RNA–Protein interactions for RNA: ENST00000557519.1

RPS29-208, Transcript of ribosomal protein S29, human

TSL 3

Gene RPS29, Length 333 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS29-208	ENST00000557519	CCSAP	Q6IQ19	270 aa	Predicted RBP	11.19	□□□□□ -0.62
RPS29-208	ENST00000557519	ANKRD33	Q7Z3H0	272 aa		11.19	□□□□□ -0.62
RPS29-208	ENST00000557519	NLRX1	Q86UT6	975 aa		11.19	□□□□□ -0.62
RPS29-208	ENST00000557519	CMTR1	Q8N1G2	835 aa	Known RBP	11.19	□□□□□ -0.62
RPS29-208	ENST00000557519	CCDC148	Q8NFR7	591 aa		11.19	□□□□□ -0.62
RPS29-208	ENST00000557519	TBC1D5	Q92609	795 aa		11.19	□□□□□ -0.62
RPS29-208	ENST00000557519	MTG1	Q9BT17	334 aa	Predicted RBP	11.19	□□□□□ -0.62
RPS29-208	ENST00000557519	KATNAL1	Q9BW62	490 aa		11.19	□□□□□ -0.62
RPS29-208	ENST00000557519	AGXT2	Q9BYV1	514 aa		11.19	□□□□□ -0.62
RPS29-208	ENST00000557519	ZSWIM6	Q9HCJ5	1215 aa		11.19	□□□□□ -0.62
RPS29-208	ENST00000557519	PDRG1	Q9NUG6	133 aa		11.19	□□□□□ -0.62
RPS29-208	ENST00000557519	COL20A1	Q9P218	1284 aa		11.19	□□□□□ -0.62
RPS29-208	ENST00000557519	BRPF3	Q9ULD4	1205 aa		11.19	□□□□□ -0.62
RPS29-208	ENST00000557519	FRMPD4	Q14CM0	1322 aa		11.18	□□□□□ -0.62
RPS29-208	ENST00000557519	MYADML2	A6NDP7	307 aa		11.18	□□□□□ -0.62
RPS29-208	ENST00000557519	CDKL5	O76039	1030 aa		11.18	□□□□□ -0.62
RPS29-208	ENST00000557519	FOS	P01100	380 aa	Predicted RBP	11.18	□□□□□ -0.62
RPS29-208	ENST00000557519	MYL3	P08590	195 aa		11.18	□□□□□ -0.62
RPS29-208	ENST00000557519	SUPT20HL2	P0C7V6	817 aa		11.18	□□□□□ -0.62
RPS29-208	ENST00000557519	RAG1	P15918	1043 aa		11.18	□□□□□ -0.62
RPS29-208	ENST00000557519	MAGEA10	P43363	369 aa	Predicted RBP	11.18	□□□□□ -0.62
RPS29-208	ENST00000557519	TLE2	Q04725	743 aa		11.18	□□□□□ -0.62
RPS29-208	ENST00000557519	DGKD	Q16760	1214 aa		11.18	□□□□□ -0.62
RPS29-208	ENST00000557519	SLC35G1	Q2M3R5	365 aa		11.18	□□□□□ -0.62
RPS29-208	ENST00000557519	HABP4	Q5JVS0	413 aa	Known RBP	11.18	□□□□□ -0.62
RPS29-208	ENST00000557519	CXCL17	Q6UXB2	119 aa		11.18	□□□□□ -0.62
RPS29-208	ENST00000557519	VSIG10L	Q86VR7	867 aa		11.18	□□□□□ -0.62
RPS29-208	ENST00000557519	DHX37	Q8IY37	1157 aa	Known RBP	11.18	□□□□□ -0.62
RPS29-208	ENST00000557519	GIMAP8	Q8ND71	665 aa	Predicted RBP	11.18	□□□□□ -0.62
RPS29-208	ENST00000557519	BICD2	Q8TD16	824 aa		11.18	□□□□□ -0.62
RPS29-208	ENST00000557519	EMID1	Q96A84	441 aa	Predicted RBP	11.18	□□□□□ -0.62
RPS29-208	ENST00000557519	UBE2O	Q9C0C9	1292 aa	Known RBP	11.18	□□□□□ -0.62
RPS29-208	ENST00000557519	PDLIM7	Q9NR12	457 aa		11.18	□□□□□ -0.62
RPS29-208	ENST00000557519	TMEM39A	Q9NV64	488 aa		11.18	□□□□□ -0.62
RPS29-208	ENST00000557519	BARHL2	Q9NY43	387 aa		11.18	□□□□□ -0.62
RPS29-208	ENST00000557519	COLQ	Q9Y215	455 aa	Predicted RBP	11.18	□□□□□ -0.62
RPS29-208	ENST00000557519		A6NJR5	290 aa		11.17	□□□□□ -0.62
RPS29-208	ENST00000557519	FIBP	O43427	364 aa		11.17	□□□□□ -0.62
RPS29-208	ENST00000557519	SCG2	P13521	617 aa		11.17	□□□□□ -0.62
RPS29-208	ENST00000557519	CPA1	P15085	419 aa		11.17	□□□□□ -0.62
RPS29-208	ENST00000557519	GNA11	P29992	359 aa		11.17	□□□□□ -0.62
RPS29-208	ENST00000557519	AP3B2	Q13367	1082 aa		11.17	□□□□□ -0.62
RPS29-208	ENST00000557519	ITGA7	Q13683	1181 aa		11.17	□□□□□ -0.62
RPS29-208	ENST00000557519	NEDD9	Q14511	834 aa		11.17	□□□□□ -0.62
RPS29-208	ENST00000557519	PCNX4	Q63HM2	1172 aa		11.17	□□□□□ -0.62
RPS29-208	ENST00000557519	USP17L6P	Q6QN14	398 aa		11.17	□□□□□ -0.62
RPS29-208	ENST00000557519	PPTC7	Q8NI37	304 aa		11.17	□□□□□ -0.62
RPS29-208	ENST00000557519	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.17	□□□□□ -0.62
RPS29-208	ENST00000557519	ZNF274	Q96GC6	653 aa	Predicted RBP	11.17	□□□□□ -0.62
RPS29-208	ENST00000557519	RNF26	Q9BY78	433 aa	Predicted RBP	11.17	□□□□□ -0.62
RPS29-208	ENST00000557519	MLXIP	Q9HAP2	919 aa		11.17	□□□□□ -0.62
RPS29-208	ENST00000557519	UPF2	Q9HAU5	1272 aa	Known RBP	11.17	□□□□□ -0.62
RPS29-208	ENST00000557519	C6orf50	Q9HD87	102 aa		11.17	□□□□□ -0.62
RPS29-208	ENST00000557519	RIC8A	Q9NPQ8	531 aa		11.17	□□□□□ -0.62
RPS29-208	ENST00000557519	DDX41	Q9UJV9	622 aa	Known RBP	11.17	□□□□□ -0.62
RPS29-208	ENST00000557519	DDX49	Q9Y6V7	483 aa	Known RBP	11.17	□□□□□ -0.62
RPS29-208	ENST00000557519		V9GY48	417 aa	Predicted RBP	11.17	□□□□□ -0.62
RPS29-208	ENST00000557519	MYH7B	A7E2Y1	1941 aa		11.16	□□□□□ -0.62
RPS29-208	ENST00000557519	NOP56	O00567	594 aa	Known RBP	11.16	□□□□□ -0.62
RPS29-208	ENST00000557519	MEIS2	O14770	477 aa		11.16	□□□□□ -0.62
RPS29-208	ENST00000557519	KIAA0355	O15063	1070 aa		11.16	□□□□□ -0.62
RPS29-208	ENST00000557519	CTAGE5	O15320	804 aa		11.16	□□□□□ -0.62
RPS29-208	ENST00000557519	MAFG	O15525	162 aa		11.16	□□□□□ -0.62
RPS29-208	ENST00000557519	PRPF3	O43395	683 aa	Known RBP	11.16	□□□□□ -0.62
RPS29-208	ENST00000557519	MMP3	P08254	477 aa		11.16	□□□□□ -0.62
RPS29-208	ENST00000557519	XBP1	P17861	261 aa		11.16	□□□□□ -0.62
RPS29-208	ENST00000557519	EVC	P57679	992 aa		11.16	□□□□□ -0.62
RPS29-208	ENST00000557519	PURA	Q00577	322 aa	Known RBP	11.16	□□□□□ -0.62
RPS29-208	ENST00000557519	PTPN11	Q06124	597 aa	Predicted RBP	11.16	□□□□□ -0.62
RPS29-208	ENST00000557519	PFKFB3	Q16875	520 aa	Predicted RBP	11.16	□□□□□ -0.62
RPS29-208	ENST00000557519	LY6K	Q17RY6	165 aa		11.16	□□□□□ -0.62
RPS29-208	ENST00000557519	WWC2	Q6AWC2	1192 aa		11.16	□□□□□ -0.62
RPS29-208	ENST00000557519	CCDC62	Q6P9F0	684 aa		11.16	□□□□□ -0.62
RPS29-208	ENST00000557519	TDH	Q8IZJ6	230 aa		11.16	□□□□□ -0.62
RPS29-208	ENST00000557519	FAM177A1	Q8N128	213 aa	Predicted RBP	11.16	□□□□□ -0.62
RPS29-208	ENST00000557519	CCDC155	Q8N6L0	562 aa		11.16	□□□□□ -0.62
RPS29-208	ENST00000557519	GPRASP2	Q96D09	838 aa		11.16	□□□□□ -0.62
RPS29-208	ENST00000557519	GDF15	Q99988	308 aa		11.16	□□□□□ -0.62
RPS29-208	ENST00000557519	UPF3B	Q9BZI7	483 aa	Known RBP	11.16	□□□□□ -0.62
RPS29-208	ENST00000557519	NOD1	Q9Y239	953 aa		11.16	□□□□□ -0.62
RPS29-208	ENST00000557519	TRIOBP	Q9H2D6	2365 aa		11.16	□□□□□ -0.62
RPS29-208	ENST00000557519	LTBP2	Q14767	1821 aa		11.15	□□□□□ -0.62
RPS29-208	ENST00000557519	hCG_1642624	A0A1W2PR95	340 aa		11.15	□□□□□ -0.62
RPS29-208	ENST00000557519	ESYT2	A0FGR8	921 aa		11.15	□□□□□ -0.62
RPS29-208	ENST00000557519	SMCO2	A6NFE2	343 aa		11.15	□□□□□ -0.62
RPS29-208	ENST00000557519	ARIH2	O95376	493 aa		11.15	□□□□□ -0.62
RPS29-208	ENST00000557519	GGPS1	O95749	300 aa		11.15	□□□□□ -0.62
RPS29-208	ENST00000557519	IFNAR1	P17181	557 aa		11.15	□□□□□ -0.62
RPS29-208	ENST00000557519	PDIA3	P30101	505 aa	Known RBP	11.15	□□□□□ -0.62
RPS29-208	ENST00000557519	CDC27	P30260	824 aa		11.15	□□□□□ -0.62
RPS29-208	ENST00000557519	ADD1	P35611	737 aa	Known RBP	11.15	□□□□□ -0.62
RPS29-208	ENST00000557519	CDK7	P50613	346 aa		11.15	□□□□□ -0.62
RPS29-208	ENST00000557519	MDM2	Q00987	491 aa	Predicted RBP	11.15	□□□□□ -0.62
RPS29-208	ENST00000557519	ARHGAP1	Q07960	439 aa		11.15	□□□□□ -0.62
RPS29-208	ENST00000557519	SSRP1	Q08945	709 aa	Known RBP	11.15	□□□□□ -0.62
RPS29-208	ENST00000557519	COL9A3	Q14050	684 aa	Predicted RBP	11.15	□□□□□ -0.62
RPS29-208	ENST00000557519	FAM47C	Q5HY64	1035 aa		11.15	□□□□□ -0.62
RPS29-208	ENST00000557519	NFRKB	Q6P4R8	1299 aa		11.15	□□□□□ -0.62
RPS29-208	ENST00000557519	TMEM199	Q8N511	208 aa		11.15	□□□□□ -0.62
RPS29-208	ENST00000557519	AFG1L	Q8WV93	481 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms