RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 DUSP11O75319 330 aaKnown RBP13.92□□□□□ -0.18
TPM1-216ENST00000558910 MYCLP12524 364 aaPredicted RBP13.92□□□□□ -0.18
TPM1-216ENST00000558910 MAGEA10P43363 369 aaPredicted RBP13.92□□□□□ -0.18
TPM1-216ENST00000558910 ACLYP53396 1101 aa13.92□□□□□ -0.18
TPM1-216ENST00000558910 PROX2Q3B8N5 592 aa13.92□□□□□ -0.18
TPM1-216ENST00000558910 ARHGEF16Q5VV41 709 aa13.92□□□□□ -0.18
TPM1-216ENST00000558910 TAPT1Q6NXT6 567 aa13.92□□□□□ -0.18
TPM1-216ENST00000558910 TLK2Q86UE8 772 aa13.92□□□□□ -0.18
TPM1-216ENST00000558910 SYTL5Q8TDW5 730 aaPredicted RBP13.92□□□□□ -0.18
TPM1-216ENST00000558910 COPS5Q92905 334 aa13.92□□□□□ -0.18
TPM1-216ENST00000558910 JAKMIP1Q96N16 626 aaKnown RBP13.92□□□□□ -0.18
TPM1-216ENST00000558910 STARD7Q9NQZ5 370 aa13.92□□□□□ -0.18
TPM1-216ENST00000558910 PRKAG2Q9UGJ0 569 aa13.92□□□□□ -0.18
TPM1-216ENST00000558910 TRIOBPQ9H2D6 2365 aa13.91□□□□□ -0.18
TPM1-216ENST00000558910 ASGR1P07306 291 aa13.91□□□□□ -0.18
TPM1-216ENST00000558910 TLE2Q04725 743 aa13.91□□□□□ -0.18
TPM1-216ENST00000558910 SYNE3Q6ZMZ3 975 aa13.91□□□□□ -0.18
TPM1-216ENST00000558910 SH3RF1Q7Z6J0 888 aa13.91□□□□□ -0.18
TPM1-216ENST00000558910 MCF2L2Q86YR7 1114 aa13.91□□□□□ -0.18
TPM1-216ENST00000558910 TMEM87BQ96K49 555 aa13.91□□□□□ -0.18
TPM1-216ENST00000558910 RMDN3Q96TC7 470 aa13.91□□□□□ -0.18
TPM1-216ENST00000558910 WDR11Q9BZH6 1224 aa13.91□□□□□ -0.18
TPM1-216ENST00000558910 PNMA2Q9UL42 364 aa13.91□□□□□ -0.18
TPM1-216ENST00000558910 PHF24Q9UPV7 400 aa13.91□□□□□ -0.18
TPM1-216ENST00000558910 RANBP2P49792 3224 aaKnown RBP13.9□□□□□ -0.18
TPM1-216ENST00000558910 BHMG1C9JSJ3 638 aaPredicted RBP13.9□□□□□ -0.18
TPM1-216ENST00000558910 PPFIA3O75145 1194 aa13.9□□□□□ -0.18
TPM1-216ENST00000558910 DDAH1O94760 285 aa13.9□□□□□ -0.18
TPM1-216ENST00000558910 MYL3P08590 195 aa13.9□□□□□ -0.18
TPM1-216ENST00000558910 KIF5BP33176 963 aa13.9□□□□□ -0.18
TPM1-216ENST00000558910 CXCL17Q6UXB2 119 aa13.9□□□□□ -0.18
TPM1-216ENST00000558910 SRBD1Q8N5C6 995 aaKnown RBP13.9□□□□□ -0.18
TPM1-216ENST00000558910 OR6J1Q8NGC5 347 aa13.9□□□□□ -0.18
TPM1-216ENST00000558910 RRP36Q96EU6 259 aaKnown RBP13.9□□□□□ -0.18
TPM1-216ENST00000558910 MPHOSPH6Q99547 160 aaKnown RBP13.9□□□□□ -0.18
TPM1-216ENST00000558910 VTA1Q9NP79 307 aa13.9□□□□□ -0.18
TPM1-216ENST00000558910 PNMA6FA0A0J9YX94 578 aa13.89□□□□□ -0.19
TPM1-216ENST00000558910 KLF18A0A0U1RQI7 1052 aa13.89□□□□□ -0.19
TPM1-216ENST00000558910 OPLAHO14841 1288 aa13.89□□□□□ -0.19
TPM1-216ENST00000558910 GJA9P57773 515 aa13.89□□□□□ -0.19
TPM1-216ENST00000558910 PSMC6P62333 389 aa13.89□□□□□ -0.19
TPM1-216ENST00000558910 APOBRQ0VD83 1088 aa13.89□□□□□ -0.19
TPM1-216ENST00000558910 FSCN1Q16658 493 aaKnown RBP13.89□□□□□ -0.19
TPM1-216ENST00000558910 TSR1Q2NL82 804 aaKnown RBP13.89□□□□□ -0.19
TPM1-216ENST00000558910 DHX32Q7L7V1 743 aaKnown RBP13.89□□□□□ -0.19
TPM1-216ENST00000558910 KLHDC9Q8NEP7 349 aa13.89□□□□□ -0.19
TPM1-216ENST00000558910 GLT1D1Q96MS3 346 aa13.89□□□□□ -0.19
TPM1-216ENST00000558910 LBHD1Q9BQE6 289 aaPredicted RBP13.89□□□□□ -0.19
TPM1-216ENST00000558910 UBE2OQ9C0C9 1292 aaKnown RBP13.89□□□□□ -0.19
TPM1-216ENST00000558910 RIOX1Q9H6W3 641 aa13.89□□□□□ -0.19
TPM1-216ENST00000558910 SEC63Q9UGP8 760 aaKnown RBP13.89□□□□□ -0.19
TPM1-216ENST00000558910 BRPF3Q9ULD4 1205 aa13.89□□□□□ -0.19
TPM1-216ENST00000558910 SNX14Q9Y5W7 946 aa13.89□□□□□ -0.19
TPM1-216ENST00000558910 LCTP09848 1927 aa13.89□□□□□ -0.19
TPM1-216ENST00000558910 GOLGA8AA7E2F4 631 aa13.88□□□□□ -0.19
TPM1-216ENST00000558910 GOLGA8BA8MQT2 603 aa13.88□□□□□ -0.19
TPM1-216ENST00000558910 GCOM1H8Y6P7 765 aaPredicted RBP13.88□□□□□ -0.19
TPM1-216ENST00000558910 MAP3K7O43318 606 aa13.88□□□□□ -0.19
TPM1-216ENST00000558910 ARIH2O95376 493 aa13.88□□□□□ -0.19
TPM1-216ENST00000558910 POLR2MP0CAP2 368 aa13.88□□□□□ -0.19
TPM1-216ENST00000558910 TXNP10599 105 aaKnown RBP13.88□□□□□ -0.19
TPM1-216ENST00000558910 PPP2R5BQ15173 497 aa13.88□□□□□ -0.19
TPM1-216ENST00000558910 LY6KQ17RY6 165 aa13.88□□□□□ -0.19
TPM1-216ENST00000558910 IQSEC1Q6DN90 963 aa13.88□□□□□ -0.19
TPM1-216ENST00000558910 Q6ZUG5 572 aa13.88□□□□□ -0.19
TPM1-216ENST00000558910 TMTC2Q8N394 836 aa13.88□□□□□ -0.19
TPM1-216ENST00000558910 PCSK9Q8NBP7 692 aaKnown RBP13.88□□□□□ -0.19
TPM1-216ENST00000558910 DNERQ8NFT8 737 aa13.88□□□□□ -0.19
TPM1-216ENST00000558910 NSUN6Q8TEA1 469 aaKnown RBP13.88□□□□□ -0.19
TPM1-216ENST00000558910 GPKOWQ92917 476 aaPredicted RBP eCLIP13.88□□□□□ -0.19
TPM1-216ENST00000558910 MTMR8Q96EF0 704 aa13.88□□□□□ -0.19
TPM1-216ENST00000558910 GNEQ9Y223 722 aaKnown RBP13.88□□□□□ -0.19
TPM1-216ENST00000558910 MYH6P13533 1939 aa13.88□□□□□ -0.19
TPM1-216ENST00000558910 TRIM43BA6NCK2 446 aa13.87□□□□□ -0.19
TPM1-216ENST00000558910 B4DLN1 442 aa13.87□□□□□ -0.19
TPM1-216ENST00000558910 CTAGE5O15320 804 aa13.87□□□□□ -0.19
TPM1-216ENST00000558910 ZBTB43O43298 467 aa13.87□□□□□ -0.19
TPM1-216ENST00000558910 REC8O95072 547 aa13.87□□□□□ -0.19
TPM1-216ENST00000558910 CASTP20810 708 aaKnown RBP13.87□□□□□ -0.19
TPM1-216ENST00000558910 LIFRP42702 1097 aa13.87□□□□□ -0.19
TPM1-216ENST00000558910 MRPL12P52815 198 aaKnown RBP13.87□□□□□ -0.19
TPM1-216ENST00000558910 EXOSC10Q01780 885 aaKnown RBP13.87□□□□□ -0.19
TPM1-216ENST00000558910 KRT32Q14532 448 aa13.87□□□□□ -0.19
TPM1-216ENST00000558910 RTN1Q16799 776 aa13.87□□□□□ -0.19
TPM1-216ENST00000558910 USP17L6PQ6QN14 398 aa13.87□□□□□ -0.19
TPM1-216ENST00000558910 BLOC1S2Q6QNY1 142 aa13.87□□□□□ -0.19
TPM1-216ENST00000558910 HEATR3Q7Z4Q2 680 aa13.87□□□□□ -0.19
TPM1-216ENST00000558910 FANCBQ8NB91 859 aa13.87□□□□□ -0.19
TPM1-216ENST00000558910 IL31RAQ8NI17 732 aa13.87□□□□□ -0.19
TPM1-216ENST00000558910 SMARCC2Q8TAQ2 1214 aa13.87□□□□□ -0.19
TPM1-216ENST00000558910 BADQ92934 168 aa13.87□□□□□ -0.19
TPM1-216ENST00000558910 BRF1Q92994 677 aa13.87□□□□□ -0.19
TPM1-216ENST00000558910 TRIM43Q96BQ3 446 aaPredicted RBP13.87□□□□□ -0.19
TPM1-216ENST00000558910 TSEN34Q9BSV6 310 aaKnown RBP13.87□□□□□ -0.19
TPM1-216ENST00000558910 UPF3AQ9H1J1 476 aaKnown RBP13.87□□□□□ -0.19
TPM1-216ENST00000558910 PDLIM7Q9NR12 457 aa13.87□□□□□ -0.19
TPM1-216ENST00000558910 PXMP2Q9NR77 195 aa13.87□□□□□ -0.19
TPM1-216ENST00000558910 TMEM39AQ9NV64 488 aa13.87□□□□□ -0.19
TPM1-216ENST00000558910 MOXD2PA6NHM9 499 aa13.86□□□□□ -0.19
TPM1-216ENST00000558910 ZEB2O60315 1214 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms