RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 WDR46O15213 610 aaKnown RBP6.36□□□□□ -1.39
ZEB1-220ENST00000560909 CYTH3O43739 400 aa6.36□□□□□ -1.39
ZEB1-220ENST00000560909 DHX16O60231 1041 aaKnown RBP6.36□□□□□ -1.39
ZEB1-220ENST00000560909 FDPSP14324 419 aaKnown RBP6.36□□□□□ -1.39
ZEB1-220ENST00000560909 KIF5BP33176 963 aa6.36□□□□□ -1.39
ZEB1-220ENST00000560909 ADD1P35611 737 aaKnown RBP6.36□□□□□ -1.39
ZEB1-220ENST00000560909 FGD1P98174 961 aa6.36□□□□□ -1.39
ZEB1-220ENST00000560909 PDE4DQ08499 809 aa6.36□□□□□ -1.39
ZEB1-220ENST00000560909 BECN1Q14457 450 aa6.36□□□□□ -1.39
ZEB1-220ENST00000560909 RTN1Q16799 776 aa6.36□□□□□ -1.39
ZEB1-220ENST00000560909 ASPRV1Q53RT3 343 aa6.36□□□□□ -1.39
ZEB1-220ENST00000560909 SLFN13Q68D06 897 aa6.36□□□□□ -1.39
ZEB1-220ENST00000560909 USP17L2Q6R6M4 530 aa6.36□□□□□ -1.39
ZEB1-220ENST00000560909 SYNE3Q6ZMZ3 975 aa6.36□□□□□ -1.39
ZEB1-220ENST00000560909 NFXL1Q6ZNB6 911 aa6.36□□□□□ -1.39
ZEB1-220ENST00000560909 HSCBQ8IWL3 235 aa6.36□□□□□ -1.39
ZEB1-220ENST00000560909 FAM177A1Q8N128 213 aaPredicted RBP6.36□□□□□ -1.39
ZEB1-220ENST00000560909 LRRC47Q8N1G4 583 aaKnown RBP6.36□□□□□ -1.39
ZEB1-220ENST00000560909 SRBD1Q8N5C6 995 aaKnown RBP6.36□□□□□ -1.39
ZEB1-220ENST00000560909 NECAB1Q8N987 351 aa6.36□□□□□ -1.39
ZEB1-220ENST00000560909 PROCA1Q8NCQ7 364 aaPredicted RBP6.36□□□□□ -1.39
ZEB1-220ENST00000560909 NSUN7Q8NE18 718 aaKnown RBP6.36□□□□□ -1.39
ZEB1-220ENST00000560909 SLC10A4Q96EP9 437 aa6.36□□□□□ -1.39
ZEB1-220ENST00000560909 WNK4Q96J92 1243 aa6.36□□□□□ -1.39
ZEB1-220ENST00000560909 SLKQ9H2G2 1235 aaPredicted RBP6.36□□□□□ -1.39
ZEB1-220ENST00000560909 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.36□□□□□ -1.39
ZEB1-220ENST00000560909 MYPNQ86TC9 1320 aa6.35□□□□□ -1.39
ZEB1-220ENST00000560909 STK36Q9NRP7 1315 aa6.35□□□□□ -1.39
ZEB1-220ENST00000560909 RASSF10A6NK89 507 aa6.35□□□□□ -1.39
ZEB1-220ENST00000560909 GOLGA8AA7E2F4 631 aa6.35□□□□□ -1.39
ZEB1-220ENST00000560909 FAM155AB1AL88 458 aaPredicted RBP6.35□□□□□ -1.39
ZEB1-220ENST00000560909 KLRF2D3W0D1 207 aa6.35□□□□□ -1.39
ZEB1-220ENST00000560909 PRPF3O43395 683 aaKnown RBP6.35□□□□□ -1.39
ZEB1-220ENST00000560909 PARP1P09874 1014 aaKnown RBP6.35□□□□□ -1.39
ZEB1-220ENST00000560909 BMP3P12645 472 aa6.35□□□□□ -1.39
ZEB1-220ENST00000560909 ANP32AP39687 249 aaKnown RBP6.35□□□□□ -1.39
ZEB1-220ENST00000560909 METAP2P50579 478 aaKnown RBP eCLIP6.35□□□□□ -1.39
ZEB1-220ENST00000560909 HUNKP57058 714 aa6.35□□□□□ -1.39
ZEB1-220ENST00000560909 MTMR2Q13614 643 aa6.35□□□□□ -1.39
ZEB1-220ENST00000560909 PRKG1Q13976 671 aa6.35□□□□□ -1.39
ZEB1-220ENST00000560909 PKN1Q16512 942 aa6.35□□□□□ -1.39
ZEB1-220ENST00000560909 RGMBQ6NW40 437 aa6.35□□□□□ -1.39
ZEB1-220ENST00000560909 LBX2Q6XYB7 198 aa6.35□□□□□ -1.39
ZEB1-220ENST00000560909 CATSPERGQ6ZRH7 1159 aa6.35□□□□□ -1.39
ZEB1-220ENST00000560909 CHSY3Q70JA7 882 aa6.35□□□□□ -1.39
ZEB1-220ENST00000560909 CCDC84Q86UT8 332 aaPredicted RBP6.35□□□□□ -1.39
ZEB1-220ENST00000560909 MICU3Q86XE3 530 aa6.35□□□□□ -1.39
ZEB1-220ENST00000560909 TEX2Q8IWB9 1127 aa6.35□□□□□ -1.39
ZEB1-220ENST00000560909 STAG2Q8N3U4 1231 aa6.35□□□□□ -1.39
ZEB1-220ENST00000560909 CTCFLQ8NI51 663 aaPredicted RBP6.35□□□□□ -1.39
ZEB1-220ENST00000560909 OPTNQ96CV9 577 aa6.35□□□□□ -1.39
ZEB1-220ENST00000560909 IPO9Q96P70 1041 aaKnown RBP6.35□□□□□ -1.39
ZEB1-220ENST00000560909 MYL10Q9BUA6 226 aa6.35□□□□□ -1.39
ZEB1-220ENST00000560909 RNF26Q9BY78 433 aaPredicted RBP6.35□□□□□ -1.39
ZEB1-220ENST00000560909 ELP3Q9H9T3 547 aa6.35□□□□□ -1.39
ZEB1-220ENST00000560909 NCOA5Q9HCD5 579 aaKnown RBP6.35□□□□□ -1.39
ZEB1-220ENST00000560909 GOPCQ9HD26 462 aa6.35□□□□□ -1.39
ZEB1-220ENST00000560909 ZCCHC17Q9NP64 241 aaKnown RBP6.35□□□□□ -1.39
ZEB1-220ENST00000560909 FEM1BQ9UK73 627 aa6.35□□□□□ -1.39
ZEB1-220ENST00000560909 SLC45A1Q9Y2W3 748 aa6.35□□□□□ -1.39
ZEB1-220ENST00000560909 ATP2A1O14983 1001 aa6.34□□□□□ -1.39
ZEB1-220ENST00000560909 CDKL5O76039 1030 aa6.34□□□□□ -1.39
ZEB1-220ENST00000560909 PLEKHA8P1O95397 391 aa6.34□□□□□ -1.39
ZEB1-220ENST00000560909 F12P00748 615 aaPredicted RBP6.34□□□□□ -1.39
ZEB1-220ENST00000560909 PDIA4P13667 645 aaKnown RBP6.34□□□□□ -1.39
ZEB1-220ENST00000560909 VCAM1P19320 739 aa6.34□□□□□ -1.39
ZEB1-220ENST00000560909 RXRAP19793 462 aa6.34□□□□□ -1.39
ZEB1-220ENST00000560909 SLC1A4P43007 532 aa6.34□□□□□ -1.39
ZEB1-220ENST00000560909 GTF2A2P52657 109 aa6.34□□□□□ -1.39
ZEB1-220ENST00000560909 INHBEP58166 350 aa6.34□□□□□ -1.39
ZEB1-220ENST00000560909 CCT2P78371 535 aaKnown RBP6.34□□□□□ -1.39
ZEB1-220ENST00000560909 HMGN5P82970 282 aaKnown RBP6.34□□□□□ -1.39
ZEB1-220ENST00000560909 SNAPC2Q13487 334 aa6.34□□□□□ -1.39
ZEB1-220ENST00000560909 TTBK2Q6IQ55 1244 aa6.34□□□□□ -1.39
ZEB1-220ENST00000560909 CPLX2Q6PUV4 134 aaKnown RBP6.34□□□□□ -1.39
ZEB1-220ENST00000560909 LYPD8Q6UX82 237 aa6.34□□□□□ -1.39
ZEB1-220ENST00000560909 FASTKD5Q7L8L6 764 aaKnown RBP6.34□□□□□ -1.39
ZEB1-220ENST00000560909 RASGRP2Q7LDG7 609 aa6.34□□□□□ -1.39
ZEB1-220ENST00000560909 FAM160B2Q86V87 743 aa6.34□□□□□ -1.39
ZEB1-220ENST00000560909 RASAL3Q86YV0 1011 aa6.34□□□□□ -1.39
ZEB1-220ENST00000560909 RNF135Q8IUD6 432 aa6.34□□□□□ -1.39
ZEB1-220ENST00000560909 CCDC83Q8IWF9 413 aa6.34□□□□□ -1.39
ZEB1-220ENST00000560909 PRPF38AQ8NAV1 312 aaKnown RBP6.34□□□□□ -1.39
ZEB1-220ENST00000560909 REPS2Q8NFH8 660 aa6.34□□□□□ -1.39
ZEB1-220ENST00000560909 CHURC1Q8WUH1 139 aa6.34□□□□□ -1.39
ZEB1-220ENST00000560909 BRI3BPQ8WY22 251 aa6.34□□□□□ -1.39
ZEB1-220ENST00000560909 JMJD4Q9H9V9 463 aa6.34□□□□□ -1.39
ZEB1-220ENST00000560909 SLC24A3Q9HC58 644 aa6.34□□□□□ -1.39
ZEB1-220ENST00000560909 CWC22Q9HCG8 908 aaKnown RBP6.34□□□□□ -1.39
ZEB1-220ENST00000560909 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.34□□□□□ -1.39
ZEB1-220ENST00000560909 DOCK1Q14185 1865 aa6.34□□□□□ -1.39
ZEB1-220ENST00000560909 PHIPQ8WWQ0 1821 aa6.34□□□□□ -1.4
ZEB1-220ENST00000560909 PNMA6FA0A0J9YX94 578 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 PTPDC1A2A3K4 754 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 MOXD2PA6NHM9 499 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 TRIM75PA6NK02 468 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 USP17L15C9J2P7 530 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 USP17L13C9JLJ4 530 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 USP17L11C9JVI0 530 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 USP17L18D6R9N7 530 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms