RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 CNPY2Q9Y2B0 182 aa13.14□□□□□ -0.31
SNX1-204ENST00000559061 TELO2Q9Y4R8 837 aa13.14□□□□□ -0.31
SNX1-204ENST00000559061 PCDHA8Q9Y5H6 950 aa13.14□□□□□ -0.31
SNX1-204ENST00000559061 DNAH12Q6ZR08 3092 aa13.13□□□□□ -0.31
SNX1-204ENST00000559061 PGK1P00558 417 aa13.13□□□□□ -0.31
SNX1-204ENST00000559061 COL6A1P12109 1028 aa13.13□□□□□ -0.31
SNX1-204ENST00000559061 SP2Q02086 613 aa13.13□□□□□ -0.31
SNX1-204ENST00000559061 PDE4DQ08499 809 aa13.13□□□□□ -0.31
SNX1-204ENST00000559061 EARS2Q5JPH6 523 aaKnown RBP13.13□□□□□ -0.31
SNX1-204ENST00000559061 TRIM22Q8IYM9 498 aa13.13□□□□□ -0.31
SNX1-204ENST00000559061 DAGLBQ8NCG7 672 aa13.13□□□□□ -0.31
SNX1-204ENST00000559061 KLHDC9Q8NEP7 349 aa13.13□□□□□ -0.31
SNX1-204ENST00000559061 OXER1Q8TDS5 423 aa13.13□□□□□ -0.31
SNX1-204ENST00000559061 TNFRSF25Q93038 417 aa13.13□□□□□ -0.31
SNX1-204ENST00000559061 ZSCAN31Q96LW9 406 aaPredicted RBP13.13□□□□□ -0.31
SNX1-204ENST00000559061 TMEM106CQ9BVX2 250 aa13.13□□□□□ -0.31
SNX1-204ENST00000559061 ANO3Q9BYT9 981 aa13.13□□□□□ -0.31
SNX1-204ENST00000559061 SH3GLB2Q9NR46 395 aa13.13□□□□□ -0.31
SNX1-204ENST00000559061 SH2B1Q9NRF2 756 aaPredicted RBP13.13□□□□□ -0.31
SNX1-204ENST00000559061 ST18O60284 1047 aa13.12□□□□□ -0.31
SNX1-204ENST00000559061 CDKL5O76039 1030 aa13.12□□□□□ -0.31
SNX1-204ENST00000559061 MYCLP12524 364 aaPredicted RBP13.12□□□□□ -0.31
SNX1-204ENST00000559061 ITGB5P18084 799 aa13.12□□□□□ -0.31
SNX1-204ENST00000559061 LRRC41Q15345 812 aa13.12□□□□□ -0.31
SNX1-204ENST00000559061 IFFO2Q5TF58 517 aa13.12□□□□□ -0.31
SNX1-204ENST00000559061 JAKMIP3Q5VZ66 844 aa13.12□□□□□ -0.31
SNX1-204ENST00000559061 PCNX4Q63HM2 1172 aa13.12□□□□□ -0.31
SNX1-204ENST00000559061 CYP2W1Q8TAV3 490 aa13.12□□□□□ -0.31
SNX1-204ENST00000559061 INPP4AQ96PE3 977 aaPredicted RBP13.12□□□□□ -0.31
SNX1-204ENST00000559061 FAM184BQ9ULE4 1060 aa13.12□□□□□ -0.31
SNX1-204ENST00000559061 FAM205CA6NFA0 338 aa13.11□□□□□ -0.31
SNX1-204ENST00000559061 MSCO60682 206 aa13.11□□□□□ -0.31
SNX1-204ENST00000559061 DUSP11O75319 330 aaKnown RBP13.11□□□□□ -0.31
SNX1-204ENST00000559061 EIF3JO75822 258 aaKnown RBP13.11□□□□□ -0.31
SNX1-204ENST00000559061 SREBF1P36956 1147 aa13.11□□□□□ -0.31
SNX1-204ENST00000559061 MRPL12P52815 198 aaKnown RBP13.11□□□□□ -0.31
SNX1-204ENST00000559061 GJA9P57773 515 aa13.11□□□□□ -0.31
SNX1-204ENST00000559061 AKAP17AQ02040 695 aaKnown RBP13.11□□□□□ -0.31
SNX1-204ENST00000559061 TNFAIP2Q03169 654 aa13.11□□□□□ -0.31
SNX1-204ENST00000559061 ARHGAP1Q07960 439 aa13.11□□□□□ -0.31
SNX1-204ENST00000559061 CUL4AQ13619 759 aa13.11□□□□□ -0.31
SNX1-204ENST00000559061 STXBP2Q15833 593 aa13.11□□□□□ -0.31
SNX1-204ENST00000559061 LY6KQ17RY6 165 aa13.11□□□□□ -0.31
SNX1-204ENST00000559061 DUSP28Q4G0W2 176 aa13.11□□□□□ -0.31
SNX1-204ENST00000559061 CPLX2Q6PUV4 134 aaKnown RBP13.11□□□□□ -0.31
SNX1-204ENST00000559061 SEPT14Q6ZU15 432 aa13.11□□□□□ -0.31
SNX1-204ENST00000559061 LLPHQ9BRT6 129 aaKnown RBP13.11□□□□□ -0.31
SNX1-204ENST00000559061 ALG1Q9BT22 464 aa13.11□□□□□ -0.31
SNX1-204ENST00000559061 WDR11Q9BZH6 1224 aa13.11□□□□□ -0.31
SNX1-204ENST00000559061 XPNPEP3Q9NQH7 507 aa13.11□□□□□ -0.31
SNX1-204ENST00000559061 DDX41Q9UJV9 622 aaKnown RBP13.11□□□□□ -0.31
SNX1-204ENST00000559061 PCDHA4Q9UN74 947 aa13.11□□□□□ -0.31
SNX1-204ENST00000559061 UBIAD1Q9Y5Z9 338 aa13.11□□□□□ -0.31
SNX1-204ENST00000559061 IGLV3-22A0A075B6J6 115 aa13.1□□□□□ -0.31
SNX1-204ENST00000559061 FARP2O94887 1054 aaPredicted RBP13.1□□□□□ -0.31
SNX1-204ENST00000559061 TFRCP02786 760 aaKnown RBP13.1□□□□□ -0.31
SNX1-204ENST00000559061 RARBP10826 455 aa13.1□□□□□ -0.31
SNX1-204ENST00000559061 UBA1P22314 1058 aaKnown RBP13.1□□□□□ -0.31
SNX1-204ENST00000559061 CST5P28325 142 aaPredicted RBP13.1□□□□□ -0.31
SNX1-204ENST00000559061 CCND2P30279 289 aa13.1□□□□□ -0.31
SNX1-204ENST00000559061 FOSBP53539 338 aa13.1□□□□□ -0.31
SNX1-204ENST00000559061 BEX3Q00994 111 aa13.1□□□□□ -0.31
SNX1-204ENST00000559061 AP3B2Q13367 1082 aa13.1□□□□□ -0.31
SNX1-204ENST00000559061 IQSEC1Q6DN90 963 aa13.1□□□□□ -0.31
SNX1-204ENST00000559061 TLK2Q86UE8 772 aa13.1□□□□□ -0.31
SNX1-204ENST00000559061 TEX2Q8IWB9 1127 aa13.1□□□□□ -0.31
SNX1-204ENST00000559061 REXO1Q8N1G1 1221 aaKnown RBP13.1□□□□□ -0.31
SNX1-204ENST00000559061 CCDC148Q8NFR7 591 aa13.1□□□□□ -0.31
SNX1-204ENST00000559061 LENG9Q96B70 501 aa13.1□□□□□ -0.31
SNX1-204ENST00000559061 C6orf50Q9HD87 102 aa13.1□□□□□ -0.31
SNX1-204ENST00000559061 RTEL1Q9NZ71 1219 aa13.1□□□□□ -0.31
SNX1-204ENST00000559061 SCN10AQ9Y5Y9 1956 aa13.1□□□□□ -0.31
SNX1-204ENST00000559061 FAM86B1E9PN63 330 aa13.09□□□□□ -0.31
SNX1-204ENST00000559061 DNM1LO00429 736 aa13.09□□□□□ -0.31
SNX1-204ENST00000559061 WNT7AO00755 349 aa13.09□□□□□ -0.31
SNX1-204ENST00000559061 ATP9AO75110 1047 aa13.09□□□□□ -0.31
SNX1-204ENST00000559061 FAM86B2P0C5J1 330 aa13.09□□□□□ -0.31
SNX1-204ENST00000559061 ICAM3P32942 547 aa13.09□□□□□ -0.31
SNX1-204ENST00000559061 NLRP5P59047 1200 aa13.09□□□□□ -0.31
SNX1-204ENST00000559061 ARHGAP4P98171 946 aa13.09□□□□□ -0.31
SNX1-204ENST00000559061 BLIDQ8IZY5 108 aa13.09□□□□□ -0.31
SNX1-204ENST00000559061 FAM177A1Q8N128 213 aaPredicted RBP13.09□□□□□ -0.31
SNX1-204ENST00000559061 ANKLE1Q8NAG6 615 aa13.09□□□□□ -0.31
SNX1-204ENST00000559061 IL27Q8NEV9 243 aa13.09□□□□□ -0.31
SNX1-204ENST00000559061 SCFD2Q8WU76 684 aa13.09□□□□□ -0.31
SNX1-204ENST00000559061 PAWRQ96IZ0 340 aaKnown RBP13.09□□□□□ -0.31
SNX1-204ENST00000559061 PCDH10Q9P2E7 1040 aa13.09□□□□□ -0.31
SNX1-204ENST00000559061 SPDYE3A6NKU9 549 aa13.08□□□□□ -0.32
SNX1-204ENST00000559061 SPATA31C2B4DYI2 1134 aa13.08□□□□□ -0.32
SNX1-204ENST00000559061 FOSP01100 380 aaPredicted RBP13.08□□□□□ -0.32
SNX1-204ENST00000559061 CYP3A4P08684 503 aa13.08□□□□□ -0.32
SNX1-204ENST00000559061 TXNP10599 105 aaKnown RBP13.08□□□□□ -0.32
SNX1-204ENST00000559061 KCNA2P16389 499 aa13.08□□□□□ -0.32
SNX1-204ENST00000559061 GNA11P29992 359 aa13.08□□□□□ -0.32
SNX1-204ENST00000559061 NR5A1Q13285 461 aa13.08□□□□□ -0.32
SNX1-204ENST00000559061 KRT40Q6A162 431 aa13.08□□□□□ -0.32
SNX1-204ENST00000559061 CCDC12Q8WUD4 166 aaPredicted RBP13.08□□□□□ -0.32
SNX1-204ENST00000559061 SNX21Q969T3 373 aa13.08□□□□□ -0.32
SNX1-204ENST00000559061 PHF24Q9UPV7 400 aa13.08□□□□□ -0.32
SNX1-204ENST00000559061 Q9Y3F1 56 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms