RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 DHCR24Q15392 516 aa6.38□□□□□ -1.39
MTHFD1-216ENST00000557539 RNF219Q5W0B1 726 aaPredicted RBP6.38□□□□□ -1.39
MTHFD1-216ENST00000557539 DZIP1LQ8IYY4 767 aaKnown RBP6.38□□□□□ -1.39
MTHFD1-216ENST00000557539 MRGPRX3Q96LB0 322 aa6.38□□□□□ -1.39
MTHFD1-216ENST00000557539 ZIM2Q9NZV7 527 aa6.38□□□□□ -1.39
MTHFD1-216ENST00000557539 WHRNQ9P202 907 aa6.38□□□□□ -1.39
MTHFD1-216ENST00000557539 AP4E1Q9UPM8 1137 aa6.38□□□□□ -1.39
MTHFD1-216ENST00000557539 SPATA31A5Q5VU36 1347 aa6.38□□□□□ -1.39
MTHFD1-216ENST00000557539 SPATA31A7Q8IWB4 1347 aa6.38□□□□□ -1.39
MTHFD1-216ENST00000557539 SYNGAP1Q96PV0 1343 aa6.38□□□□□ -1.39
MTHFD1-216ENST00000557539 PLCH1Q4KWH8 1693 aa6.38□□□□□ -1.39
MTHFD1-216ENST00000557539 NWD2Q9ULI1 1742 aa6.38□□□□□ -1.39
MTHFD1-216ENST00000557539 C1orf167Q5SNV9 1468 aa6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 NOS1P29475 1434 aa6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 F8W735 103 aaPredicted RBP6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 GPR39O43194 453 aa6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 AKAP10O43572 662 aa6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 DLX3O60479 287 aa6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 RNGTTO60942 597 aaKnown RBP6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 EFCAB14O75071 495 aa6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 KCNH1O95259 989 aa6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 NPTXRO95502 500 aa6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 CST3P01034 146 aaPredicted RBP6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 CAPNS1P04632 268 aa6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 NEFMP07197 916 aa6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 JMJD7P0C870 316 aa6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 POU3F2P20265 443 aaPredicted RBP6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 SEPT7Q16181 437 aaKnown RBP6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 CCSAPQ6IQ19 270 aaPredicted RBP6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 C14orf80Q86SX3 495 aa6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 MAP4K3Q8IVH8 894 aa6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 TRIM59Q8IWR1 403 aa6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 C7orf61Q8IZ16 206 aa6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 CHPFQ8IZ52 775 aa6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 MYO1HQ8N1T3 1032 aa6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 TMEM130Q8N3G9 435 aa6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 KCT2Q8NC54 265 aa6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 BRF1Q92994 677 aa6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 ATXN3LQ9H3M9 355 aa6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 AKTIPQ9H8T0 292 aa6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 SSU72Q9NP77 194 aaKnown RBP6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 AASDHPPTQ9NRN7 309 aa6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 EMC9Q9Y3B6 208 aa6.37□□□□□ -1.39
MTHFD1-216ENST00000557539 KCPQ6ZWJ8 1503 aa6.36□□□□□ -1.39
MTHFD1-216ENST00000557539 BRINP1O60477 761 aa6.36□□□□□ -1.39
MTHFD1-216ENST00000557539 CAND2O75155 1236 aa6.36□□□□□ -1.39
MTHFD1-216ENST00000557539 ITGA4P13612 1032 aa6.36□□□□□ -1.39
MTHFD1-216ENST00000557539 IGFALSP35858 605 aa6.36□□□□□ -1.39
MTHFD1-216ENST00000557539 FLT3P36888 993 aa6.36□□□□□ -1.39
MTHFD1-216ENST00000557539 KCNJ6P48051 423 aa6.36□□□□□ -1.39
MTHFD1-216ENST00000557539 TMPRSS15P98073 1019 aa6.36□□□□□ -1.39
MTHFD1-216ENST00000557539 AUHQ13825 339 aaKnown RBP6.36□□□□□ -1.39
MTHFD1-216ENST00000557539 SF1Q15637 639 aaKnown RBP6.36□□□□□ -1.39
MTHFD1-216ENST00000557539 TXNRD1Q16881 649 aa6.36□□□□□ -1.39
MTHFD1-216ENST00000557539 CFAP100Q494V2 611 aa6.36□□□□□ -1.39
MTHFD1-216ENST00000557539 ANKRD39Q53RE8 183 aa6.36□□□□□ -1.39
MTHFD1-216ENST00000557539 NBPF12Q5TAG4 269 aaPredicted RBP6.36□□□□□ -1.39
MTHFD1-216ENST00000557539 POMZP3Q6PJE2 187 aa6.36□□□□□ -1.39
MTHFD1-216ENST00000557539 PRR23CQ6ZRP0 262 aa6.36□□□□□ -1.39
MTHFD1-216ENST00000557539 SPATS2Q86XZ4 545 aaKnown RBP6.36□□□□□ -1.39
MTHFD1-216ENST00000557539 SMC5Q8IY18 1101 aa6.36□□□□□ -1.39
MTHFD1-216ENST00000557539 CRACR2BQ8N4Y2 399 aaPredicted RBP6.36□□□□□ -1.39
MTHFD1-216ENST00000557539 GSTCDQ8NEC7 633 aa6.36□□□□□ -1.39
MTHFD1-216ENST00000557539 KCTD13Q8WZ19 329 aa6.36□□□□□ -1.39
MTHFD1-216ENST00000557539 USP7Q93009 1102 aa6.36□□□□□ -1.39
MTHFD1-216ENST00000557539 SCLYQ96I15 445 aa6.36□□□□□ -1.39
MTHFD1-216ENST00000557539 RPS6KC1Q96S38 1066 aa6.36□□□□□ -1.39
MTHFD1-216ENST00000557539 YIPF4Q9BSR8 244 aa6.36□□□□□ -1.39
MTHFD1-216ENST00000557539 MRPL18Q9H0U6 180 aaKnown RBP6.36□□□□□ -1.39
MTHFD1-216ENST00000557539 GP6Q9HCN6 339 aa6.36□□□□□ -1.39
MTHFD1-216ENST00000557539 ZFP64Q9NPA5 681 aa6.36□□□□□ -1.39
MTHFD1-216ENST00000557539 BTG4Q9NY30 223 aa6.36□□□□□ -1.39
MTHFD1-216ENST00000557539 TRANK1O15050 2925 aa6.35□□□□□ -1.39
MTHFD1-216ENST00000557539 SHOXO15266 292 aa6.35□□□□□ -1.39
MTHFD1-216ENST00000557539 PLIN1O60240 522 aa6.35□□□□□ -1.39
MTHFD1-216ENST00000557539 WISP1O95388 367 aa6.35□□□□□ -1.39
MTHFD1-216ENST00000557539 KRT18P05783 430 aaKnown RBP6.35□□□□□ -1.39
MTHFD1-216ENST00000557539 PPP2R5DQ14738 602 aa6.35□□□□□ -1.39
MTHFD1-216ENST00000557539 DUOXA2Q1HG44 320 aa6.35□□□□□ -1.39
MTHFD1-216ENST00000557539 GTF2IRD2BQ6EKJ0 949 aa6.35□□□□□ -1.39
MTHFD1-216ENST00000557539 Q6ZS46 218 aa6.35□□□□□ -1.39
MTHFD1-216ENST00000557539 UBE2R2Q712K3 238 aaPredicted RBP6.35□□□□□ -1.39
MTHFD1-216ENST00000557539 DYMQ7RTS9 669 aa6.35□□□□□ -1.39
MTHFD1-216ENST00000557539 GTF2IRD2Q86UP8 949 aa6.35□□□□□ -1.39
MTHFD1-216ENST00000557539 ZBTB46Q86UZ6 589 aa6.35□□□□□ -1.39
MTHFD1-216ENST00000557539 AGGF1Q8N302 714 aaeCLIP6.35□□□□□ -1.39
MTHFD1-216ENST00000557539 PTPRN2Q92932 1015 aa6.35□□□□□ -1.39
MTHFD1-216ENST00000557539 ISL2Q96A47 359 aa6.35□□□□□ -1.39
MTHFD1-216ENST00000557539 HOOK2Q96ED9 719 aa6.35□□□□□ -1.39
MTHFD1-216ENST00000557539 RCC1LQ96I51 464 aaKnown RBP6.35□□□□□ -1.39
MTHFD1-216ENST00000557539 MAGEB10Q96LZ2 347 aaPredicted RBP6.35□□□□□ -1.39
MTHFD1-216ENST00000557539 TTC1Q99614 292 aa6.35□□□□□ -1.39
MTHFD1-216ENST00000557539 PCGF6Q9BYE7 350 aa6.35□□□□□ -1.39
MTHFD1-216ENST00000557539 TRIM8Q9BZR9 551 aa6.35□□□□□ -1.39
MTHFD1-216ENST00000557539 FOXQ1Q9C009 403 aa6.35□□□□□ -1.39
MTHFD1-216ENST00000557539 PIDD1Q9HB75 910 aa6.35□□□□□ -1.39
MTHFD1-216ENST00000557539 CGGBP1Q9UFW8 167 aaPredicted RBP6.35□□□□□ -1.39
MTHFD1-216ENST00000557539 FBXL21Q9UKT6 434 aa6.35□□□□□ -1.39
MTHFD1-216ENST00000557539 RGPD3A6NKT7 1758 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms