RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 MAST4O15021 2626 aa15.87■□□□□ 0.13
TMEM260-215ENST00000557626 IDH1O75874 414 aaKnown RBP15.87■□□□□ 0.13
TMEM260-215ENST00000557626 SP100P23497 879 aaPredicted RBP15.87■□□□□ 0.13
TMEM260-215ENST00000557626 FLCNQ8NFG4 579 aa15.87■□□□□ 0.13
TMEM260-215ENST00000557626 DBF4BQ8NFT6 615 aa15.87■□□□□ 0.13
TMEM260-215ENST00000557626 KIFC2Q96AC6 838 aa15.87■□□□□ 0.13
TMEM260-215ENST00000557626 SLC38A10Q9HBR0 1119 aa15.87■□□□□ 0.13
TMEM260-215ENST00000557626 PTPRCP08575 1304 aa15.87■□□□□ 0.13
TMEM260-215ENST00000557626 ASH1LQ9NR48 2969 aaKnown RBP15.86■□□□□ 0.13
TMEM260-215ENST00000557626 GLP2RO95838 553 aa15.86■□□□□ 0.13
TMEM260-215ENST00000557626 COL9A3Q14050 684 aaPredicted RBP15.86■□□□□ 0.13
TMEM260-215ENST00000557626 MBTPS1Q14703 1052 aa15.86■□□□□ 0.13
TMEM260-215ENST00000557626 ADGRD2Q7Z7M1 963 aa15.86■□□□□ 0.13
TMEM260-215ENST00000557626 DTWD2Q8NBA8 298 aa15.86■□□□□ 0.13
TMEM260-215ENST00000557626 DYNLL2Q96FJ2 89 aa15.86■□□□□ 0.13
TMEM260-215ENST00000557626 CCDC17Q96LX7 622 aa15.86■□□□□ 0.13
TMEM260-215ENST00000557626 IFIH1Q9BYX4 1025 aaKnown RBP15.86■□□□□ 0.13
TMEM260-215ENST00000557626 KANSL2Q9H9L4 492 aa15.86■□□□□ 0.13
TMEM260-215ENST00000557626 EMSYQ7Z589 1322 aa15.86■□□□□ 0.13
TMEM260-215ENST00000557626 ZAP70P43403 619 aa15.85■□□□□ 0.13
TMEM260-215ENST00000557626 NRIP1P48552 1158 aa15.85■□□□□ 0.13
TMEM260-215ENST00000557626 OAZ1P54368 228 aa15.85■□□□□ 0.13
TMEM260-215ENST00000557626 ZNF618Q5T7W0 954 aa15.85■□□□□ 0.13
TMEM260-215ENST00000557626 CWF19L1Q69YN2 538 aaKnown RBP15.85■□□□□ 0.13
TMEM260-215ENST00000557626 CDV3Q9UKY7 258 aaKnown RBP15.85■□□□□ 0.13
TMEM260-215ENST00000557626 DCDC2BA2VCK2 349 aa15.84■□□□□ 0.13
TMEM260-215ENST00000557626 CYP2D6P10635 497 aa15.84■□□□□ 0.13
TMEM260-215ENST00000557626 AOC1P19801 751 aa15.84■□□□□ 0.13
TMEM260-215ENST00000557626 CCDC158Q5M9N0 1113 aa15.84■□□□□ 0.13
TMEM260-215ENST00000557626 ZC3H14Q6PJT7 736 aaKnown RBP15.84■□□□□ 0.13
TMEM260-215ENST00000557626 TRAF7Q6Q0C0 670 aa15.84■□□□□ 0.13
TMEM260-215ENST00000557626 SESTD1Q86VW0 696 aa15.84■□□□□ 0.13
TMEM260-215ENST00000557626 IL17RAQ96F46 866 aa15.84■□□□□ 0.13
TMEM260-215ENST00000557626 SMOC2Q9H3U7 446 aa15.84■□□□□ 0.13
TMEM260-215ENST00000557626 RNF146Q9NTX7 359 aa15.84■□□□□ 0.13
TMEM260-215ENST00000557626 CEP295Q9C0D2 2601 aa15.83■□□□□ 0.13
TMEM260-215ENST00000557626 A6NJR5 290 aa15.83■□□□□ 0.12
TMEM260-215ENST00000557626 PI15O43692 258 aa15.83■□□□□ 0.12
TMEM260-215ENST00000557626 LINC00271P0C7V0 271 aa15.83■□□□□ 0.12
TMEM260-215ENST00000557626 CAMK1Q14012 370 aa15.83■□□□□ 0.12
TMEM260-215ENST00000557626 RBM23Q86U06 439 aaKnown RBP15.83■□□□□ 0.12
TMEM260-215ENST00000557626 TSHZ2Q9NRE2 1034 aa15.83■□□□□ 0.12
TMEM260-215ENST00000557626 NR2E1Q9Y466 385 aa15.83■□□□□ 0.12
TMEM260-215ENST00000557626 LCTP09848 1927 aa15.83■□□□□ 0.12
TMEM260-215ENST00000557626 FANCMQ8IYD8 2048 aa15.82■□□□□ 0.12
TMEM260-215ENST00000557626 SOBPA7XYQ1 873 aa15.82■□□□□ 0.12
TMEM260-215ENST00000557626 PPP2R5BQ15173 497 aa15.82■□□□□ 0.12
TMEM260-215ENST00000557626 MORC4Q8TE76 937 aa15.82■□□□□ 0.12
TMEM260-215ENST00000557626 RTP3Q9BQQ7 232 aa15.82■□□□□ 0.12
TMEM260-215ENST00000557626 RIOK1Q9BRS2 568 aaKnown RBP15.82■□□□□ 0.12
TMEM260-215ENST00000557626 RTKNQ9BST9 563 aa15.82■□□□□ 0.12
TMEM260-215ENST00000557626 CRNKL1Q9BZJ0 848 aaKnown RBP15.82■□□□□ 0.12
TMEM260-215ENST00000557626 HDAC5Q9UQL6 1122 aa15.82■□□□□ 0.12
TMEM260-215ENST00000557626 NKRFO15226 690 aaKnown RBP eCLIP15.81■□□□□ 0.12
TMEM260-215ENST00000557626 PTK7Q13308 1070 aa15.81■□□□□ 0.12
TMEM260-215ENST00000557626 PLEKHG4Q58EX7 1191 aa15.81■□□□□ 0.12
TMEM260-215ENST00000557626 MRPL50Q8N5N7 158 aaKnown RBP15.81■□□□□ 0.12
TMEM260-215ENST00000557626 PLVAPQ9BX97 442 aa15.81■□□□□ 0.12
TMEM260-215ENST00000557626 GTF2IRD1Q9UHL9 959 aa15.81■□□□□ 0.12
TMEM260-215ENST00000557626 PLAGL2Q9UPG8 496 aa15.81■□□□□ 0.12
TMEM260-215ENST00000557626 ADGRA3Q8IWK6 1321 aa15.8■□□□□ 0.12
TMEM260-215ENST00000557626 MAGEB6P1A0A0J9YX57 407 aa15.8■□□□□ 0.12
TMEM260-215ENST00000557626 PRR5-ARHGAP8B1AHC4 643 aa15.8■□□□□ 0.12
TMEM260-215ENST00000557626 SRGAP3O43295 1099 aa15.8■□□□□ 0.12
TMEM260-215ENST00000557626 NDUFB10O96000 172 aa15.8■□□□□ 0.12
TMEM260-215ENST00000557626 ARHGAP8P85298 464 aa15.8■□□□□ 0.12
TMEM260-215ENST00000557626 TRIM71Q2Q1W2 868 aaKnown RBP15.8■□□□□ 0.12
TMEM260-215ENST00000557626 CLP1Q92989 425 aaKnown RBP15.8■□□□□ 0.12
TMEM260-215ENST00000557626 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.79■□□□□ 0.12
TMEM260-215ENST00000557626 RBM47A0AV96 593 aaKnown RBP15.79■□□□□ 0.12
TMEM260-215ENST00000557626 F5H6K3 240 aa15.79■□□□□ 0.12
TMEM260-215ENST00000557626 ARP10275 920 aa15.79■□□□□ 0.12
TMEM260-215ENST00000557626 CDK8P49336 464 aa15.79■□□□□ 0.12
TMEM260-215ENST00000557626 KLRC3Q07444 240 aa15.79■□□□□ 0.12
TMEM260-215ENST00000557626 SDR42E1Q8WUS8 393 aa15.79■□□□□ 0.12
TMEM260-215ENST00000557626 SEPT8Q92599 483 aa15.79■□□□□ 0.12
TMEM260-215ENST00000557626 COPS5Q92905 334 aa15.79■□□□□ 0.12
TMEM260-215ENST00000557626 WNT8BQ93098 351 aa15.79■□□□□ 0.12
TMEM260-215ENST00000557626 TRERF1Q96PN7 1200 aa15.79■□□□□ 0.12
TMEM260-215ENST00000557626 NEK1Q96PY6 1258 aa15.79■□□□□ 0.12
TMEM260-215ENST00000557626 DCP1AQ9NPI6 582 aaPredicted RBP15.79■□□□□ 0.12
TMEM260-215ENST00000557626 CYP39A1Q9NYL5 469 aa15.79■□□□□ 0.12
TMEM260-215ENST00000557626 FEM1BQ9UK73 627 aa15.79■□□□□ 0.12
TMEM260-215ENST00000557626 RSPH10B2B2RC85 870 aa15.78■□□□□ 0.12
TMEM260-215ENST00000557626 RSPH10BP0C881 870 aa15.78■□□□□ 0.12
TMEM260-215ENST00000557626 DNAJB1P25685 340 aa15.78■□□□□ 0.12
TMEM260-215ENST00000557626 RARSP54136 660 aaKnown RBP15.78■□□□□ 0.12
TMEM260-215ENST00000557626 LMNB2Q03252 620 aa15.78■□□□□ 0.12
TMEM260-215ENST00000557626 PDE4BQ07343 736 aa15.78■□□□□ 0.12
TMEM260-215ENST00000557626 TKFCQ3LXA3 575 aa15.78■□□□□ 0.12
TMEM260-215ENST00000557626 TMED8Q6PL24 325 aaPredicted RBP15.78■□□□□ 0.12
TMEM260-215ENST00000557626 LRRC47Q8N1G4 583 aaKnown RBP15.78■□□□□ 0.12
TMEM260-215ENST00000557626 GPR161Q8N6U8 529 aaKnown RBP15.78■□□□□ 0.12
TMEM260-215ENST00000557626 C7orf31Q8N865 590 aa15.78■□□□□ 0.12
TMEM260-215ENST00000557626 SSH1Q8WYL5 1049 aa15.78■□□□□ 0.12
TMEM260-215ENST00000557626 RIN2Q8WYP3 895 aaPredicted RBP15.78■□□□□ 0.12
TMEM260-215ENST00000557626 PURBQ96QR8 312 aaKnown RBP15.78■□□□□ 0.12
TMEM260-215ENST00000557626 DBNDD2Q9BQY9 259 aa15.78■□□□□ 0.12
TMEM260-215ENST00000557626 TLE6Q9H808 572 aa15.78■□□□□ 0.12
TMEM260-215ENST00000557626 NCDNQ9UBB6 729 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms