RNA–Protein interactions for RNA: ENST00000556687.5

RBM23-222, Transcript of RNA binding motif protein 23, human

TSL 2

Gene RBM23, Length 1,124 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM23-222	ENST00000556687	PURA	Q00577	322 aa	Known RBP	14.15	□□□□□ -0.14
RBM23-222	ENST00000556687	KRT32	Q14532	448 aa		14.15	□□□□□ -0.14
RBM23-222	ENST00000556687	PGM5	Q15124	567 aa		14.15	□□□□□ -0.14
RBM23-222	ENST00000556687	SHH	Q15465	462 aa		14.15	□□□□□ -0.14
RBM23-222	ENST00000556687	LRIT3	Q3SXY7	679 aa		14.15	□□□□□ -0.14
RBM23-222	ENST00000556687	C9orf50	Q5SZB4	431 aa		14.15	□□□□□ -0.14
RBM23-222	ENST00000556687	APOA5	Q6Q788	366 aa		14.15	□□□□□ -0.14
RBM23-222	ENST00000556687	TMTC3	Q6ZXV5	915 aa		14.15	□□□□□ -0.14
RBM23-222	ENST00000556687	VSIG10L	Q86VR7	867 aa		14.15	□□□□□ -0.14
RBM23-222	ENST00000556687	PPP1R13L	Q8WUF5	828 aa		14.15	□□□□□ -0.14
RBM23-222	ENST00000556687	POLR3E	Q9NVU0	708 aa		14.15	□□□□□ -0.14
RBM23-222	ENST00000556687	DDX41	Q9UJV9	622 aa	Known RBP	14.15	□□□□□ -0.14
RBM23-222	ENST00000556687	MROH7	Q68CQ1	1323 aa		14.15	□□□□□ -0.15
RBM23-222	ENST00000556687	LAMA3	Q16787	3333 aa		14.14	□□□□□ -0.15
RBM23-222	ENST00000556687	TIMP1	P01033	207 aa		14.14	□□□□□ -0.15
RBM23-222	ENST00000556687	ARHGAP1	Q07960	439 aa		14.14	□□□□□ -0.15
RBM23-222	ENST00000556687	USP17L6P	Q6QN14	398 aa		14.14	□□□□□ -0.15
RBM23-222	ENST00000556687	SYNE3	Q6ZMZ3	975 aa		14.14	□□□□□ -0.15
RBM23-222	ENST00000556687	AFG1L	Q8WV93	481 aa		14.14	□□□□□ -0.15
RBM23-222	ENST00000556687	JAKMIP1	Q96N16	626 aa	Known RBP	14.14	□□□□□ -0.15
RBM23-222	ENST00000556687	TRPV6	Q9H1D0	765 aa		14.14	□□□□□ -0.15
RBM23-222	ENST00000556687	SEC63	Q9UGP8	760 aa	Known RBP	14.14	□□□□□ -0.15
RBM23-222	ENST00000556687	KLF18	A0A0U1RQI7	1052 aa		14.13	□□□□□ -0.15
RBM23-222	ENST00000556687	MEIS2	O14770	477 aa		14.13	□□□□□ -0.15
RBM23-222	ENST00000556687	TLR3	O15455	904 aa	Known RBP	14.13	□□□□□ -0.15
RBM23-222	ENST00000556687	GH1	P01241	217 aa		14.13	□□□□□ -0.15
RBM23-222	ENST00000556687	BRDT	Q58F21	947 aa	Predicted RBP	14.13	□□□□□ -0.15
RBM23-222	ENST00000556687	ERICH6B	Q5W0A0	696 aa		14.13	□□□□□ -0.15
RBM23-222	ENST00000556687	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	14.13	□□□□□ -0.15
RBM23-222	ENST00000556687	MTG1	Q9BT17	334 aa	Predicted RBP	14.13	□□□□□ -0.15
RBM23-222	ENST00000556687	PPP1R12C	Q9BZL4	782 aa		14.13	□□□□□ -0.15
RBM23-222	ENST00000556687	FAM217B	Q9NTX9	383 aa	Predicted RBP	14.13	□□□□□ -0.15
RBM23-222	ENST00000556687	MRVI1	Q9Y6F6	885 aa		14.13	□□□□□ -0.15
RBM23-222	ENST00000556687	SCN10A	Q9Y5Y9	1956 aa		14.13	□□□□□ -0.15
RBM23-222	ENST00000556687	ZBTB43	O43298	467 aa		14.12	□□□□□ -0.15
RBM23-222	ENST00000556687	SORBS3	O60504	671 aa		14.12	□□□□□ -0.15
RBM23-222	ENST00000556687	B4GALT4	O60513	344 aa		14.12	□□□□□ -0.15
RBM23-222	ENST00000556687	REC8	O95072	547 aa		14.12	□□□□□ -0.15
RBM23-222	ENST00000556687	HMGB1	P09429	215 aa	Known RBP	14.12	□□□□□ -0.15
RBM23-222	ENST00000556687	CDC27	P30260	824 aa		14.12	□□□□□ -0.15
RBM23-222	ENST00000556687	CCND2	P30279	289 aa		14.12	□□□□□ -0.15
RBM23-222	ENST00000556687	CYP2C18	P33260	490 aa		14.12	□□□□□ -0.15
RBM23-222	ENST00000556687	MRPS9	P82933	396 aa	Known RBP	14.12	□□□□□ -0.15
RBM23-222	ENST00000556687	SP2	Q02086	613 aa		14.12	□□□□□ -0.15
RBM23-222	ENST00000556687	FPGS	Q05932	587 aa		14.12	□□□□□ -0.15
RBM23-222	ENST00000556687	APOBR	Q0VD83	1088 aa		14.12	□□□□□ -0.15
RBM23-222	ENST00000556687	FUT2	Q10981	343 aa		14.12	□□□□□ -0.15
RBM23-222	ENST00000556687	NBPF20	Q3BBV1	942 aa		14.12	□□□□□ -0.15
RBM23-222	ENST00000556687	MFSD5	Q6N075	450 aa		14.12	□□□□□ -0.15
RBM23-222	ENST00000556687		Q6ZUG5	572 aa		14.12	□□□□□ -0.15
RBM23-222	ENST00000556687	SMARCC2	Q8TAQ2	1214 aa		14.12	□□□□□ -0.15
RBM23-222	ENST00000556687	BCAS3	Q9H6U6	928 aa		14.12	□□□□□ -0.15
RBM23-222	ENST00000556687	UMODL1	Q5DID0	1318 aa		14.12	□□□□□ -0.15
RBM23-222	ENST00000556687	KPNA6	O60684	536 aa		14.11	□□□□□ -0.15
RBM23-222	ENST00000556687	CENPB	P07199	599 aa	Predicted RBP	14.11	□□□□□ -0.15
RBM23-222	ENST00000556687	MMP3	P08254	477 aa		14.11	□□□□□ -0.15
RBM23-222	ENST00000556687	CHMP4BP1	P59074	171 aa		14.11	□□□□□ -0.15
RBM23-222	ENST00000556687	RTN1	Q16799	776 aa		14.11	□□□□□ -0.15
RBM23-222	ENST00000556687	BLOC1S2	Q6QNY1	142 aa		14.11	□□□□□ -0.15
RBM23-222	ENST00000556687	C16orf59	Q7L2K0	433 aa		14.11	□□□□□ -0.15
RBM23-222	ENST00000556687	SEZ6L	Q9BYH1	1024 aa		14.11	□□□□□ -0.15
RBM23-222	ENST00000556687	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	14.11	□□□□□ -0.15
RBM23-222	ENST00000556687	PSTPIP2	Q9H939	334 aa		14.11	□□□□□ -0.15
RBM23-222	ENST00000556687	TRMT13	Q9NUP7	481 aa	Known RBP	14.11	□□□□□ -0.15
RBM23-222	ENST00000556687	RBM28	Q9NW13	759 aa	Known RBP	14.11	□□□□□ -0.15
RBM23-222	ENST00000556687	RTEL1	Q9NZ71	1219 aa		14.11	□□□□□ -0.15
RBM23-222	ENST00000556687	NAP1L2	Q9ULW6	460 aa	Predicted RBP	14.11	□□□□□ -0.15
RBM23-222	ENST00000556687	FRMPD4	Q14CM0	1322 aa		14.11	□□□□□ -0.15
RBM23-222	ENST00000556687	CNTNAP5	Q8WYK1	1306 aa		14.11	□□□□□ -0.15
RBM23-222	ENST00000556687	GOLGA8A	A7E2F4	631 aa		14.1	□□□□□ -0.15
RBM23-222	ENST00000556687	GOLGA8B	A8MQT2	603 aa		14.1	□□□□□ -0.15
RBM23-222	ENST00000556687	PIK3CD	O00329	1044 aa		14.1	□□□□□ -0.15
RBM23-222	ENST00000556687	CSF2RA	P15509	400 aa		14.1	□□□□□ -0.15
RBM23-222	ENST00000556687	RPS6KB1	P23443	525 aa		14.1	□□□□□ -0.15
RBM23-222	ENST00000556687	ADD1	P35611	737 aa	Known RBP	14.1	□□□□□ -0.15
RBM23-222	ENST00000556687	FGD1	P98174	961 aa		14.1	□□□□□ -0.15
RBM23-222	ENST00000556687	UBE2S	Q16763	222 aa		14.1	□□□□□ -0.15
RBM23-222	ENST00000556687	FAM47C	Q5HY64	1035 aa		14.1	□□□□□ -0.15
RBM23-222	ENST00000556687	MYSM1	Q5VVJ2	828 aa		14.1	□□□□□ -0.15
RBM23-222	ENST00000556687	HEATR3	Q7Z4Q2	680 aa		14.1	□□□□□ -0.15
RBM23-222	ENST00000556687	DHX37	Q8IY37	1157 aa	Known RBP	14.1	□□□□□ -0.15
RBM23-222	ENST00000556687	KAT2B	Q92831	832 aa		14.1	□□□□□ -0.15
RBM23-222	ENST00000556687	BRF1	Q92994	677 aa		14.1	□□□□□ -0.15
RBM23-222	ENST00000556687	CUL5	Q93034	780 aa		14.1	□□□□□ -0.15
RBM23-222	ENST00000556687	USP26	Q9BXU7	913 aa		14.1	□□□□□ -0.15
RBM23-222	ENST00000556687		V9GY48	417 aa	Predicted RBP	14.1	□□□□□ -0.15
RBM23-222	ENST00000556687	DOCK5	Q9H7D0	1870 aa		14.1	□□□□□ -0.15
RBM23-222	ENST00000556687	ABCB7	O75027	752 aa		14.09	□□□□□ -0.15
RBM23-222	ENST00000556687	GGPS1	O95749	300 aa		14.09	□□□□□ -0.15
RBM23-222	ENST00000556687	ACR	P10323	421 aa		14.09	□□□□□ -0.15
RBM23-222	ENST00000556687	CYP2C9	P11712	490 aa		14.09	□□□□□ -0.15
RBM23-222	ENST00000556687	CAST	P20810	708 aa	Known RBP	14.09	□□□□□ -0.15
RBM23-222	ENST00000556687	CCL23	P55773	120 aa		14.09	□□□□□ -0.15
RBM23-222	ENST00000556687	SEMA3F	Q13275	785 aa		14.09	□□□□□ -0.15
RBM23-222	ENST00000556687	LAMC2	Q13753	1193 aa		14.09	□□□□□ -0.15
RBM23-222	ENST00000556687	HSDL1	Q3SXM5	330 aa		14.09	□□□□□ -0.15
RBM23-222	ENST00000556687	CELF3	Q5SZQ8	465 aa	Known RBP	14.09	□□□□□ -0.15
RBM23-222	ENST00000556687	WWC2	Q6AWC2	1192 aa		14.09	□□□□□ -0.15
RBM23-222	ENST00000556687	TYW1B	Q6NUM6	668 aa		14.09	□□□□□ -0.15
RBM23-222	ENST00000556687	KCNV1	Q6PIU1	500 aa		14.09	□□□□□ -0.15

Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms