RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 PFKFB1P16118 471 aa6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 CKAP4Q07065 602 aaKnown RBP6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 PPFIA1Q13136 1202 aa6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 G3BP1Q13283 466 aaKnown RBP eCLIP6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 DRP2Q13474 957 aa6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 TRIM14Q14142 442 aa6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 SLC39A14Q15043 492 aa6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 MCMDC2Q4G0Z9 681 aa6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 ANO1Q5XXA6 986 aa6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 ZNF662Q6ZS27 426 aa6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 MICALCLQ6ZW33 695 aa6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 B4GALNT4Q76KP1 1039 aa6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 YTHDF3Q7Z739 585 aaKnown RBP6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 PRPF38AQ8NAV1 312 aaKnown RBP6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 CCDC148Q8NFR7 591 aa6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 DPF2Q92785 391 aa6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 SMARCC1Q92922 1105 aaPredicted RBP6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 FMNL2Q96PY5 1086 aa6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 NAPGQ99747 312 aaPredicted RBP6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 BICC1Q9H694 974 aaKnown RBP6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 SRA1Q9HD15 236 aaKnown RBP6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 HELLSQ9NRZ9 838 aa6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 RBM28Q9NW13 759 aaKnown RBP6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 RAI14Q9P0K7 980 aa6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 BCCIPQ9P287 314 aaKnown RBP eCLIP6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 KCNMB2Q9Y691 235 aa6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 CDHR2Q9BYE9 1310 aa6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 CAMTA1Q9Y6Y1 1673 aa6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 A0A1B0GTH6 734 aa6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 EREGO14944 169 aa6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 HYAL3O43820 417 aaPredicted RBP6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 XYLBO75191 536 aa6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 SASH1O94885 1247 aa6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 CYP21A2P08686 494 aa6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 HNRNPH1P31943 449 aaKnown RBP6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 ARHGAP25P42331 645 aa6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 SYKP43405 635 aa6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 USP14P54578 494 aa6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 VSNL1P62760 191 aa6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 PTPN12Q05209 780 aaKnown RBP6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 PAK2Q13177 524 aa6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 NT5DC1Q5TFE4 455 aa6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 TTC39BQ5VTQ0 682 aaPredicted RBP6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 XKR5Q6UX68 686 aa6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 SYNE3Q6ZMZ3 975 aa6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 TOGARAM2Q6ZUX3 1019 aa6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 ZNF589Q86UQ0 364 aaPredicted RBP6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 CNGA4Q8IV77 575 aa6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 C1orf127Q8N9H9 656 aa6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 FAM76AQ8TAV0 307 aa6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 C7orf43Q8WVR3 580 aa6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 CABS1Q96KC9 395 aa6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 CTAGE1Q96RT6 745 aa6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 ZIC5Q96T25 663 aa6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 PNKPQ96T60 521 aa6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 KRTAP4-2Q9BYR5 136 aa6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 ZSWIM4Q9H7M6 989 aa6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 TIMMDC1Q9NPL8 285 aa6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 INTS13Q9NVM9 706 aa6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 PHF24Q9UPV7 400 aa6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 TMA7Q9Y2S6 64 aaKnown RBP6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 GPC6Q9Y625 555 aaPredicted RBP6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 PRR36Q9H6K5 1346 aa6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 TMEM94Q12767 1356 aa6.69□□□□□ -1.34
SNRPA1-209ENST00000560307 MYO5AQ9Y4I1 1855 aaKnown RBP6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 BCL9LQ86UU0 1499 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 NFAT5O94916 1531 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 LRRIQ3A6PVS8 624 aaPredicted RBP6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 SPATA31C2B4DYI2 1134 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 TMEM232C9JQI7 657 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 EXOC5O00471 708 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 CHUKO15111 745 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 SYF2O95926 243 aaKnown RBP6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 EPB41P11171 864 aaKnown RBP6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 ATP1A3P13637 1013 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 ATP4AP20648 1035 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 PDIA3P30101 505 aaKnown RBP6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 PBX1P40424 430 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 DGKGP49619 791 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 EIF4A1P60842 406 aaKnown RBP6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 AMPD2Q01433 879 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 APBA1Q02410 837 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 CEBPZQ03701 1054 aaKnown RBP6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 ITIH3Q06033 890 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 STIM1Q13586 685 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 NEDD9Q14511 834 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 NR1I3Q14994 352 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 HSP90AB2PQ58FF8 381 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 NBPF6Q5VWK0 638 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 RESP18Q5W5W9 173 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 IQCEQ6IPM2 695 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 NOP9Q86U38 636 aaKnown RBP6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 TAX1BP1Q86VP1 789 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 TMTC1Q8IUR5 882 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 CCDC50Q8IVM0 306 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 LINS1Q8NG48 757 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 MAGEC3Q8TD91 643 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 COG1Q8WTW3 980 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 TBC1D22AQ8WUA7 517 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 SYTL4Q96C24 671 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms