RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 VEGFBP49765 207 aa19.1■□□□□ 0.65
SNX1-203ENST00000558040 CEP55Q53EZ4 464 aa19.1■□□□□ 0.65
SNX1-203ENST00000558040 DTHD1Q6ZMT9 781 aa19.1■□□□□ 0.65
SNX1-203ENST00000558040 NIPA1Q7RTP0 329 aa19.1■□□□□ 0.65
SNX1-203ENST00000558040 GPR142Q7Z601 462 aa19.1■□□□□ 0.65
SNX1-203ENST00000558040 PLEKHH3Q7Z736 793 aa19.1■□□□□ 0.65
SNX1-203ENST00000558040 FAM133AQ8N9E0 248 aa19.1■□□□□ 0.65
SNX1-203ENST00000558040 ZNF579Q8NAF0 562 aaKnown RBP19.1■□□□□ 0.65
SNX1-203ENST00000558040 TMEM60Q9H2L4 133 aa19.1■□□□□ 0.65
SNX1-203ENST00000558040 DDX49Q9Y6V7 483 aaKnown RBP19.1■□□□□ 0.65
SNX1-203ENST00000558040 DNAJC25-GNG10A0A024R161 153 aa19.09■□□□□ 0.65
SNX1-203ENST00000558040 LOC102724159A0A0B4J2E5 919 aa19.09■□□□□ 0.65
SNX1-203ENST00000558040 FAM86B1E9PN63 330 aa19.09■□□□□ 0.65
SNX1-203ENST00000558040 NR3C2P08235 984 aa19.09■□□□□ 0.65
SNX1-203ENST00000558040 FAM86B2P0C5J1 330 aa19.09■□□□□ 0.65
SNX1-203ENST00000558040 MYCLP12524 364 aaPredicted RBP19.09■□□□□ 0.65
SNX1-203ENST00000558040 CNTN2Q02246 1040 aa19.09■□□□□ 0.65
SNX1-203ENST00000558040 PWP2Q15269 919 aaKnown RBP19.09■□□□□ 0.65
SNX1-203ENST00000558040 TMEM266Q2M3C6 531 aa19.09■□□□□ 0.65
SNX1-203ENST00000558040 AXDND1Q5T1B0 1012 aaPredicted RBP19.09■□□□□ 0.65
SNX1-203ENST00000558040 SLFN12Q8IYM2 578 aa19.09■□□□□ 0.65
SNX1-203ENST00000558040 IL31RAQ8NI17 732 aa19.09■□□□□ 0.65
SNX1-203ENST00000558040 MTMR9Q96QG7 549 aa19.09■□□□□ 0.65
SNX1-203ENST00000558040 PURBQ96QR8 312 aaKnown RBP19.09■□□□□ 0.65
SNX1-203ENST00000558040 MXRA8Q9BRK3 442 aa19.09■□□□□ 0.65
SNX1-203ENST00000558040 MRVI1Q9Y6F6 885 aa19.09■□□□□ 0.65
SNX1-203ENST00000558040 VWA3AA6NCI4 1184 aa19.08■□□□□ 0.64
SNX1-203ENST00000558040 CMA1P23946 247 aa19.08■□□□□ 0.64
SNX1-203ENST00000558040 LONP1P36776 959 aaKnown RBP19.08■□□□□ 0.64
SNX1-203ENST00000558040 ALDH5A1P51649 535 aaPredicted RBP19.08■□□□□ 0.64
SNX1-203ENST00000558040 TPRNQ4KMQ1 711 aa19.08■□□□□ 0.64
SNX1-203ENST00000558040 CCDC73Q6ZRK6 1079 aa19.08■□□□□ 0.64
SNX1-203ENST00000558040 VSIG10LQ86VR7 867 aa19.08■□□□□ 0.64
SNX1-203ENST00000558040 PLA2G4DQ86XP0 818 aa19.08■□□□□ 0.64
SNX1-203ENST00000558040 MRPS27Q92552 414 aaKnown RBP19.08■□□□□ 0.64
SNX1-203ENST00000558040 FAM20AQ96MK3 541 aa19.08■□□□□ 0.64
SNX1-203ENST00000558040 RAB34Q9BZG1 259 aa19.08■□□□□ 0.64
SNX1-203ENST00000558040 R3HDMLQ9H3Y0 253 aa19.08■□□□□ 0.64
SNX1-203ENST00000558040 KCNMB3Q9NPA1 279 aa19.08■□□□□ 0.64
SNX1-203ENST00000558040 UBIAD1Q9Y5Z9 338 aa19.08■□□□□ 0.64
SNX1-203ENST00000558040 PLXNB2O15031 1838 aa19.08■□□□□ 0.64
SNX1-203ENST00000558040 THSD7BQ9C0I4 1608 aa19.07■□□□□ 0.64
SNX1-203ENST00000558040 IGLV3-22A0A075B6J6 115 aa19.07■□□□□ 0.64
SNX1-203ENST00000558040 SLC15A5A6NIM6 579 aa19.07■□□□□ 0.64
SNX1-203ENST00000558040 MEIS1O00470 390 aa19.07■□□□□ 0.64
SNX1-203ENST00000558040 PGK2P07205 417 aa19.07■□□□□ 0.64
SNX1-203ENST00000558040 ADORA2AP29274 412 aa19.07■□□□□ 0.64
SNX1-203ENST00000558040 GRB14Q14449 540 aa19.07■□□□□ 0.64
SNX1-203ENST00000558040 STXBP2Q15833 593 aa19.07■□□□□ 0.64
SNX1-203ENST00000558040 NLRX1Q86UT6 975 aa19.07■□□□□ 0.64
SNX1-203ENST00000558040 FSIP1Q8NA03 581 aa19.07■□□□□ 0.64
SNX1-203ENST00000558040 LENG9Q96B70 501 aa19.07■□□□□ 0.64
SNX1-203ENST00000558040 CLIC6Q96NY7 704 aa19.07■□□□□ 0.64
SNX1-203ENST00000558040 CFHR5Q9BXR6 569 aa19.07■□□□□ 0.64
SNX1-203ENST00000558040 CSRNP2Q9H175 543 aa19.07■□□□□ 0.64
SNX1-203ENST00000558040 SLC5A4Q9NY91 659 aa19.07■□□□□ 0.64
SNX1-203ENST00000558040 FAM13BQ9NYF5 915 aa19.07■□□□□ 0.64
SNX1-203ENST00000558040 LCTP09848 1927 aa19.06■□□□□ 0.64
SNX1-203ENST00000558040 SOWAHBA6NEL2 793 aa19.06■□□□□ 0.64
SNX1-203ENST00000558040 TRAK2O60296 914 aa19.06■□□□□ 0.64
SNX1-203ENST00000558040 TXKP42681 527 aa19.06■□□□□ 0.64
SNX1-203ENST00000558040 MRPS9P82933 396 aaKnown RBP19.06■□□□□ 0.64
SNX1-203ENST00000558040 HTRA3P83110 453 aa19.06■□□□□ 0.64
SNX1-203ENST00000558040 PDE4DQ08499 809 aa19.06■□□□□ 0.64
SNX1-203ENST00000558040 KLHL40Q2TBA0 621 aa19.06■□□□□ 0.64
SNX1-203ENST00000558040 ETNPPLQ8TBG4 499 aa19.06■□□□□ 0.64
SNX1-203ENST00000558040 AK8Q96MA6 479 aa19.06■□□□□ 0.64
SNX1-203ENST00000558040 JADE2Q9NQC1 790 aa19.06■□□□□ 0.64
SNX1-203ENST00000558040 ZNF236Q9UL36 1845 aa19.06■□□□□ 0.64
SNX1-203ENST00000558040 ASB14A6NK59 587 aa19.05■□□□□ 0.64
SNX1-203ENST00000558040 MSH4O15457 936 aa19.05■□□□□ 0.64
SNX1-203ENST00000558040 MAFGO15525 162 aa19.05■□□□□ 0.64
SNX1-203ENST00000558040 ITGB5P18084 799 aa19.05■□□□□ 0.64
SNX1-203ENST00000558040 EDNRBP24530 442 aa19.05■□□□□ 0.64
SNX1-203ENST00000558040 TXLNAP40222 546 aa19.05■□□□□ 0.64
SNX1-203ENST00000558040 FXR2P51116 673 aaKnown RBP eCLIP19.05■□□□□ 0.64
SNX1-203ENST00000558040 MTMR1Q13613 665 aa19.05■□□□□ 0.64
SNX1-203ENST00000558040 GNPTABQ3T906 1256 aa19.05■□□□□ 0.64
SNX1-203ENST00000558040 RESP18Q5W5W9 173 aa19.05■□□□□ 0.64
SNX1-203ENST00000558040 SHC4Q6S5L8 630 aa19.05■□□□□ 0.64
SNX1-203ENST00000558040 DPP9Q86TI2 863 aa19.05■□□□□ 0.64
SNX1-203ENST00000558040 CYP2W1Q8TAV3 490 aa19.05■□□□□ 0.64
SNX1-203ENST00000558040 GPT2Q8TD30 523 aa19.05■□□□□ 0.64
SNX1-203ENST00000558040 HAS1Q92839 578 aa19.05■□□□□ 0.64
SNX1-203ENST00000558040 GPRASP2Q96D09 838 aa19.05■□□□□ 0.64
SNX1-203ENST00000558040 CDHR1Q96JP9 859 aa19.05■□□□□ 0.64
SNX1-203ENST00000558040 TTC12Q9H892 705 aaPredicted RBP19.05■□□□□ 0.64
SNX1-203ENST00000558040 PCDHA12Q9UN75 941 aa19.05■□□□□ 0.64
SNX1-203ENST00000558040 DIS3Q9Y2L1 958 aaKnown RBP19.05■□□□□ 0.64
SNX1-203ENST00000558040 ASTN1O14525 1302 aa19.04■□□□□ 0.64
SNX1-203ENST00000558040 EIF3JO75822 258 aaKnown RBP19.04■□□□□ 0.64
SNX1-203ENST00000558040 HSPA6P17066 643 aa19.04■□□□□ 0.64
SNX1-203ENST00000558040 TECP42680 631 aa19.04■□□□□ 0.64
SNX1-203ENST00000558040 GRIN1Q05586 938 aa19.04■□□□□ 0.64
SNX1-203ENST00000558040 PDIA5Q14554 519 aa19.04■□□□□ 0.64
SNX1-203ENST00000558040 IL17AQ16552 155 aa19.04■□□□□ 0.64
SNX1-203ENST00000558040 ZNF792Q3KQV3 632 aa19.04■□□□□ 0.64
SNX1-203ENST00000558040 ZNF467Q7Z7K2 595 aaPredicted RBP19.04■□□□□ 0.64
SNX1-203ENST00000558040 SOCS4Q8WXH5 440 aa19.04■□□□□ 0.64
SNX1-203ENST00000558040 INPP4AQ96PE3 977 aaPredicted RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms