RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 TMOD2Q9NZR1 351 aa11.32□□□□□ -0.6
TMEM260-211ENST00000556648 NPHP3-ACAD11A0A0J9YXS1 232 aa11.31□□□□□ -0.6
TMEM260-211ENST00000556648 POTEB3A0JP26 581 aa11.31□□□□□ -0.6
TMEM260-211ENST00000556648 POTECB2RU33 542 aa11.31□□□□□ -0.6
TMEM260-211ENST00000556648 E9PMD0 336 aa11.31□□□□□ -0.6
TMEM260-211ENST00000556648 PES1O00541 588 aaKnown RBP11.31□□□□□ -0.6
TMEM260-211ENST00000556648 IDEP14735 1019 aa11.31□□□□□ -0.6
TMEM260-211ENST00000556648 FECHP22830 423 aa11.31□□□□□ -0.6
TMEM260-211ENST00000556648 EEF1GP26641 437 aaKnown RBP11.31□□□□□ -0.6
TMEM260-211ENST00000556648 CACNB1Q02641 598 aaPredicted RBP11.31□□□□□ -0.6
TMEM260-211ENST00000556648 PRR16Q569H4 304 aa11.31□□□□□ -0.6
TMEM260-211ENST00000556648 CNNM4Q6P4Q7 775 aa11.31□□□□□ -0.6
TMEM260-211ENST00000556648 POTEBQ6S5H4 581 aa11.31□□□□□ -0.6
TMEM260-211ENST00000556648 MIGA2Q7L4E1 593 aa11.31□□□□□ -0.6
TMEM260-211ENST00000556648 FAM151AQ8WW52 585 aa11.31□□□□□ -0.6
TMEM260-211ENST00000556648 MBOAT7Q96N66 472 aa11.31□□□□□ -0.6
TMEM260-211ENST00000556648 GLIS2Q9BZE0 524 aaPredicted RBP11.31□□□□□ -0.6
TMEM260-211ENST00000556648 RAB34Q9BZG1 259 aa11.31□□□□□ -0.6
TMEM260-211ENST00000556648 IRX2Q9BZI1 471 aaPredicted RBP11.31□□□□□ -0.6
TMEM260-211ENST00000556648 PDCL3Q9H2J4 239 aa11.31□□□□□ -0.6
TMEM260-211ENST00000556648 ZBTB21Q9ULJ3 1066 aa11.31□□□□□ -0.6
TMEM260-211ENST00000556648 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.31□□□□□ -0.6
TMEM260-211ENST00000556648 ADGRG1Q9Y653 693 aa11.31□□□□□ -0.6
TMEM260-211ENST00000556648 RASSF10A6NK89 507 aa11.31□□□□□ -0.6
TMEM260-211ENST00000556648 MED24O75448 989 aa11.31□□□□□ -0.6
TMEM260-211ENST00000556648 SLU7O95391 586 aaKnown RBP11.31□□□□□ -0.6
TMEM260-211ENST00000556648 SSBP05455 408 aaKnown RBP eCLIP11.31□□□□□ -0.6
TMEM260-211ENST00000556648 PRKCSHP14314 528 aaPredicted RBP11.31□□□□□ -0.6
TMEM260-211ENST00000556648 COASYQ13057 564 aa11.31□□□□□ -0.6
TMEM260-211ENST00000556648 BTNL9Q6UXG8 535 aa11.31□□□□□ -0.6
TMEM260-211ENST00000556648 CNGA4Q8IV77 575 aa11.31□□□□□ -0.6
TMEM260-211ENST00000556648 ETNPPLQ8TBG4 499 aa11.31□□□□□ -0.6
TMEM260-211ENST00000556648 LENG9Q96B70 501 aa11.31□□□□□ -0.6
TMEM260-211ENST00000556648 DNAJC19Q96DA6 116 aa11.31□□□□□ -0.6
TMEM260-211ENST00000556648 TUBGCP2Q9BSJ2 902 aa11.31□□□□□ -0.6
TMEM260-211ENST00000556648 MAGEC2Q9UBF1 373 aaPredicted RBP11.31□□□□□ -0.6
TMEM260-211ENST00000556648 HERC5Q9UII4 1024 aaKnown RBP11.31□□□□□ -0.6
TMEM260-211ENST00000556648 PCDHA12Q9UN75 941 aa11.31□□□□□ -0.6
TMEM260-211ENST00000556648 KIAA1024Q9UPX6 916 aa11.31□□□□□ -0.6
TMEM260-211ENST00000556648 CYP3A7-CYP3A51PA0A087WV96 503 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 TTC26A0AVF1 554 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 POTEFA5A3E0 1075 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 FAM86B1E9PN63 330 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 ABL1P00519 1130 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 FAM86B2P0C5J1 330 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 POTEIP0CG38 1075 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 CYP3A7P24462 503 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 MMP14P50281 582 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 GNG11P61952 73 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 EHHADHQ08426 723 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 SPIRE1Q08AE8 756 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 AP3B2Q13367 1082 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 ELF2Q15723 593 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 MIIPQ5JXC2 388 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 HYIQ5T013 277 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 CCDC174Q6PII3 467 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 POTEGQ6S5H5 508 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 POTEEQ6S8J3 1075 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 SAMD1Q6SPF0 538 aaPredicted RBP11.3□□□□□ -0.6
TMEM260-211ENST00000556648 SLC30A10Q6XR72 485 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 CYP2W1Q8TAV3 490 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 NOC3LQ8WTT2 800 aaKnown RBP11.3□□□□□ -0.6
TMEM260-211ENST00000556648 TBC1D5Q92609 795 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 KIFC2Q96AC6 838 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 GLT8D2Q9H1C3 349 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 LZTFL1Q9NQ48 299 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 TBC1D7Q9P0N9 293 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 PVALEFA0A1B0GWK0 134 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 BICDL2A1A5D9 508 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 KRT9P35527 623 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 USP11P51784 963 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 RAD51AP2Q09MP3 1159 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 SEMA3FQ13275 785 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 SYCP1Q15431 976 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 COBLL1Q53SF7 1204 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 CENPPQ6IPU0 288 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 NIM1KQ8IY84 436 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 ERO1AQ96HE7 468 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 CHP1Q99653 195 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 NAA15Q9BXJ9 866 aaKnown RBP11.3□□□□□ -0.6
TMEM260-211ENST00000556648 ARHGEF10LQ9HCE6 1279 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 HDAC9Q9UKV0 1011 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 ZNRF3Q9ULT6 936 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 TMX2Q9Y320 296 aa11.3□□□□□ -0.6
TMEM260-211ENST00000556648 URI1O94763 535 aaPredicted RBP11.29□□□□□ -0.6
TMEM260-211ENST00000556648 TPM1P09493 284 aa11.29□□□□□ -0.6
TMEM260-211ENST00000556648 CCDC175P0C221 793 aa11.29□□□□□ -0.6
TMEM260-211ENST00000556648 SREBF1P36956 1147 aa11.29□□□□□ -0.6
TMEM260-211ENST00000556648 MTIF2P46199 727 aaKnown RBP11.29□□□□□ -0.6
TMEM260-211ENST00000556648 STAT2P52630 851 aa11.29□□□□□ -0.6
TMEM260-211ENST00000556648 CXCL9Q07325 125 aa11.29□□□□□ -0.6
TMEM260-211ENST00000556648 TRIM14Q14142 442 aa11.29□□□□□ -0.6
TMEM260-211ENST00000556648 NBPF9Q3BBW0 867 aa11.29□□□□□ -0.6
TMEM260-211ENST00000556648 NCAPH2Q6IBW4 605 aa11.29□□□□□ -0.6
TMEM260-211ENST00000556648 PDCL2Q8N4E4 241 aa11.29□□□□□ -0.6
TMEM260-211ENST00000556648 CCDC51Q96ER9 411 aa11.29□□□□□ -0.6
TMEM260-211ENST00000556648 MAP7D2Q96T17 732 aa11.29□□□□□ -0.6
TMEM260-211ENST00000556648 PGAP2Q9UHJ9 254 aa11.29□□□□□ -0.6
TMEM260-211ENST00000556648 SPDYE3A6NKU9 549 aa11.28□□□□□ -0.6
TMEM260-211ENST00000556648 MEIS1O00470 390 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms