aa8.53□□□□□ -1.04
TPM1-231ENST00000561395 MCM7P33993 719 aa8.53□□□□□ -1.04
TPM1-231ENST00000561395 SYKP43405 635 aa8.53□□□□□ -1.04
TPM1-231ENST00000561395 PSEN1P49768 467 aa8.53□□□□□ -1.04
TPM1-231ENST00000561395 MRPL12P52815 198 aaKnown RBP8.53□□□□□ -1.04
TPM1-231ENST00000561395 SNAP25P60880 206 aa8.53□□□□□ -1.04
TPM1-231ENST00000561395 PTGDRQ13258 359 aa8.53□□□□□ -1.04
TPM1-231ENST00000561395 ORC2Q13416 577 aaPredicted RBP8.53□□□□□ -1.04
TPM1-231ENST00000561395 PDAP1Q13442 181 aaKnown RBP8.53□□□□□ -1.04
TPM1-231ENST00000561395 UBE2SQ16763 222 aa8.53□□□□□ -1.04
TPM1-231ENST00000561395 FAM110CQ1W6H9 321 aa8.53□□□□□ -1.04
TPM1-231ENST00000561395 JAKMIP3Q5VZ66 844 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms