RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 LGR4Q9BXB1 951 aa7.95□□□□□ -1.14
LRRC28-209ENST00000558861 FBXL21Q9UKT6 434 aa7.95□□□□□ -1.14
LRRC28-209ENST00000558861 THRAP3Q9Y2W1 955 aaKnown RBP7.95□□□□□ -1.14
LRRC28-209ENST00000558861 MEGF6O75095 1541 aa7.94□□□□□ -1.14
LRRC28-209ENST00000558861 SHISA3A0PJX4 238 aa7.94□□□□□ -1.14
LRRC28-209ENST00000558861 SMARCA5O60264 1052 aaPredicted RBP7.94□□□□□ -1.14
LRRC28-209ENST00000558861 ANKRD39Q53RE8 183 aa7.94□□□□□ -1.14
LRRC28-209ENST00000558861 ARHGAP27Q6ZUM4 889 aa7.94□□□□□ -1.14
LRRC28-209ENST00000558861 ZNF513Q8N8E2 541 aaPredicted RBP7.94□□□□□ -1.14
LRRC28-209ENST00000558861 GFOD1Q9NXC2 390 aa7.94□□□□□ -1.14
LRRC28-209ENST00000558861 ZMYM5Q9UJ78 669 aa7.94□□□□□ -1.14
LRRC28-209ENST00000558861 KCNH3Q9ULD8 1083 aa7.94□□□□□ -1.14
LRRC28-209ENST00000558861 MINPP1Q9UNW1 487 aa7.94□□□□□ -1.14
LRRC28-209ENST00000558861 MRPL42Q9Y6G3 142 aaKnown RBP7.94□□□□□ -1.14
LRRC28-209ENST00000558861 MYBBP1AQ9BQG0 1328 aaKnown RBP7.94□□□□□ -1.14
LRRC28-209ENST00000558861 SRCAPQ6ZRS2 3230 aa7.93□□□□□ -1.14
LRRC28-209ENST00000558861 FAM155AB1AL88 458 aaPredicted RBP7.93□□□□□ -1.14
LRRC28-209ENST00000558861 PPM1GO15355 546 aaPredicted RBP7.93□□□□□ -1.14
LRRC28-209ENST00000558861 ZNF143P52747 638 aaPredicted RBP7.93□□□□□ -1.14
LRRC28-209ENST00000558861 EVA1CP58658 441 aa7.93□□□□□ -1.14
LRRC28-209ENST00000558861 ZNF445P59923 1031 aa7.93□□□□□ -1.14
LRRC28-209ENST00000558861 TCEAL1Q15170 157 aa7.93□□□□□ -1.14
LRRC28-209ENST00000558861 NKPD1Q17RQ9 610 aa7.93□□□□□ -1.14
LRRC28-209ENST00000558861 SV2CQ496J9 727 aa7.93□□□□□ -1.14
LRRC28-209ENST00000558861 TOM1L2Q6ZVM7 507 aa7.93□□□□□ -1.14
LRRC28-209ENST00000558861 ADAT2Q7Z6V5 191 aaKnown RBP7.93□□□□□ -1.14
LRRC28-209ENST00000558861 SPACA3Q8IXA5 215 aa7.93□□□□□ -1.14
LRRC28-209ENST00000558861 LILRB2Q8N423 598 aa7.93□□□□□ -1.14
LRRC28-209ENST00000558861 BRF1Q92994 677 aa7.93□□□□□ -1.14
LRRC28-209ENST00000558861 PPP1R14AQ96A00 147 aa7.93□□□□□ -1.14
LRRC28-209ENST00000558861 LTV1Q96GA3 475 aaPredicted RBP7.93□□□□□ -1.14
LRRC28-209ENST00000558861 GBP3Q9H0R5 595 aa7.93□□□□□ -1.14
LRRC28-209ENST00000558861 WHRNQ9P202 907 aa7.93□□□□□ -1.14
LRRC28-209ENST00000558861 LEMD3Q9Y2U8 911 aa7.93□□□□□ -1.14
LRRC28-209ENST00000558861 PLEKHG2Q9H7P9 1386 aa7.93□□□□□ -1.14
LRRC28-209ENST00000558861 OVOS2A0A0G2JMS6 1433 aa7.93□□□□□ -1.14
LRRC28-209ENST00000558861 RGPD2P0DJD1 1756 aa7.92□□□□□ -1.14
LRRC28-209ENST00000558861 PRR19A6NJB7 356 aa7.92□□□□□ -1.14
LRRC28-209ENST00000558861 CYP26A1O43174 497 aa7.92□□□□□ -1.14
LRRC28-209ENST00000558861 PRAMEF1O95521 474 aa7.92□□□□□ -1.14
LRRC28-209ENST00000558861 IGHA1P01876 353 aa7.92□□□□□ -1.14
LRRC28-209ENST00000558861 CEACAM5P06731 702 aa7.92□□□□□ -1.14
LRRC28-209ENST00000558861 NAT2P11245 290 aa7.92□□□□□ -1.14
LRRC28-209ENST00000558861 ITGA4P13612 1032 aa7.92□□□□□ -1.14
LRRC28-209ENST00000558861 SSRP1Q08945 709 aaKnown RBP7.92□□□□□ -1.14
LRRC28-209ENST00000558861 NMIQ13287 307 aaPredicted RBP7.92□□□□□ -1.14
LRRC28-209ENST00000558861 CNGB1Q14028 1251 aaPredicted RBP7.92□□□□□ -1.14
LRRC28-209ENST00000558861 CPSF6Q16630 551 aaKnown RBP eCLIP7.92□□□□□ -1.14
LRRC28-209ENST00000558861 CCDC184Q52MB2 194 aa7.92□□□□□ -1.14
LRRC28-209ENST00000558861 CDKAL1Q5VV42 579 aa7.92□□□□□ -1.14
LRRC28-209ENST00000558861 PLD6Q8N2A8 252 aaKnown RBP7.92□□□□□ -1.14
LRRC28-209ENST00000558861 NLGN1Q8N2Q7 840 aa7.92□□□□□ -1.14
LRRC28-209ENST00000558861 USHBP1Q8N6Y0 703 aa7.92□□□□□ -1.14
LRRC28-209ENST00000558861 PIWIL2Q8TC59 973 aaKnown RBP7.92□□□□□ -1.14
LRRC28-209ENST00000558861 APBA2Q99767 749 aa7.92□□□□□ -1.14
LRRC28-209ENST00000558861 EPN3Q9H201 632 aa7.92□□□□□ -1.14
LRRC28-209ENST00000558861 KANSL2Q9H9L4 492 aa7.92□□□□□ -1.14
LRRC28-209ENST00000558861 PIM2Q9P1W9 311 aa7.92□□□□□ -1.14
LRRC28-209ENST00000558861 PLAGL2Q9UPG8 496 aa7.92□□□□□ -1.14
LRRC28-209ENST00000558861 SUGT1Q9Y2Z0 365 aa7.92□□□□□ -1.14
LRRC28-209ENST00000558861 PARP4Q9UKK3 1724 aaKnown RBP7.92□□□□□ -1.14
LRRC28-209ENST00000558861 MEIS1O00470 390 aa7.91□□□□□ -1.14
LRRC28-209ENST00000558861 PPM1BO75688 479 aa7.91□□□□□ -1.14
LRRC28-209ENST00000558861 TGFB1P01137 390 aa7.91□□□□□ -1.14
LRRC28-209ENST00000558861 PRSS36Q5K4E3 855 aa7.91□□□□□ -1.14
LRRC28-209ENST00000558861 RNPC3Q96LT9 517 aaKnown RBP7.91□□□□□ -1.14
LRRC28-209ENST00000558861 SEMA6BQ9H3T3 888 aa7.91□□□□□ -1.14
LRRC28-209ENST00000558861 NOL6Q9H6R4 1146 aaKnown RBP7.91□□□□□ -1.14
LRRC28-209ENST00000558861 TMA7Q9Y2S6 64 aaKnown RBP7.91□□□□□ -1.14
LRRC28-209ENST00000558861 ST14Q9Y5Y6 855 aa7.91□□□□□ -1.14
LRRC28-209ENST00000558861 FHOD1Q9Y613 1164 aa7.91□□□□□ -1.14
LRRC28-209ENST00000558861 BCL9O00512 1426 aa7.91□□□□□ -1.14
LRRC28-209ENST00000558861 TNS2Q63HR2 1409 aa7.91□□□□□ -1.14
LRRC28-209ENST00000558861 LRRC37A3O60309 1634 aa7.91□□□□□ -1.14
LRRC28-209ENST00000558861 WNK3Q9BYP7 1800 aa7.91□□□□□ -1.14
LRRC28-209ENST00000558861 KDM2BQ8NHM5 1336 aa7.9□□□□□ -1.14
LRRC28-209ENST00000558861 TLDC2A0PJX2 215 aa7.9□□□□□ -1.14
LRRC28-209ENST00000558861 TBX1O43435 398 aa7.9□□□□□ -1.14
LRRC28-209ENST00000558861 SIGLEC6O43699 453 aa7.9□□□□□ -1.14
LRRC28-209ENST00000558861 ITGAVP06756 1048 aa7.9□□□□□ -1.14
LRRC28-209ENST00000558861 IL2RBP14784 551 aa7.9□□□□□ -1.14
LRRC28-209ENST00000558861 HOXA10P31260 410 aaPredicted RBP7.9□□□□□ -1.14
LRRC28-209ENST00000558861 NOL9Q5SY16 702 aaKnown RBP7.9□□□□□ -1.14
LRRC28-209ENST00000558861 ZNF227Q86WZ6 799 aa7.9□□□□□ -1.14
LRRC28-209ENST00000558861 FIBCD1Q8N539 461 aa7.9□□□□□ -1.14
LRRC28-209ENST00000558861 LRRN4CLQ8ND94 238 aa7.9□□□□□ -1.14
LRRC28-209ENST00000558861 SH3TC2Q8TF17 1288 aa7.9□□□□□ -1.14
LRRC28-209ENST00000558861 ZNF669Q96BR6 464 aaPredicted RBP7.9□□□□□ -1.14
LRRC28-209ENST00000558861 DUSP15Q9H1R2 295 aaPredicted RBP7.9□□□□□ -1.14
LRRC28-209ENST00000558861 MKNK2Q9HBH9 465 aa7.9□□□□□ -1.14
LRRC28-209ENST00000558861 LRP2BPQ9P2M1 347 aa7.9□□□□□ -1.14
LRRC28-209ENST00000558861 CGGBP1Q9UFW8 167 aaPredicted RBP7.9□□□□□ -1.14
LRRC28-209ENST00000558861 ZC3H7BQ9UGR2 993 aaKnown RBP7.9□□□□□ -1.14
LRRC28-209ENST00000558861 WASH4PA8MWX3 477 aa7.89□□□□□ -1.15
LRRC28-209ENST00000558861 H3BS24 57 aa7.89□□□□□ -1.15
LRRC28-209ENST00000558861 FOSL1P15407 271 aa7.89□□□□□ -1.15
LRRC28-209ENST00000558861 PPP2R5DQ14738 602 aa7.89□□□□□ -1.15
LRRC28-209ENST00000558861 MARCH10Q8NA82 808 aaPredicted RBP7.89□□□□□ -1.15
LRRC28-209ENST00000558861 HSPA12BQ96MM6 686 aa7.89□□□□□ -1.15
LRRC28-209ENST00000558861 ZDHHC15Q96MV8 337 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms