RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.55■□□□□ 0.42e-8■□□□□ 10.1
SNRPA1-210ENST00000560383 USP26Q9BXU7 913 aa17.55■□□□□ 0.4
SNRPA1-210ENST00000560383 SEMA6BQ9H3T3 888 aa17.55■□□□□ 0.4
SNRPA1-210ENST00000560383 POLR3EQ9NVU0 708 aa17.55■□□□□ 0.4
SNRPA1-210ENST00000560383 BRPF3Q9ULD4 1205 aa17.55■□□□□ 0.4
SNRPA1-210ENST00000560383 KIAA1217Q5T5P2 1943 aa17.55■□□□□ 0.4
SNRPA1-210ENST00000560383 CHD9Q3L8U1 2897 aa17.54■□□□□ 0.4
SNRPA1-210ENST00000560383 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.54■□□□□ 0.4
SNRPA1-210ENST00000560383 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.54■□□□□ 0.4
SNRPA1-210ENST00000560383 PTGS1P23219 599 aa17.54■□□□□ 0.4
SNRPA1-210ENST00000560383 PPP2R5BQ15173 497 aa17.54■□□□□ 0.4
SNRPA1-210ENST00000560383 RASIP1Q5U651 963 aa17.54■□□□□ 0.4
SNRPA1-210ENST00000560383 SYNE3Q6ZMZ3 975 aa17.54■□□□□ 0.4
SNRPA1-210ENST00000560383 MICU3Q86XE3 530 aa17.54■□□□□ 0.4
SNRPA1-210ENST00000560383 SCFD2Q8WU76 684 aa17.54■□□□□ 0.4
SNRPA1-210ENST00000560383 JAKMIP1Q96N16 626 aaKnown RBP17.54■□□□□ 0.4
SNRPA1-210ENST00000560383 AGXT2Q9BYV1 514 aa17.54■□□□□ 0.4
SNRPA1-210ENST00000560383 TTYH1Q9H313 450 aaPredicted RBP17.54■□□□□ 0.4
SNRPA1-210ENST00000560383 PXMP2Q9NR77 195 aa17.54■□□□□ 0.4
SNRPA1-210ENST00000560383 GCOM1H8Y6P7 765 aaPredicted RBP17.53■□□□□ 0.4
SNRPA1-210ENST00000560383 POLR2MP0CAP2 368 aa17.53■□□□□ 0.4
SNRPA1-210ENST00000560383 CSF2RAP15509 400 aa17.53■□□□□ 0.4
SNRPA1-210ENST00000560383 PURAQ00577 322 aaKnown RBP17.53■□□□□ 0.4
SNRPA1-210ENST00000560383 STXBP2Q15833 593 aa17.53■□□□□ 0.4
SNRPA1-210ENST00000560383 BRDTQ58F21 947 aaPredicted RBP17.53■□□□□ 0.4
SNRPA1-210ENST00000560383 TMEM240Q5SV17 173 aa17.53■□□□□ 0.4
SNRPA1-210ENST00000560383 BLOC1S2Q6QNY1 142 aa17.53■□□□□ 0.4
SNRPA1-210ENST00000560383 CDX2Q99626 313 aaPredicted RBP17.53■□□□□ 0.4
SNRPA1-210ENST00000560383 PPP1R12CQ9BZL4 782 aa17.53■□□□□ 0.4
SNRPA1-210ENST00000560383 HIPK3Q9H422 1215 aa17.53■□□□□ 0.4
SNRPA1-210ENST00000560383 RBM28Q9NW13 759 aaKnown RBP17.53■□□□□ 0.4
SNRPA1-210ENST00000560383 SEC63Q9UGP8 760 aaKnown RBP17.53■□□□□ 0.4
SNRPA1-210ENST00000560383 BAZ2BQ9UIF8 2168 aaKnown RBP17.52■□□□□ 0.4
SNRPA1-210ENST00000560383 ZBTB43O43298 467 aa17.52■□□□□ 0.4
SNRPA1-210ENST00000560383 B4GALT4O60513 344 aa17.52■□□□□ 0.4
SNRPA1-210ENST00000560383 EIF3JO75822 258 aaKnown RBP17.52■□□□□ 0.4
SNRPA1-210ENST00000560383 NR3C2P08235 984 aa17.52■□□□□ 0.4
SNRPA1-210ENST00000560383 CPA1P15085 419 aa17.52■□□□□ 0.4
SNRPA1-210ENST00000560383 RPS6KB1P23443 525 aa17.52■□□□□ 0.4
SNRPA1-210ENST00000560383 DNAJB2P25686 324 aa17.52■□□□□ 0.4
SNRPA1-210ENST00000560383 PSMA5P28066 241 aa17.52■□□□□ 0.4
SNRPA1-210ENST00000560383 HOXA13P31271 388 aaPredicted RBP17.52■□□□□ 0.4
SNRPA1-210ENST00000560383 FUT2Q10981 343 aa17.52■□□□□ 0.4
SNRPA1-210ENST00000560383 ARHGEF16Q5VV41 709 aa17.52■□□□□ 0.4
SNRPA1-210ENST00000560383 CCDC62Q6P9F0 684 aa17.52■□□□□ 0.4
SNRPA1-210ENST00000560383 C16orf59Q7L2K0 433 aa17.52■□□□□ 0.4
SNRPA1-210ENST00000560383 RAB11FIP4Q86YS3 637 aa17.52■□□□□ 0.4
SNRPA1-210ENST00000560383 CMTR1Q8N1G2 835 aaKnown RBP17.52■□□□□ 0.4
SNRPA1-210ENST00000560383 OR6J1Q8NGC5 347 aa17.52■□□□□ 0.4
SNRPA1-210ENST00000560383 PDCD2LQ9BRP1 358 aa17.52■□□□□ 0.4
SNRPA1-210ENST00000560383 IL23AQ9NPF7 189 aa17.52■□□□□ 0.4
SNRPA1-210ENST00000560383 VCANP13611 3396 aa17.52■□□□□ 0.39
SNRPA1-210ENST00000560383 KLF18A0A0U1RQI7 1052 aa17.51■□□□□ 0.39
SNRPA1-210ENST00000560383 A6NJR5 290 aa17.51■□□□□ 0.39
SNRPA1-210ENST00000560383 PIK3CDO00329 1044 aa17.51■□□□□ 0.39
SNRPA1-210ENST00000560383 KPNA6O60684 536 aa17.51■□□□□ 0.39
SNRPA1-210ENST00000560383 EIF2AK2P19525 551 aaKnown RBP17.51■□□□□ 0.39
SNRPA1-210ENST00000560383 CYP2C18P33260 490 aa17.51■□□□□ 0.39
SNRPA1-210ENST00000560383 TTLL4Q14679 1199 aa17.51■□□□□ 0.39
SNRPA1-210ENST00000560383 RTN1Q16799 776 aa17.51■□□□□ 0.39
SNRPA1-210ENST00000560383 Q6ZUG5 572 aa17.51■□□□□ 0.39
SNRPA1-210ENST00000560383 VSIG10LQ86VR7 867 aa17.51■□□□□ 0.39
SNRPA1-210ENST00000560383 PIBF1Q8WXW3 757 aa17.51■□□□□ 0.39
SNRPA1-210ENST00000560383 MTG1Q9BT17 334 aaPredicted RBP17.51■□□□□ 0.39
SNRPA1-210ENST00000560383 NOC4LQ9BVI4 516 aaKnown RBP17.51■□□□□ 0.39
SNRPA1-210ENST00000560383 TANC1Q9C0D5 1861 aa17.51■□□□□ 0.39
SNRPA1-210ENST00000560383 ALDH8A1Q9H2A2 487 aaPredicted RBP17.51■□□□□ 0.39
SNRPA1-210ENST00000560383 RNF39Q9H2S5 420 aa17.51■□□□□ 0.39
SNRPA1-210ENST00000560383 ZSWIM6Q9HCJ5 1215 aa17.51■□□□□ 0.39
SNRPA1-210ENST00000560383 FAM217BQ9NTX9 383 aaPredicted RBP17.51■□□□□ 0.39
SNRPA1-210ENST00000560383 FRMPD4Q14CM0 1322 aa17.5■□□□□ 0.39
SNRPA1-210ENST00000560383 CNTNAP5Q8WYK1 1306 aa17.5■□□□□ 0.39
SNRPA1-210ENST00000560383 CHD7Q9P2D1 2997 aa17.5■□□□□ 0.39
SNRPA1-210ENST00000560383 CUL9Q8IWT3 2517 aa17.5■□□□□ 0.39
SNRPA1-210ENST00000560383 ARIH2O95376 493 aa17.5■□□□□ 0.39
SNRPA1-210ENST00000560383 SUPT20HL2P0C7V6 817 aa17.5■□□□□ 0.39
SNRPA1-210ENST00000560383 TXNP10599 105 aaKnown RBP17.5■□□□□ 0.39
SNRPA1-210ENST00000560383 EVCP57679 992 aa17.5■□□□□ 0.39
SNRPA1-210ENST00000560383 PSMC6P62333 389 aa17.5■□□□□ 0.39
SNRPA1-210ENST00000560383 HERVK_113Q902F9 699 aa17.5■□□□□ 0.39
SNRPA1-210ENST00000560383 TM6SF1Q9BZW5 370 aa17.5■□□□□ 0.39
SNRPA1-210ENST00000560383 MTIF3Q9H2K0 278 aaKnown RBP17.5■□□□□ 0.39
SNRPA1-210ENST00000560383 NID2Q14112 1375 aa17.5■□□□□ 0.39
SNRPA1-210ENST00000560383 DLL1O00548 723 aa17.49■□□□□ 0.39
SNRPA1-210ENST00000560383 MEIS2O14770 477 aa17.49■□□□□ 0.39
SNRPA1-210ENST00000560383 PGM5Q15124 567 aa17.49■□□□□ 0.39
SNRPA1-210ENST00000560383 ZNF365Q70YC5 407 aa17.49■□□□□ 0.39
SNRPA1-210ENST00000560383 CCDC82Q8N4S0 544 aa17.49■□□□□ 0.39
SNRPA1-210ENST00000560383 BRF1Q92994 677 aa17.49■□□□□ 0.39
SNRPA1-210ENST00000560383 TRPV6Q9H1D0 765 aa17.49■□□□□ 0.39
SNRPA1-210ENST00000560383 UMODL1Q5DID0 1318 aa17.48■□□□□ 0.39
SNRPA1-210ENST00000560383 GBF1Q92538 1859 aa17.48■□□□□ 0.39
SNRPA1-210ENST00000560383 GOLGA8AA7E2F4 631 aa17.48■□□□□ 0.39
SNRPA1-210ENST00000560383 GOLGA8BA8MQT2 603 aa17.48■□□□□ 0.39
SNRPA1-210ENST00000560383 RGS20O76081 388 aa17.48■□□□□ 0.39
SNRPA1-210ENST00000560383 MYL3P08590 195 aa17.48■□□□□ 0.39
SNRPA1-210ENST00000560383 CASTP20810 708 aaKnown RBP17.48■□□□□ 0.39
SNRPA1-210ENST00000560383 CDC27P30260 824 aa17.48■□□□□ 0.39
SNRPA1-210ENST00000560383 FGD1P98174 961 aa17.48■□□□□ 0.39
SNRPA1-210ENST00000560383 PTPN11Q06124 597 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms