RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 HFE2Q6ZVN8 426 aa11.72□□□□□ -0.53
TPM1-225ENST00000560679 FBXO22Q8NEZ5 403 aa11.72□□□□□ -0.53
TPM1-225ENST00000560679 SP7Q8TDD2 431 aaPredicted RBP11.72□□□□□ -0.53
TPM1-225ENST00000560679 DCAF4Q8WV16 495 aa11.72□□□□□ -0.53
TPM1-225ENST00000560679 AFG1LQ8WV93 481 aa11.72□□□□□ -0.53
TPM1-225ENST00000560679 MRPL38Q96DV4 380 aaKnown RBP11.72□□□□□ -0.53
TPM1-225ENST00000560679 LRRCC1Q9C099 1032 aa11.72□□□□□ -0.53
TPM1-225ENST00000560679 ECHDC1Q9NTX5 307 aa11.72□□□□□ -0.53
TPM1-225ENST00000560679 GTF2IRD1Q9UHL9 959 aa11.72□□□□□ -0.53
TPM1-225ENST00000560679 NLRC5Q86WI3 1866 aa11.72□□□□□ -0.53
TPM1-225ENST00000560679 FRMPD2Q68DX3 1309 aaPredicted RBP11.71□□□□□ -0.53
TPM1-225ENST00000560679 KIAA1217Q5T5P2 1943 aa11.71□□□□□ -0.53
TPM1-225ENST00000560679 C19orf67A6NJJ6 358 aa11.71□□□□□ -0.53
TPM1-225ENST00000560679 ZFYP08048 801 aaPredicted RBP11.71□□□□□ -0.53
TPM1-225ENST00000560679 HTRA4P83105 476 aaPredicted RBP11.71□□□□□ -0.53
TPM1-225ENST00000560679 ARHGAP1Q07960 439 aa11.71□□□□□ -0.53
TPM1-225ENST00000560679 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.71□□□□□ -0.53
TPM1-225ENST00000560679 NAPBQ9H115 298 aa11.71□□□□□ -0.53
TPM1-225ENST00000560679 TECTAO75443 2155 aa11.71□□□□□ -0.54
TPM1-225ENST00000560679 TSPY2A6NKD2 308 aa11.7□□□□□ -0.54
TPM1-225ENST00000560679 PARNO95453 639 aaKnown RBP11.7□□□□□ -0.54
TPM1-225ENST00000560679 CTDSPL2Q05D32 466 aa11.7□□□□□ -0.54
TPM1-225ENST00000560679 HIC1Q14526 733 aa11.7□□□□□ -0.54
TPM1-225ENST00000560679 PUS10Q3MIT2 529 aaKnown RBP11.7□□□□□ -0.54
TPM1-225ENST00000560679 TIGD5Q53EQ6 642 aa11.7□□□□□ -0.54
TPM1-225ENST00000560679 TCEAL5Q5H9L2 206 aa11.7□□□□□ -0.54
TPM1-225ENST00000560679 RNF207Q6ZRF8 634 aa11.7□□□□□ -0.54
TPM1-225ENST00000560679 DNERQ8NFT8 737 aa11.7□□□□□ -0.54
TPM1-225ENST00000560679 HDAC6Q9UBN7 1215 aa11.7□□□□□ -0.54
TPM1-225ENST00000560679 RALGAPA2Q2PPJ7 1873 aa11.7□□□□□ -0.54
TPM1-225ENST00000560679 EFCAB14O75071 495 aa11.69□□□□□ -0.54
TPM1-225ENST00000560679 SLC3A2P08195 630 aaKnown RBP11.69□□□□□ -0.54
TPM1-225ENST00000560679 IRS1P35568 1242 aa11.69□□□□□ -0.54
TPM1-225ENST00000560679 ZNF200P98182 395 aaPredicted RBP11.69□□□□□ -0.54
TPM1-225ENST00000560679 IKBKEQ14164 716 aa11.69□□□□□ -0.54
TPM1-225ENST00000560679 LY6KQ17RY6 165 aa11.69□□□□□ -0.54
TPM1-225ENST00000560679 EPC2Q52LR7 807 aa11.69□□□□□ -0.54
TPM1-225ENST00000560679 PPP4R3BQ5MIZ7 849 aa11.69□□□□□ -0.54
TPM1-225ENST00000560679 ZNF618Q5T7W0 954 aa11.69□□□□□ -0.54
TPM1-225ENST00000560679 ADHFE1Q8IWW8 467 aa11.69□□□□□ -0.54
TPM1-225ENST00000560679 BANK1Q8NDB2 785 aa11.69□□□□□ -0.54
TPM1-225ENST00000560679 PRSS33Q8NF86 280 aa11.69□□□□□ -0.54
TPM1-225ENST00000560679 PABPC5Q96DU9 382 aaKnown RBP11.69□□□□□ -0.54
TPM1-225ENST00000560679 NACAP1Q9BZK3 213 aa11.69□□□□□ -0.54
TPM1-225ENST00000560679 GPCPD1Q9NPB8 672 aa11.69□□□□□ -0.54
TPM1-225ENST00000560679 PRKAG3Q9UGI9 489 aa11.69□□□□□ -0.54
TPM1-225ENST00000560679 DDX19BQ9UMR2 479 aa11.69□□□□□ -0.54
TPM1-225ENST00000560679 INSL6Q9Y581 213 aa11.69□□□□□ -0.54
TPM1-225ENST00000560679 MYO7AQ13402 2215 aa11.69□□□□□ -0.54
TPM1-225ENST00000560679 WDR19Q8NEZ3 1342 aa11.68□□□□□ -0.54
TPM1-225ENST00000560679 HAS3O00219 553 aa11.68□□□□□ -0.54
TPM1-225ENST00000560679 LGR5O75473 907 aa11.68□□□□□ -0.54
TPM1-225ENST00000560679 F2P00734 622 aa11.68□□□□□ -0.54
TPM1-225ENST00000560679 GH1P01241 217 aa11.68□□□□□ -0.54
TPM1-225ENST00000560679 ZNF286BP0CG31 522 aa11.68□□□□□ -0.54
TPM1-225ENST00000560679 LTBRP36941 435 aa11.68□□□□□ -0.54
TPM1-225ENST00000560679 PSEN2P49810 448 aa11.68□□□□□ -0.54
TPM1-225ENST00000560679 PTK7Q13308 1070 aa11.68□□□□□ -0.54
TPM1-225ENST00000560679 ZMYM1Q5SVZ6 1142 aa11.68□□□□□ -0.54
TPM1-225ENST00000560679 MYOCDQ8IZQ8 938 aa11.68□□□□□ -0.54
TPM1-225ENST00000560679 CRBNQ96SW2 442 aa11.68□□□□□ -0.54
TPM1-225ENST00000560679 TMEM47Q9BQJ4 181 aa11.68□□□□□ -0.54
TPM1-225ENST00000560679 COL20A1Q9P218 1284 aa11.68□□□□□ -0.54
TPM1-225ENST00000560679 KMT2EQ8IZD2 1858 aa11.68□□□□□ -0.54
TPM1-225ENST00000560679 H3BNC9 293 aa11.67□□□□□ -0.54
TPM1-225ENST00000560679 PDHBP11177 359 aa11.67□□□□□ -0.54
TPM1-225ENST00000560679 PTPROQ16827 1216 aa11.67□□□□□ -0.54
TPM1-225ENST00000560679 CHST3Q7LGC8 479 aa11.67□□□□□ -0.54
TPM1-225ENST00000560679 RPAINQ86UA6 219 aa11.67□□□□□ -0.54
TPM1-225ENST00000560679 DBF4BQ8NFT6 615 aa11.67□□□□□ -0.54
TPM1-225ENST00000560679 MPHOSPH6Q99547 160 aaKnown RBP11.67□□□□□ -0.54
TPM1-225ENST00000560679 OSBPL7Q9BZF2 842 aa11.67□□□□□ -0.54
TPM1-225ENST00000560679 NSUN3Q9H649 340 aaKnown RBP11.67□□□□□ -0.54
TPM1-225ENST00000560679 CTNNA3Q9UI47 895 aa11.67□□□□□ -0.54
TPM1-225ENST00000560679 MUTYHQ9UIF7 546 aa11.67□□□□□ -0.54
TPM1-225ENST00000560679 ANAPC4Q9UJX5 808 aa11.67□□□□□ -0.54
TPM1-225ENST00000560679 ORC4O43929 436 aa11.66□□□□□ -0.54
TPM1-225ENST00000560679 RANBP6O60518 1105 aaKnown RBP11.66□□□□□ -0.54
TPM1-225ENST00000560679 AMHP03971 560 aa11.66□□□□□ -0.54
TPM1-225ENST00000560679 FGRP09769 529 aa11.66□□□□□ -0.54
TPM1-225ENST00000560679 TOP1P11387 765 aaKnown RBP11.66□□□□□ -0.54
TPM1-225ENST00000560679 DLX2Q07687 328 aaPredicted RBP11.66□□□□□ -0.54
TPM1-225ENST00000560679 ZNF543Q08ER8 600 aa11.66□□□□□ -0.54
TPM1-225ENST00000560679 GPM6BQ13491 265 aa11.66□□□□□ -0.54
TPM1-225ENST00000560679 MFSD10Q14728 455 aa11.66□□□□□ -0.54
TPM1-225ENST00000560679 SMAD2Q15796 467 aaKnown RBP11.66□□□□□ -0.54
TPM1-225ENST00000560679 DGKDQ16760 1214 aa11.66□□□□□ -0.54
TPM1-225ENST00000560679 CTC1Q2NKJ3 1217 aa11.66□□□□□ -0.54
TPM1-225ENST00000560679 HERC4Q5GLZ8 1057 aaPredicted RBP11.66□□□□□ -0.54
TPM1-225ENST00000560679 VPS53Q5VIR6 699 aa11.66□□□□□ -0.54
TPM1-225ENST00000560679 SEPT14Q6ZU15 432 aa11.66□□□□□ -0.54
TPM1-225ENST00000560679 FBXO11Q86XK2 927 aa11.66□□□□□ -0.54
TPM1-225ENST00000560679 C7orf31Q8N865 590 aa11.66□□□□□ -0.54
TPM1-225ENST00000560679 PI4K2BQ8TCG2 481 aa11.66□□□□□ -0.54
TPM1-225ENST00000560679 TBC1D5Q92609 795 aa11.66□□□□□ -0.54
TPM1-225ENST00000560679 EMID1Q96A84 441 aaPredicted RBP11.66□□□□□ -0.54
TPM1-225ENST00000560679 GPATCH3Q96I76 525 aa11.66□□□□□ -0.54
TPM1-225ENST00000560679 SAMD11Q96NU1 681 aa11.66□□□□□ -0.54
TPM1-225ENST00000560679 ALG1Q9BT22 464 aa11.66□□□□□ -0.54
TPM1-225ENST00000560679 CLDND1Q9NY35 253 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms