RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 ATG9AQ7Z3C6 839 aa8.37□□□□□ -1.07
ZEB1-216ENST00000559496 DEFB132Q7Z7B7 95 aa8.37□□□□□ -1.07
ZEB1-216ENST00000559496 COL23A1Q86Y22 540 aaPredicted RBP8.37□□□□□ -1.07
ZEB1-216ENST00000559496 CNBD1Q8NA66 436 aa8.37□□□□□ -1.07
ZEB1-216ENST00000559496 RGS22Q8NE09 1264 aa8.37□□□□□ -1.07
ZEB1-216ENST00000559496 GPATCH3Q96I76 525 aa8.37□□□□□ -1.07
ZEB1-216ENST00000559496 NECAB3Q96P71 396 aaPredicted RBP8.37□□□□□ -1.07
ZEB1-216ENST00000559496 PUS3Q9BZE2 481 aaKnown RBP8.37□□□□□ -1.07
ZEB1-216ENST00000559496 CEP44Q9C0F1 390 aa8.37□□□□□ -1.07
ZEB1-216ENST00000559496 STAP2Q9UGK3 403 aa8.37□□□□□ -1.07
ZEB1-216ENST00000559496 WWC3Q9ULE0 1092 aa8.37□□□□□ -1.07
ZEB1-216ENST00000559496 PPM1HQ9ULR3 514 aa8.37□□□□□ -1.07
ZEB1-216ENST00000559496 EP400Q96L91 3159 aa8.37□□□□□ -1.07
ZEB1-216ENST00000559496 PNPLA7Q6ZV29 1317 aa8.37□□□□□ -1.07
ZEB1-216ENST00000559496 LRP5O75197 1615 aa8.37□□□□□ -1.07
ZEB1-216ENST00000559496 DYNC1LI2O43237 492 aaPredicted RBP8.36□□□□□ -1.07
ZEB1-216ENST00000559496 PRNPP04156 253 aa8.36□□□□□ -1.07
ZEB1-216ENST00000559496 SF3B3Q15393 1217 aaKnown RBP8.36□□□□□ -1.07
ZEB1-216ENST00000559496 TNNI3KQ59H18 835 aa8.36□□□□□ -1.07
ZEB1-216ENST00000559496 AXDND1Q5T1B0 1012 aaPredicted RBP8.36□□□□□ -1.07
ZEB1-216ENST00000559496 MAP1SQ66K74 1059 aaPredicted RBP8.36□□□□□ -1.07
ZEB1-216ENST00000559496 LDHAL6AQ6ZMR3 332 aa8.36□□□□□ -1.07
ZEB1-216ENST00000559496 ZNF765Q7L2R6 523 aa8.36□□□□□ -1.07
ZEB1-216ENST00000559496 EAF2Q96CJ1 260 aaPredicted RBP8.36□□□□□ -1.07
ZEB1-216ENST00000559496 CNNM1Q9NRU3 951 aa8.36□□□□□ -1.07
ZEB1-216ENST00000559496 ZHX1Q9UKY1 873 aaPredicted RBP8.36□□□□□ -1.07
ZEB1-216ENST00000559496 FPGT-TNNI3KV9GXZ4 949 aa8.36□□□□□ -1.07
ZEB1-216ENST00000559496 TTC41PQ6P2S7 1318 aa8.36□□□□□ -1.07
ZEB1-216ENST00000559496 DYNC1I1O14576 645 aa8.35□□□□□ -1.07
ZEB1-216ENST00000559496 ZNF609O15014 1411 aa8.35□□□□□ -1.07
ZEB1-216ENST00000559496 SERPINB2P05120 415 aa8.35□□□□□ -1.07
ZEB1-216ENST00000559496 ZSCAN20P17040 1043 aaPredicted RBP8.35□□□□□ -1.07
ZEB1-216ENST00000559496 PTMSP20962 102 aa8.35□□□□□ -1.07
ZEB1-216ENST00000559496 TM4SF1P30408 202 aa8.35□□□□□ -1.07
ZEB1-216ENST00000559496 IGHMBP2P38935 993 aaKnown RBP8.35□□□□□ -1.07
ZEB1-216ENST00000559496 ST5P78524 1137 aa8.35□□□□□ -1.07
ZEB1-216ENST00000559496 ZNF252P-AS1Q0IIN9 211 aa8.35□□□□□ -1.07
ZEB1-216ENST00000559496 SLC15A2Q16348 729 aa8.35□□□□□ -1.07
ZEB1-216ENST00000559496 RIC1Q4ADV7 1423 aa8.35□□□□□ -1.07
ZEB1-216ENST00000559496 METTL24Q5JXM2 366 aa8.35□□□□□ -1.07
ZEB1-216ENST00000559496 SMYD4Q8IYR2 804 aaPredicted RBP8.35□□□□□ -1.07
ZEB1-216ENST00000559496 NLGN1Q8N2Q7 840 aa8.35□□□□□ -1.07
ZEB1-216ENST00000559496 CDC5LQ99459 802 aaKnown RBP8.35□□□□□ -1.07
ZEB1-216ENST00000559496 MPHOSPH8Q99549 860 aa8.35□□□□□ -1.07
ZEB1-216ENST00000559496 CCDC94Q9BW85 323 aaPredicted RBP8.35□□□□□ -1.07
ZEB1-216ENST00000559496 CCDC8Q9H0W5 538 aaPredicted RBP8.35□□□□□ -1.07
ZEB1-216ENST00000559496 GPR108Q9NPR9 543 aa8.35□□□□□ -1.07
ZEB1-216ENST00000559496 ECHDC1Q9NTX5 307 aa8.35□□□□□ -1.07
ZEB1-216ENST00000559496 CCDC39Q9UFE4 941 aa8.35□□□□□ -1.07
ZEB1-216ENST00000559496 SAMM50Q9Y512 469 aa8.35□□□□□ -1.07
ZEB1-216ENST00000559496 CASZ1Q86V15 1759 aa8.35□□□□□ -1.07
ZEB1-216ENST00000559496 QSER1Q2KHR3 1735 aa8.35□□□□□ -1.07
ZEB1-216ENST00000559496 POLRMTO00411 1230 aaKnown RBP8.35□□□□□ -1.07
ZEB1-216ENST00000559496 ERC2O15083 957 aa8.35□□□□□ -1.07
ZEB1-216ENST00000559496 CDC45O75419 566 aa8.35□□□□□ -1.07
ZEB1-216ENST00000559496 GLRX3O76003 335 aaKnown RBP8.35□□□□□ -1.07
ZEB1-216ENST00000559496 SDSP20132 328 aa8.35□□□□□ -1.07
ZEB1-216ENST00000559496 CDK11BP21127 795 aaKnown RBP8.35□□□□□ -1.07
ZEB1-216ENST00000559496 BMP6P22004 513 aa8.35□□□□□ -1.07
ZEB1-216ENST00000559496 DDR1Q08345 913 aa8.35□□□□□ -1.07
ZEB1-216ENST00000559496 TTLL4Q14679 1199 aa8.35□□□□□ -1.07
ZEB1-216ENST00000559496 PRR5LQ6MZQ0 368 aa8.35□□□□□ -1.07
ZEB1-216ENST00000559496 PI4K2BQ8TCG2 481 aa8.35□□□□□ -1.07
ZEB1-216ENST00000559496 FRMD6Q96NE9 622 aa8.35□□□□□ -1.07
ZEB1-216ENST00000559496 CBX8Q9HC52 389 aa8.35□□□□□ -1.07
ZEB1-216ENST00000559496 BSDC1Q9NW68 430 aaPredicted RBP8.35□□□□□ -1.07
ZEB1-216ENST00000559496 PCOLCE2Q9UKZ9 415 aa8.35□□□□□ -1.07
ZEB1-216ENST00000559496 ANGEL1Q9UNK9 670 aaKnown RBP8.35□□□□□ -1.07
ZEB1-216ENST00000559496 RIPOR2Q9Y4F9 1068 aa8.35□□□□□ -1.07
ZEB1-216ENST00000559496 TNRC6CQ9HCJ0 1690 aaKnown RBP8.34□□□□□ -1.07
ZEB1-216ENST00000559496 SPEF2Q9C093 1822 aa8.34□□□□□ -1.07
ZEB1-216ENST00000559496 ENC1O14682 589 aa8.34□□□□□ -1.07
ZEB1-216ENST00000559496 RNGTTO60942 597 aaKnown RBP8.34□□□□□ -1.07
ZEB1-216ENST00000559496 CYP27C1Q4G0S4 372 aa8.34□□□□□ -1.07
ZEB1-216ENST00000559496 ZC3H12AQ5D1E8 599 aaKnown RBP8.34□□□□□ -1.07
ZEB1-216ENST00000559496 NFXL1Q6ZNB6 911 aa8.34□□□□□ -1.07
ZEB1-216ENST00000559496 ANKRD18AQ8IVF6 992 aa8.34□□□□□ -1.07
ZEB1-216ENST00000559496 NEUROD6Q96NK8 337 aa8.34□□□□□ -1.07
ZEB1-216ENST00000559496 C12orf49Q9H741 205 aa8.34□□□□□ -1.07
ZEB1-216ENST00000559496 LRRC4CQ9HCJ2 640 aa8.34□□□□□ -1.07
ZEB1-216ENST00000559496 CACNA2D2Q9NY47 1150 aa8.34□□□□□ -1.07
ZEB1-216ENST00000559496 DBNLQ9UJU6 430 aaKnown RBP8.34□□□□□ -1.07
ZEB1-216ENST00000559496 MROH5Q6ZUA9 1318 aa8.33□□□□□ -1.08
ZEB1-216ENST00000559496 A0A1B0GUL7 405 aa8.33□□□□□ -1.08
ZEB1-216ENST00000559496 P4HBP07237 508 aaKnown RBP8.33□□□□□ -1.08
ZEB1-216ENST00000559496 MMP10P09238 476 aa8.33□□□□□ -1.08
ZEB1-216ENST00000559496 TAL1P17542 331 aaPredicted RBP8.33□□□□□ -1.08
ZEB1-216ENST00000559496 ERVK-24P63145 666 aa8.33□□□□□ -1.08
ZEB1-216ENST00000559496 ATP2B3Q16720 1220 aa8.33□□□□□ -1.08
ZEB1-216ENST00000559496 CASC1Q6TDU7 716 aa8.33□□□□□ -1.08
ZEB1-216ENST00000559496 DDX46Q7L014 1031 aaKnown RBP8.33□□□□□ -1.08
ZEB1-216ENST00000559496 GPBAR1Q8TDU6 330 aa8.33□□□□□ -1.08
ZEB1-216ENST00000559496 ZNF622Q969S3 477 aaKnown RBP eCLIP8.33□□□□□ -1.08
ZEB1-216ENST00000559496 RILPL2Q969X0 211 aa8.33□□□□□ -1.08
ZEB1-216ENST00000559496 FAM8A1Q9UBU6 413 aa8.33□□□□□ -1.08
ZEB1-216ENST00000559496 ZC3H7BQ9UGR2 993 aaKnown RBP8.33□□□□□ -1.08
ZEB1-216ENST00000559496 PDE8BO95263 885 aa8.32□□□□□ -1.08
ZEB1-216ENST00000559496 MAP4K4O95819 1239 aaPredicted RBP8.32□□□□□ -1.08
ZEB1-216ENST00000559496 LDHBP07195 334 aaKnown RBP8.32□□□□□ -1.08
ZEB1-216ENST00000559496 TIMM10P62072 90 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms