RNA–Protein interactions for RNA: ENST00000557168.1

TRAV30-201, Transcript of T cell receptor alpha variable 30, humanhuman

APPRIS P1 BASIC

Gene TRAV30, Length 337 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30-201ENST00000557168 AGBL1Q96MI9 1066 aa5.73□□□□□ -1.49
TRAV30-201ENST00000557168 PURBQ96QR8 312 aaKnown RBP5.73□□□□□ -1.49
TRAV30-201ENST00000557168 RIOK1Q9BRS2 568 aaKnown RBP5.73□□□□□ -1.49
TRAV30-201ENST00000557168 UPF3AQ9H1J1 476 aaKnown RBP5.73□□□□□ -1.49
TRAV30-201ENST00000557168 NUP62CLQ9H1M0 184 aa5.73□□□□□ -1.49
TRAV30-201ENST00000557168 EHD4Q9H223 541 aa5.73□□□□□ -1.49
TRAV30-201ENST00000557168 MTIF3Q9H2K0 278 aaKnown RBP5.73□□□□□ -1.49
TRAV30-201ENST00000557168 VCPKMTQ9H867 229 aa5.73□□□□□ -1.49
TRAV30-201ENST00000557168 SPC25Q9HBM1 224 aa5.73□□□□□ -1.49
TRAV30-201ENST00000557168 ARHGEF10LQ9HCE6 1279 aa5.73□□□□□ -1.49
TRAV30-201ENST00000557168 RAVER2Q9HCJ3 691 aaKnown RBP5.73□□□□□ -1.49
TRAV30-201ENST00000557168 HOMER2Q9NSB8 354 aa5.73□□□□□ -1.49
TRAV30-201ENST00000557168 TRMT13Q9NUP7 481 aaKnown RBP5.73□□□□□ -1.49
TRAV30-201ENST00000557168 NRBP1Q9UHY1 535 aa5.73□□□□□ -1.49
TRAV30-201ENST00000557168 ZNF214Q9UL59 606 aaPredicted RBP5.73□□□□□ -1.49
TRAV30-201ENST00000557168 PPP1R9AQ9ULJ8 1098 aa5.73□□□□□ -1.49
TRAV30-201ENST00000557168 COG5Q9UP83 839 aa5.73□□□□□ -1.49
TRAV30-201ENST00000557168 TMX2Q9Y320 296 aa5.73□□□□□ -1.49
TRAV30-201ENST00000557168 R3HCC1Q9Y3T6 440 aaKnown RBP5.73□□□□□ -1.49
TRAV30-201ENST00000557168 KIF3AQ9Y496 699 aa5.73□□□□□ -1.49
TRAV30-201ENST00000557168 MRVI1Q9Y6F6 885 aa5.73□□□□□ -1.49
TRAV30-201ENST00000557168 WDFY4Q6ZS81 3184 aa5.73□□□□□ -1.49
TRAV30-201ENST00000557168 MROH7Q68CQ1 1323 aa5.73□□□□□ -1.49
TRAV30-201ENST00000557168 WDR19Q8NEZ3 1342 aa5.73□□□□□ -1.49
TRAV30-201ENST00000557168 ZNF318Q5VUA4 2279 aa5.72□□□□□ -1.49
TRAV30-201ENST00000557168 VPS37CA5D8V6 355 aaPredicted RBP5.72□□□□□ -1.49
TRAV30-201ENST00000557168 WDR46O15213 610 aaKnown RBP5.72□□□□□ -1.49
TRAV30-201ENST00000557168 PTMAP06454 111 aaKnown RBP5.72□□□□□ -1.49
TRAV30-201ENST00000557168 ZFYP08048 801 aaPredicted RBP5.72□□□□□ -1.49
TRAV30-201ENST00000557168 HSPD1P10809 573 aaKnown RBP5.72□□□□□ -1.49
TRAV30-201ENST00000557168 KCNA5P22460 613 aa5.72□□□□□ -1.49
TRAV30-201ENST00000557168 CST5P28325 142 aaPredicted RBP5.72□□□□□ -1.49
TRAV30-201ENST00000557168 CDC25BP30305 580 aa5.72□□□□□ -1.49
TRAV30-201ENST00000557168 CDK8P49336 464 aa5.72□□□□□ -1.49
TRAV30-201ENST00000557168 SNAP25P60880 206 aa5.72□□□□□ -1.49
TRAV30-201ENST00000557168 TNFAIP2Q03169 654 aa5.72□□□□□ -1.49
TRAV30-201ENST00000557168 TYRO3Q06418 890 aa5.72□□□□□ -1.49
TRAV30-201ENST00000557168 SCRN1Q12765 414 aa5.72□□□□□ -1.49
TRAV30-201ENST00000557168 LRRFIP1Q32MZ4 808 aaKnown RBP5.72□□□□□ -1.49
TRAV30-201ENST00000557168 TMEM179Q6ZVK1 233 aa5.72□□□□□ -1.49
TRAV30-201ENST00000557168 ARMCX2Q7L311 632 aa5.72□□□□□ -1.49
TRAV30-201ENST00000557168 FAM178BQ8IXR5 827 aa5.72□□□□□ -1.49
TRAV30-201ENST00000557168 CCDC144CPQ8IYA2 1237 aa5.72□□□□□ -1.49
TRAV30-201ENST00000557168 RPUSD2Q8IZ73 545 aaKnown RBP5.72□□□□□ -1.49
TRAV30-201ENST00000557168 ANKRD35Q8N283 1001 aa5.72□□□□□ -1.49
TRAV30-201ENST00000557168 SLC43A3Q8NBI5 491 aa5.72□□□□□ -1.49
TRAV30-201ENST00000557168 ENGASEQ8NFI3 743 aa5.72□□□□□ -1.49
TRAV30-201ENST00000557168 KIFC2Q96AC6 838 aa5.72□□□□□ -1.49
TRAV30-201ENST00000557168 SPATA32Q96LK8 384 aa5.72□□□□□ -1.49
TRAV30-201ENST00000557168 FTOQ9C0B1 505 aaKnown RBP eCLIP5.72□□□□□ -1.49
TRAV30-201ENST00000557168 KATNBL1Q9H079 304 aa5.72□□□□□ -1.49
TRAV30-201ENST00000557168 ARMT1Q9H993 441 aa5.72□□□□□ -1.49
TRAV30-201ENST00000557168 CBX8Q9HC52 389 aa5.72□□□□□ -1.49
TRAV30-201ENST00000557168 KCND1Q9NSA2 647 aa5.72□□□□□ -1.49
TRAV30-201ENST00000557168 PAG1Q9NWQ8 432 aa5.72□□□□□ -1.49
TRAV30-201ENST00000557168 DACT1Q9NYF0 836 aa5.72□□□□□ -1.49
TRAV30-201ENST00000557168 CTNNA3Q9UI47 895 aa5.72□□□□□ -1.49
TRAV30-201ENST00000557168 ADAMTS5Q9UNA0 930 aa5.72□□□□□ -1.49
TRAV30-201ENST00000557168 DIS3Q9Y2L1 958 aaKnown RBP5.72□□□□□ -1.49
TRAV30-201ENST00000557168 COL4A4P53420 1690 aaPredicted RBP5.72□□□□□ -1.49
TRAV30-201ENST00000557168 ZFHX2Q9C0A1 2572 aaPredicted RBP5.71□□□□□ -1.49
TRAV30-201ENST00000557168 DNAJC25-GNG10A0A024R161 153 aa5.71□□□□□ -1.5
TRAV30-201ENST00000557168 UQCRHLA0A096LP55 91 aa5.71□□□□□ -1.5
TRAV30-201ENST00000557168 A0A1W2PQ27 194 aa5.71□□□□□ -1.5
TRAV30-201ENST00000557168 A0A1W2PQ64 194 aa5.71□□□□□ -1.5
TRAV30-201ENST00000557168 A0A1W2PQD8 194 aa5.71□□□□□ -1.5
TRAV30-201ENST00000557168 SOWAHBA6NEL2 793 aa5.71□□□□□ -1.5
TRAV30-201ENST00000557168 GOLGA6L6A8MZA4 724 aa5.71□□□□□ -1.5
TRAV30-201ENST00000557168 PRR33A8MZF0 331 aa5.71□□□□□ -1.5
TRAV30-201ENST00000557168 H3BQ06 376 aaPredicted RBP5.71□□□□□ -1.5
TRAV30-201ENST00000557168 JAK2O60674 1132 aa5.71□□□□□ -1.5
TRAV30-201ENST00000557168 UQCRHP07919 91 aa5.71□□□□□ -1.5
TRAV30-201ENST00000557168 MYL3P08590 195 aa5.71□□□□□ -1.5
TRAV30-201ENST00000557168 SMPD1P17405 629 aa5.71□□□□□ -1.5
TRAV30-201ENST00000557168 POU3F3P20264 500 aaPredicted RBP5.71□□□□□ -1.5
TRAV30-201ENST00000557168 PDIA3P30101 505 aaKnown RBP5.71□□□□□ -1.5
TRAV30-201ENST00000557168 SNW1Q13573 536 aaKnown RBP5.71□□□□□ -1.5
TRAV30-201ENST00000557168 IQCB1Q15051 598 aa5.71□□□□□ -1.5
TRAV30-201ENST00000557168 TCTN1Q2MV58 587 aa5.71□□□□□ -1.5
TRAV30-201ENST00000557168 FAM47CQ5HY64 1035 aa5.71□□□□□ -1.5
TRAV30-201ENST00000557168 MAMDC4Q6UXC1 1216 aa5.71□□□□□ -1.5
TRAV30-201ENST00000557168 HFE2Q6ZVN8 426 aa5.71□□□□□ -1.5
TRAV30-201ENST00000557168 TLK2Q86UE8 772 aa5.71□□□□□ -1.5
TRAV30-201ENST00000557168 HERC6Q8IVU3 1022 aa5.71□□□□□ -1.5
TRAV30-201ENST00000557168 BRF1Q92994 677 aa5.71□□□□□ -1.5
TRAV30-201ENST00000557168 ZNF396Q96N95 335 aaPredicted RBP5.71□□□□□ -1.5
TRAV30-201ENST00000557168 SEC62Q99442 399 aaKnown RBP5.71□□□□□ -1.5
TRAV30-201ENST00000557168 CRNKL1Q9BZJ0 848 aaKnown RBP5.71□□□□□ -1.5
TRAV30-201ENST00000557168 TNMDQ9H2S6 317 aa5.71□□□□□ -1.5
TRAV30-201ENST00000557168 KCNF1Q9H3M0 494 aa5.71□□□□□ -1.5
TRAV30-201ENST00000557168 UBE2ZQ9H832 354 aaPredicted RBP5.71□□□□□ -1.5
TRAV30-201ENST00000557168 DCP1AQ9NPI6 582 aaPredicted RBP5.71□□□□□ -1.5
TRAV30-201ENST00000557168 FAM86C1Q9NVL1 165 aa5.71□□□□□ -1.5
TRAV30-201ENST00000557168 RTEL1Q9NZ71 1219 aa5.71□□□□□ -1.5
TRAV30-201ENST00000557168 CTDP1Q9Y5B0 961 aaPredicted RBP5.71□□□□□ -1.5
TRAV30-201ENST00000557168 ZNF532Q9HCE3 1301 aa5.71□□□□□ -1.5
TRAV30-201ENST00000557168 TECTAO75443 2155 aa5.7□□□□□ -1.5
TRAV30-201ENST00000557168 MYH4Q9Y623 1939 aa5.7□□□□□ -1.5
TRAV30-201ENST00000557168 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.7□□□□□ -1.5
TRAV30-201ENST00000557168 FAM237AA0A1B0GTK4 181 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms