RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 MYO5CQ9NQX4 1742 aa5.4□□□□□ -1.54
LRRC28-205ENST00000558248 MED14O60244 1454 aa5.4□□□□□ -1.54
LRRC28-205ENST00000558248 KIDINS220Q9ULH0 1771 aa5.4□□□□□ -1.54
LRRC28-205ENST00000558248 KRTAP4-8A0A0G2JLE6 195 aa5.4□□□□□ -1.54
LRRC28-205ENST00000558248 TCAF2A6NFQ2 919 aa5.4□□□□□ -1.54
LRRC28-205ENST00000558248 CBFA2T2O43439 604 aa5.4□□□□□ -1.54
LRRC28-205ENST00000558248 CREB3O43889 395 aa5.4□□□□□ -1.54
LRRC28-205ENST00000558248 DNAJC6O75061 913 aa5.4□□□□□ -1.54
LRRC28-205ENST00000558248 SEMA7AO75326 666 aa5.4□□□□□ -1.54
LRRC28-205ENST00000558248 TBC1D8O95759 1140 aa5.4□□□□□ -1.54
LRRC28-205ENST00000558248 EPHX1P07099 455 aa5.4□□□□□ -1.54
LRRC28-205ENST00000558248 PNLIPP16233 465 aa5.4□□□□□ -1.54
LRRC28-205ENST00000558248 TMEM62Q0P6H9 643 aa5.4□□□□□ -1.54
LRRC28-205ENST00000558248 LAPTM5Q13571 262 aa5.4□□□□□ -1.54
LRRC28-205ENST00000558248 PPP2R5DQ14738 602 aa5.4□□□□□ -1.54
LRRC28-205ENST00000558248 NCAPHQ15003 741 aa5.4□□□□□ -1.54
LRRC28-205ENST00000558248 PLEKHG6Q3KR16 790 aa5.4□□□□□ -1.54
LRRC28-205ENST00000558248 HSF5Q4G112 596 aaPredicted RBP5.4□□□□□ -1.54
LRRC28-205ENST00000558248 SPTY2D1Q68D10 685 aaPredicted RBP5.4□□□□□ -1.54
LRRC28-205ENST00000558248 KIAA1211LQ6NV74 962 aa5.4□□□□□ -1.54
LRRC28-205ENST00000558248 APBB1IPQ7Z5R6 666 aaPredicted RBP5.4□□□□□ -1.54
LRRC28-205ENST00000558248 FILIP1Q7Z7B0 1213 aa5.4□□□□□ -1.54
LRRC28-205ENST00000558248 CCDC146Q8IYE0 955 aa5.4□□□□□ -1.54
LRRC28-205ENST00000558248 ADCY4Q8NFM4 1077 aa5.4□□□□□ -1.54
LRRC28-205ENST00000558248 KCNN1Q92952 543 aa5.4□□□□□ -1.54
LRRC28-205ENST00000558248 TOX2Q96NM4 488 aa5.4□□□□□ -1.54
LRRC28-205ENST00000558248 SLC12A9Q9BXP2 914 aa5.4□□□□□ -1.54
LRRC28-205ENST00000558248 KLHL25Q9H0H3 589 aa5.4□□□□□ -1.54
LRRC28-205ENST00000558248 PCDH12Q9NPG4 1184 aa5.4□□□□□ -1.54
LRRC28-205ENST00000558248 PRKAB1Q9Y478 270 aa5.4□□□□□ -1.54
LRRC28-205ENST00000558248 MRPL42Q9Y6G3 142 aaKnown RBP5.4□□□□□ -1.54
LRRC28-205ENST00000558248 SETBP1Q9Y6X0 1596 aa5.39□□□□□ -1.55
LRRC28-205ENST00000558248 A0A1W2PQJ5 194 aa5.39□□□□□ -1.55
LRRC28-205ENST00000558248 ANKRD34BA5PLL1 514 aa5.39□□□□□ -1.55
LRRC28-205ENST00000558248 ABLIM1O14639 778 aa5.39□□□□□ -1.55
LRRC28-205ENST00000558248 MAFGO15525 162 aa5.39□□□□□ -1.55
LRRC28-205ENST00000558248 PEX10O60683 326 aa5.39□□□□□ -1.55
LRRC28-205ENST00000558248 GLDCP23378 1020 aa5.39□□□□□ -1.55
LRRC28-205ENST00000558248 CYP4F8P98187 520 aa5.39□□□□□ -1.55
LRRC28-205ENST00000558248 RTP2Q5QGT7 225 aa5.39□□□□□ -1.55
LRRC28-205ENST00000558248 MEX3CQ5U5Q3 659 aaKnown RBP5.39□□□□□ -1.55
LRRC28-205ENST00000558248 EEF1DP3Q658K8 133 aa5.39□□□□□ -1.55
LRRC28-205ENST00000558248 POMZP3Q6PJE2 187 aa5.39□□□□□ -1.55
LRRC28-205ENST00000558248 NUP43Q8NFH3 380 aa5.39□□□□□ -1.55
LRRC28-205ENST00000558248 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.39□□□□□ -1.55
LRRC28-205ENST00000558248 SPC25Q9HBM1 224 aa5.39□□□□□ -1.55
LRRC28-205ENST00000558248 TNRQ92752 1358 aa5.39□□□□□ -1.55
LRRC28-205ENST00000558248 ABCC1P33527 1531 aa5.38□□□□□ -1.55
LRRC28-205ENST00000558248 NOTOA8MTQ0 251 aa5.38□□□□□ -1.55
LRRC28-205ENST00000558248 HRKO00198 91 aa5.38□□□□□ -1.55
LRRC28-205ENST00000558248 MPOP05164 745 aa5.38□□□□□ -1.55
LRRC28-205ENST00000558248 PRKCAP17252 672 aa5.38□□□□□ -1.55
LRRC28-205ENST00000558248 GALK1P51570 392 aa5.38□□□□□ -1.55
LRRC28-205ENST00000558248 HNRNPMP52272 730 aaKnown RBP eCLIP5.38□□□□□ -1.55
LRRC28-205ENST00000558248 ZNF143P52747 638 aaPredicted RBP5.38□□□□□ -1.55
LRRC28-205ENST00000558248 AMPD2Q01433 879 aa5.38□□□□□ -1.55
LRRC28-205ENST00000558248 NBPF6Q5VWK0 638 aa5.38□□□□□ -1.55
LRRC28-205ENST00000558248 SLCO6A1Q86UG4 719 aa5.38□□□□□ -1.55
LRRC28-205ENST00000558248 FAM169BQ8N8A8 192 aa5.38□□□□□ -1.55
LRRC28-205ENST00000558248 ZSCAN18Q8TBC5 510 aaPredicted RBP5.38□□□□□ -1.55
LRRC28-205ENST00000558248 SHISA4Q96DD7 197 aa5.38□□□□□ -1.55
LRRC28-205ENST00000558248 RCC1LQ96I51 464 aaKnown RBP5.38□□□□□ -1.55
LRRC28-205ENST00000558248 NBPF4Q96M43 638 aa5.38□□□□□ -1.55
LRRC28-205ENST00000558248 FGD4Q96M96 766 aa5.38□□□□□ -1.55
LRRC28-205ENST00000558248 APBA2Q99767 749 aa5.38□□□□□ -1.55
LRRC28-205ENST00000558248 ZNF552Q9H707 407 aaPredicted RBP5.38□□□□□ -1.55
LRRC28-205ENST00000558248 TYW1Q9NV66 732 aaKnown RBP5.38□□□□□ -1.55
LRRC28-205ENST00000558248 ACTR10Q9NZ32 417 aa5.38□□□□□ -1.55
LRRC28-205ENST00000558248 CGGBP1Q9UFW8 167 aaPredicted RBP5.38□□□□□ -1.55
LRRC28-205ENST00000558248 R3HCC1Q9Y3T6 440 aaKnown RBP5.38□□□□□ -1.55
LRRC28-205ENST00000558248 JCADQ9P266 1359 aa5.38□□□□□ -1.55
LRRC28-205ENST00000558248 KIF14Q15058 1648 aa5.37□□□□□ -1.55
LRRC28-205ENST00000558248 TRBV23OR9-2A0A075B6M9 112 aa5.37□□□□□ -1.55
LRRC28-205ENST00000558248 PPP1R12AO14974 1030 aaPredicted RBP5.37□□□□□ -1.55
LRRC28-205ENST00000558248 FGF10O15520 208 aaPredicted RBP5.37□□□□□ -1.55
LRRC28-205ENST00000558248 CENPBP07199 599 aaPredicted RBP5.37□□□□□ -1.55
LRRC28-205ENST00000558248 FGRP09769 529 aa5.37□□□□□ -1.55
LRRC28-205ENST00000558248 MED14OSP0DP75 135 aa5.37□□□□□ -1.55
LRRC28-205ENST00000558248 IFNGR1P15260 489 aa5.37□□□□□ -1.55
LRRC28-205ENST00000558248 PTMSP20962 102 aa5.37□□□□□ -1.55
LRRC28-205ENST00000558248 SEPHS1P49903 392 aa5.37□□□□□ -1.55
LRRC28-205ENST00000558248 JAG1P78504 1218 aa5.37□□□□□ -1.55
LRRC28-205ENST00000558248 GRB10Q13322 594 aa5.37□□□□□ -1.55
LRRC28-205ENST00000558248 FZD5Q13467 585 aa5.37□□□□□ -1.55
LRRC28-205ENST00000558248 RCSD1Q6JBY9 416 aa5.37□□□□□ -1.55
LRRC28-205ENST00000558248 ATG14Q6ZNE5 492 aa5.37□□□□□ -1.55
LRRC28-205ENST00000558248 CKAP2LQ8IYA6 745 aa5.37□□□□□ -1.55
LRRC28-205ENST00000558248 KLHL6Q8WZ60 621 aa5.37□□□□□ -1.55
LRRC28-205ENST00000558248 PPP1R14AQ96A00 147 aa5.37□□□□□ -1.55
LRRC28-205ENST00000558248 PTCHD1Q96NR3 888 aa5.37□□□□□ -1.55
LRRC28-205ENST00000558248 FCRL3Q96P31 734 aaPredicted RBP5.37□□□□□ -1.55
LRRC28-205ENST00000558248 PLCD4Q9BRC7 762 aa5.37□□□□□ -1.55
LRRC28-205ENST00000558248 IFT57Q9NWB7 429 aa5.37□□□□□ -1.55
LRRC28-205ENST00000558248 SIRT5Q9NXA8 310 aa5.37□□□□□ -1.55
LRRC28-205ENST00000558248 IMPACTQ9P2X3 320 aa5.37□□□□□ -1.55
LRRC28-205ENST00000558248 MRVI1Q9Y6F6 885 aa5.37□□□□□ -1.55
LRRC28-205ENST00000558248 SPAG9O60271 1321 aaKnown RBP5.37□□□□□ -1.55
LRRC28-205ENST00000558248 LRP6O75581 1613 aa5.37□□□□□ -1.55
LRRC28-205ENST00000558248 XIRP1Q702N8 1843 aaKnown RBP5.37□□□□□ -1.55
LRRC28-205ENST00000558248 TEX51A0A1B0GUA7 166 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms