RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 DIS3Q9Y2L1 958 aaKnown RBP17.91■□□□□ 0.46
LINC01220-201ENST00000558575 MRPL11Q9Y3B7 192 aaKnown RBP17.91■□□□□ 0.46
LINC01220-201ENST00000558575 ASTN1O14525 1302 aa17.91■□□□□ 0.46
LINC01220-201ENST00000558575 PRPF3O43395 683 aaKnown RBP17.9■□□□□ 0.46
LINC01220-201ENST00000558575 PQBP1O60828 265 aaKnown RBP17.9■□□□□ 0.46
LINC01220-201ENST00000558575 CD2BP2O95400 341 aaKnown RBP17.9■□□□□ 0.46
LINC01220-201ENST00000558575 RPS6P62753 249 aaKnown RBP17.9■□□□□ 0.46
LINC01220-201ENST00000558575 TYW1BQ6NUM6 668 aa17.9■□□□□ 0.46
LINC01220-201ENST00000558575 SLC30A10Q6XR72 485 aa17.9■□□□□ 0.46
LINC01220-201ENST00000558575 IL27Q8NEV9 243 aa17.9■□□□□ 0.46
LINC01220-201ENST00000558575 SLKQ9H2G2 1235 aaPredicted RBP17.9■□□□□ 0.46
LINC01220-201ENST00000558575 EPHX3Q9H6B9 360 aa17.9■□□□□ 0.46
LINC01220-201ENST00000558575 COL20A1Q9P218 1284 aa17.9■□□□□ 0.46
LINC01220-201ENST00000558575 HCN4Q9Y3Q4 1203 aa17.9■□□□□ 0.46
LINC01220-201ENST00000558575 CTDNEP1O95476 244 aa17.89■□□□□ 0.45
LINC01220-201ENST00000558575 GHRHRQ02643 423 aa17.89■□□□□ 0.45
LINC01220-201ENST00000558575 RNF207Q6ZRF8 634 aa17.89■□□□□ 0.45
LINC01220-201ENST00000558575 GPKOWQ92917 476 aaPredicted RBP eCLIP17.89■□□□□ 0.45
LINC01220-201ENST00000558575 LIMCH1Q9UPQ0 1083 aa17.89■□□□□ 0.45
LINC01220-201ENST00000558575 DDX49Q9Y6V7 483 aaKnown RBP17.89■□□□□ 0.45
LINC01220-201ENST00000558575 BRWD1Q9NSI6 2320 aa17.88■□□□□ 0.45
LINC01220-201ENST00000558575 IGFBP4P22692 258 aa17.88■□□□□ 0.45
LINC01220-201ENST00000558575 TFF2Q03403 129 aa17.88■□□□□ 0.45
LINC01220-201ENST00000558575 FAAP100Q0VG06 881 aa17.88■□□□□ 0.45
LINC01220-201ENST00000558575 RASIP1Q5U651 963 aa17.88■□□□□ 0.45
LINC01220-201ENST00000558575 WWC2Q6AWC2 1192 aa17.88■□□□□ 0.45
LINC01220-201ENST00000558575 C16orf59Q7L2K0 433 aa17.88■□□□□ 0.45
LINC01220-201ENST00000558575 SYTL5Q8TDW5 730 aaPredicted RBP17.88■□□□□ 0.45
LINC01220-201ENST00000558575 TMEM39AQ9NV64 488 aa17.88■□□□□ 0.45
LINC01220-201ENST00000558575 SLC5A4Q9NY91 659 aa17.88■□□□□ 0.45
LINC01220-201ENST00000558575 CXXC1Q9P0U4 656 aaPredicted RBP17.88■□□□□ 0.45
LINC01220-201ENST00000558575 SEC63Q9UGP8 760 aaKnown RBP17.88■□□□□ 0.45
LINC01220-201ENST00000558575 A0A1W2PQ45 241 aaPredicted RBP17.87■□□□□ 0.45
LINC01220-201ENST00000558575 A0A1W2PQY0 241 aa17.87■□□□□ 0.45
LINC01220-201ENST00000558575 PTPDC1A2A3K4 754 aa17.87■□□□□ 0.45
LINC01220-201ENST00000558575 SNAI1O95863 264 aaPredicted RBP17.87■□□□□ 0.45
LINC01220-201ENST00000558575 CALML3P27482 149 aa17.87■□□□□ 0.45
LINC01220-201ENST00000558575 HSD17B4P51659 736 aa17.87■□□□□ 0.45
LINC01220-201ENST00000558575 PFKFB3Q16875 520 aaPredicted RBP17.87■□□□□ 0.45
LINC01220-201ENST00000558575 MAMDC4Q6UXC1 1216 aa17.87■□□□□ 0.45
LINC01220-201ENST00000558575 ZNF467Q7Z7K2 595 aaPredicted RBP17.87■□□□□ 0.45
LINC01220-201ENST00000558575 MCF2L2Q86YR7 1114 aa17.87■□□□□ 0.45
LINC01220-201ENST00000558575 GTF3C6Q969F1 213 aa17.87■□□□□ 0.45
LINC01220-201ENST00000558575 TAAR1Q96RJ0 339 aa17.87■□□□□ 0.45
LINC01220-201ENST00000558575 TINF2Q9BSI4 451 aa17.87■□□□□ 0.45
LINC01220-201ENST00000558575 SLC26A6Q9BXS9 759 aa17.87■□□□□ 0.45
LINC01220-201ENST00000558575 MCM3APO60318 1980 aa17.87■□□□□ 0.45
LINC01220-201ENST00000558575 STXBP3O00186 592 aa17.86■□□□□ 0.45
LINC01220-201ENST00000558575 CFBP00751 764 aa17.86■□□□□ 0.45
LINC01220-201ENST00000558575 KCNQ1P51787 676 aa17.86■□□□□ 0.45
LINC01220-201ENST00000558575 TRAF1Q13077 416 aa17.86■□□□□ 0.45
LINC01220-201ENST00000558575 TMEM240Q5SV17 173 aa17.86■□□□□ 0.45
LINC01220-201ENST00000558575 HEATR3Q7Z4Q2 680 aa17.86■□□□□ 0.45
LINC01220-201ENST00000558575 RNF26Q9BY78 433 aaPredicted RBP17.86■□□□□ 0.45
LINC01220-201ENST00000558575 MAF1Q9H063 256 aa17.86■□□□□ 0.45
LINC01220-201ENST00000558575 XPNPEP3Q9NQH7 507 aa17.86■□□□□ 0.45
LINC01220-201ENST00000558575 MEIS2O14770 477 aa17.85■□□□□ 0.45
LINC01220-201ENST00000558575 CPLX1O14810 134 aa17.85■□□□□ 0.45
LINC01220-201ENST00000558575 ADAMTS3O15072 1205 aa17.85■□□□□ 0.45
LINC01220-201ENST00000558575 PGK1P00558 417 aa17.85■□□□□ 0.45
LINC01220-201ENST00000558575 SCG2P13521 617 aa17.85■□□□□ 0.45
LINC01220-201ENST00000558575 HOXA13P31271 388 aaPredicted RBP17.85■□□□□ 0.45
LINC01220-201ENST00000558575 MORC4Q8TE76 937 aa17.85■□□□□ 0.45
LINC01220-201ENST00000558575 BARHL2Q9NY43 387 aa17.85■□□□□ 0.45
LINC01220-201ENST00000558575 GCOM1H8Y6P7 765 aaPredicted RBP17.84■□□□□ 0.45
LINC01220-201ENST00000558575 TIMP1P01033 207 aa17.84■□□□□ 0.45
LINC01220-201ENST00000558575 POLR2MP0CAP2 368 aa17.84■□□□□ 0.45
LINC01220-201ENST00000558575 FDPSP14324 419 aaKnown RBP17.84■□□□□ 0.45
LINC01220-201ENST00000558575 SSRP1Q08945 709 aaKnown RBP17.84■□□□□ 0.45
LINC01220-201ENST00000558575 USP17L6PQ6QN14 398 aa17.84■□□□□ 0.45
LINC01220-201ENST00000558575 ANKRD33Q7Z3H0 272 aa17.84■□□□□ 0.45
LINC01220-201ENST00000558575 ALYREFQ86V81 257 aaKnown RBP17.84■□□□□ 0.45
LINC01220-201ENST00000558575 MSL3Q8N5Y2 521 aaKnown RBP17.84■□□□□ 0.45
LINC01220-201ENST00000558575 AIFM3Q96NN9 605 aa17.84■□□□□ 0.45
LINC01220-201ENST00000558575 KATNBL1Q9H079 304 aa17.84■□□□□ 0.45
LINC01220-201ENST00000558575 C11orf16Q9NQ32 467 aa17.84■□□□□ 0.45
LINC01220-201ENST00000558575 TBX21Q9UL17 535 aa17.84■□□□□ 0.45
LINC01220-201ENST00000558575 MYH6P13533 1939 aa17.83■□□□□ 0.44
LINC01220-201ENST00000558575 ZNF865P0CJ78 1059 aaPredicted RBP17.83■□□□□ 0.44
LINC01220-201ENST00000558575 ALDH5A1P51649 535 aaPredicted RBP17.83■□□□□ 0.44
LINC01220-201ENST00000558575 ARMCX2Q7L311 632 aa17.83■□□□□ 0.44
LINC01220-201ENST00000558575 SAMD3Q8N6K7 520 aa17.83■□□□□ 0.44
LINC01220-201ENST00000558575 NSUN7Q8NE18 718 aaKnown RBP17.83■□□□□ 0.44
LINC01220-201ENST00000558575 KHSRPQ92945 711 aaKnown RBP eCLIP17.83■□□□□ 0.44
LINC01220-201ENST00000558575 LENG1Q96BZ8 264 aaPredicted RBP17.83■□□□□ 0.44
LINC01220-201ENST00000558575 ZSCAN31Q96LW9 406 aaPredicted RBP17.83■□□□□ 0.44
LINC01220-201ENST00000558575 NKX2-4Q9H2Z4 354 aa17.83■□□□□ 0.44
LINC01220-201ENST00000558575 PSTPIP2Q9H939 334 aa17.83■□□□□ 0.44
LINC01220-201ENST00000558575 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.83■□□□□ 0.44
LINC01220-201ENST00000558575 MAP3K20Q9NYL2 800 aaKnown RBP17.83■□□□□ 0.44
LINC01220-201ENST00000558575 LCTP09848 1927 aa17.82■□□□□ 0.44
LINC01220-201ENST00000558575 PIK3CDO00329 1044 aa17.82■□□□□ 0.44
LINC01220-201ENST00000558575 ST18O60284 1047 aa17.82■□□□□ 0.44
LINC01220-201ENST00000558575 JAK2O60674 1132 aa17.82■□□□□ 0.44
LINC01220-201ENST00000558575 CSF2RAP15509 400 aa17.82■□□□□ 0.44
LINC01220-201ENST00000558575 EDNRBP24530 442 aa17.82■□□□□ 0.44
LINC01220-201ENST00000558575 NAPAP54920 295 aa17.82■□□□□ 0.44
LINC01220-201ENST00000558575 TMEM31Q5JXX7 168 aa17.82■□□□□ 0.44
LINC01220-201ENST00000558575 MFSD5Q6N075 450 aa17.82■□□□□ 0.44
LINC01220-201ENST00000558575 CPLX2Q6PUV4 134 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms