RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 GLT8D2Q9H1C3 349 aa12.14□□□□□ -0.47
HNRNPC-232ENST00000557442 C6orf50Q9HD87 102 aa12.14□□□□□ -0.47
HNRNPC-232ENST00000557442 VPS54Q9P1Q0 977 aa12.14□□□□□ -0.47
HNRNPC-232ENST00000557442 ESYT2A0FGR8 921 aa12.13□□□□□ -0.47
HNRNPC-232ENST00000557442 DTNBO60941 627 aa12.13□□□□□ -0.47
HNRNPC-232ENST00000557442 ADAMTS4O75173 837 aa12.13□□□□□ -0.47
HNRNPC-232ENST00000557442 EIF3JO75822 258 aaKnown RBP12.13□□□□□ -0.47
HNRNPC-232ENST00000557442 CTDNEP1O95476 244 aa12.13□□□□□ -0.47
HNRNPC-232ENST00000557442 C6orf222P0C671 652 aaPredicted RBP12.13□□□□□ -0.47
HNRNPC-232ENST00000557442 SMPD1P17405 629 aa12.13□□□□□ -0.47
HNRNPC-232ENST00000557442 MNX1P50219 401 aaPredicted RBP12.13□□□□□ -0.47
HNRNPC-232ENST00000557442 TTLL4Q14679 1199 aa12.13□□□□□ -0.47
HNRNPC-232ENST00000557442 LRRC41Q15345 812 aa12.13□□□□□ -0.47
HNRNPC-232ENST00000557442 IQSEC1Q6DN90 963 aa12.13□□□□□ -0.47
HNRNPC-232ENST00000557442 UBE2Q1Q7Z7E8 422 aa12.13□□□□□ -0.47
HNRNPC-232ENST00000557442 TEX2Q8IWB9 1127 aa12.13□□□□□ -0.47
HNRNPC-232ENST00000557442 PGBD1Q96JS3 809 aa12.13□□□□□ -0.47
HNRNPC-232ENST00000557442 AIFM3Q96NN9 605 aa12.13□□□□□ -0.47
HNRNPC-232ENST00000557442 ZMYND12Q9H0C1 365 aa12.13□□□□□ -0.47
HNRNPC-232ENST00000557442 C11orf49Q9H6J7 331 aa12.13□□□□□ -0.47
HNRNPC-232ENST00000557442 EHMT1Q9H9B1 1298 aa12.13□□□□□ -0.47
HNRNPC-232ENST00000557442 SPC25Q9HBM1 224 aa12.13□□□□□ -0.47
HNRNPC-232ENST00000557442 TRIP12Q14669 1992 aaPredicted RBP12.13□□□□□ -0.47
HNRNPC-232ENST00000557442 RBM47A0AV96 593 aaKnown RBP12.12□□□□□ -0.47
HNRNPC-232ENST00000557442 MYADML2A6NDP7 307 aa12.12□□□□□ -0.47
HNRNPC-232ENST00000557442 TXNP10599 105 aaKnown RBP12.12□□□□□ -0.47
HNRNPC-232ENST00000557442 PTGS1P23219 599 aa12.12□□□□□ -0.47
HNRNPC-232ENST00000557442 GNA11P29992 359 aa12.12□□□□□ -0.47
HNRNPC-232ENST00000557442 ST3GAL1Q11201 340 aa12.12□□□□□ -0.47
HNRNPC-232ENST00000557442 AP3B2Q13367 1082 aa12.12□□□□□ -0.47
HNRNPC-232ENST00000557442 DUSP28Q4G0W2 176 aa12.12□□□□□ -0.47
HNRNPC-232ENST00000557442 TMEM63BQ5T3F8 832 aa12.12□□□□□ -0.47
HNRNPC-232ENST00000557442 PCNX4Q63HM2 1172 aa12.12□□□□□ -0.47
HNRNPC-232ENST00000557442 CHRDL2Q6WN34 429 aa12.12□□□□□ -0.47
HNRNPC-232ENST00000557442 VSIG10LQ86VR7 867 aa12.12□□□□□ -0.47
HNRNPC-232ENST00000557442 CCDC83Q8IWF9 413 aa12.12□□□□□ -0.47
HNRNPC-232ENST00000557442 REXO1Q8N1G1 1221 aaKnown RBP12.12□□□□□ -0.47
HNRNPC-232ENST00000557442 ZFP91Q96JP5 570 aaPredicted RBP12.12□□□□□ -0.47
HNRNPC-232ENST00000557442 ZSCAN31Q96LW9 406 aaPredicted RBP12.12□□□□□ -0.47
HNRNPC-232ENST00000557442 ANO3Q9BYT9 981 aa12.12□□□□□ -0.47
HNRNPC-232ENST00000557442 AP5M1Q9H0R1 490 aa12.12□□□□□ -0.47
HNRNPC-232ENST00000557442 UPF3AQ9H1J1 476 aaKnown RBP12.12□□□□□ -0.47
HNRNPC-232ENST00000557442 SH3GLB2Q9NR46 395 aa12.12□□□□□ -0.47
HNRNPC-232ENST00000557442 SH2B1Q9NRF2 756 aaPredicted RBP12.12□□□□□ -0.47
HNRNPC-232ENST00000557442 TMEM260Q9NX78 707 aa12.12□□□□□ -0.47
HNRNPC-232ENST00000557442 ORC3Q9UBD5 711 aaPredicted RBP12.12□□□□□ -0.47
HNRNPC-232ENST00000557442 PCDHA6Q9UN73 950 aa12.12□□□□□ -0.47
HNRNPC-232ENST00000557442 GNEQ9Y223 722 aaKnown RBP12.12□□□□□ -0.47
HNRNPC-232ENST00000557442 PCDHA8Q9Y5H6 950 aa12.12□□□□□ -0.47
HNRNPC-232ENST00000557442 MRVI1Q9Y6F6 885 aa12.12□□□□□ -0.47
HNRNPC-232ENST00000557442 LTBP2Q14767 1821 aa12.12□□□□□ -0.47
HNRNPC-232ENST00000557442 NKRFO15226 690 aaKnown RBP eCLIP12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 ARIH2O95376 493 aa12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 FOSP01100 380 aaPredicted RBP12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 CLK2P49760 499 aaKnown RBP12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 GJA9P57773 515 aa12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 NLRP5P59047 1200 aa12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 IRX5P78411 483 aaPredicted RBP12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 MRPS9P82933 396 aaKnown RBP12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 GNPTABQ3T906 1256 aa12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 JAKMIP3Q5VZ66 844 aa12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 NSUN7Q8NE18 718 aaKnown RBP12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 IL27Q8NEV9 243 aa12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 OR6J1Q8NGC5 347 aa12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 BICD2Q8TD16 824 aa12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 SP7Q8TDD2 431 aaPredicted RBP12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 WASF1Q92558 559 aa12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 HTATIP2Q9BUP3 242 aa12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 DYNC1LI2O43237 492 aaPredicted RBP12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 JAK2O60674 1132 aa12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 STAM2O75886 525 aa12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 RGS20O76081 388 aa12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 CD2BP2O95400 341 aaKnown RBP12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 COL6A1P12109 1028 aa12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 XBP1P17861 261 aa12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 CST5P28325 142 aaPredicted RBP12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 BEX3Q00994 111 aa12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 FSCN1Q16658 493 aaKnown RBP12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 LY6KQ17RY6 165 aa12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 GNASQ5JWF2 1037 aa12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 XRRA1Q6P2D8 792 aa12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 CCDC62Q6P9F0 684 aa12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 PCSK9Q8NBP7 692 aaKnown RBP12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 RASGRP4Q8TDF6 673 aa12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 COPS5Q92905 334 aa12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 FERMT2Q96AC1 680 aa12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 SENP6Q9GZR1 1112 aaPredicted RBP12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 RTEL1Q9NZ71 1219 aa12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 PHF24Q9UPV7 400 aa12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 Q9Y3F1 56 aa12.11□□□□□ -0.47
HNRNPC-232ENST00000557442 A0A1W2PQ45 241 aaPredicted RBP12.1□□□□□ -0.47
HNRNPC-232ENST00000557442 A0A1W2PQY0 241 aa12.1□□□□□ -0.47
HNRNPC-232ENST00000557442 ADAMTS3O15072 1205 aa12.1□□□□□ -0.47
HNRNPC-232ENST00000557442 CTAGE5O15320 804 aa12.1□□□□□ -0.47
HNRNPC-232ENST00000557442 GH1P01241 217 aa12.1□□□□□ -0.47
HNRNPC-232ENST00000557442 FDPSP14324 419 aaKnown RBP12.1□□□□□ -0.47
HNRNPC-232ENST00000557442 UBA1P22314 1058 aaKnown RBP12.1□□□□□ -0.47
HNRNPC-232ENST00000557442 SREBF1P36956 1147 aa12.1□□□□□ -0.47
HNRNPC-232ENST00000557442 CPT1AP50416 773 aa12.1□□□□□ -0.47
HNRNPC-232ENST00000557442 ACLYP53396 1101 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms