RNA–Protein interactions for RNA: ENST00000556631.1

KTN1-224, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 5,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-224ENST00000556631 MPNDQ8N594 471 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 KIF18AQ8NI77 898 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 PDCD6IPQ8WUM4 868 aaKnown RBP2.02□□□□□ -2.09
KTN1-224ENST00000556631 TSR2Q969E8 191 aaKnown RBP2.02□□□□□ -2.09
KTN1-224ENST00000556631 SH3KBP1Q96B97 665 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 GNL3Q9BVP2 549 aaKnown RBP eCLIP2.02□□□□□ -2.09
KTN1-224ENST00000556631 C12orf65Q9H3J6 166 aaKnown RBP2.02□□□□□ -2.09
KTN1-224ENST00000556631 ALKBH4Q9NXW9 302 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 CPA4Q9UI42 421 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 ZNF215Q9UL58 517 aaPredicted RBP2.02□□□□□ -2.09
KTN1-224ENST00000556631 WDR37Q9Y2I8 494 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 BTBD11A6QL63 1104 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 INO80B-WBP1J3KQ70 363 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 SPTLC1O15269 473 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 DYNC1LI2O43237 492 aaPredicted RBP2.02□□□□□ -2.09
KTN1-224ENST00000556631 PSMD3O43242 534 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 AP1G1O43747 822 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 SNX2O60749 519 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 RAD17O75943 681 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 KLHL18O94889 574 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 GUCA1CO95843 209 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 EZRP15311 586 aaKnown RBP2.02□□□□□ -2.09
KTN1-224ENST00000556631 TNFAIP2Q03169 654 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 CETN1Q12798 172 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 ILF2Q12905 390 aaKnown RBP2.02□□□□□ -2.09
KTN1-224ENST00000556631 KRT32Q14532 448 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 NCAPHQ15003 741 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 ZNF394Q53GI3 561 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 BRDTQ58F21 947 aaPredicted RBP2.02□□□□□ -2.09
KTN1-224ENST00000556631 CNSTQ6PJW8 725 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 BTNL9Q6UXG8 535 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 B4GALNT4Q76KP1 1039 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 TMC7Q7Z402 723 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 DNAJB7Q7Z6W7 309 aaPredicted RBP2.02□□□□□ -2.09
KTN1-224ENST00000556631 CNTROBQ8N137 903 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 SDR16C5Q8N3Y7 309 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 MYCT1Q8N699 235 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 PPM1NQ8N819 430 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 CEP70Q8NHQ1 597 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 SMARCC2Q8TAQ2 1214 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 SPATA18Q8TC71 538 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 PMEPA1Q969W9 287 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 RADILQ96JH8 1075 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 NLRP4Q96MN2 994 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 PHOX2BQ99453 314 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 APBA2Q99767 749 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 PANK2Q9BZ23 570 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 XPO4Q9C0E2 1151 aaKnown RBP2.02□□□□□ -2.09
KTN1-224ENST00000556631 WDR12Q9GZL7 423 aaKnown RBP2.02□□□□□ -2.09
KTN1-224ENST00000556631 VCX3BQ9H321 246 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 DNAJC17Q9NVM6 304 aaKnown RBP2.02□□□□□ -2.09
KTN1-224ENST00000556631 MRPL22Q9NWU5 206 aaKnown RBP2.02□□□□□ -2.09
KTN1-224ENST00000556631 LARSQ9P2J5 1176 aaKnown RBP2.02□□□□□ -2.09
KTN1-224ENST00000556631 CLIP2Q9UDT6 1046 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 PRKAG3Q9UGI9 489 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 KLHL3Q9UH77 587 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 PAIP2BQ9ULR5 123 aaKnown RBP2.02□□□□□ -2.09
KTN1-224ENST00000556631 BCS1LQ9Y276 419 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 DDX49Q9Y6V7 483 aaKnown RBP2.02□□□□□ -2.09
KTN1-224ENST00000556631 V9GY48 417 aaPredicted RBP2.02□□□□□ -2.09
KTN1-224ENST00000556631 TRAV20A0A0B4J274 112 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 RRN3P2A6NIE6 340 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 H0Y3Z8 333 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 GCOM1H8Y6P7 765 aaPredicted RBP2.01□□□□□ -2.09
KTN1-224ENST00000556631 K7ENM7 598 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 GTPBP1O00178 669 aaKnown RBP2.01□□□□□ -2.09
KTN1-224ENST00000556631 MAFKO60675 156 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 IVLP07476 585 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 ARAFP10398 606 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 CKBP12277 381 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 BDNFP23560 247 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 GBP1P32455 592 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 MAP2K2P36507 400 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 NPTX2P47972 431 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 CASP5P51878 434 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 RBM5P52756 815 aaKnown RBP eCLIP2.01□□□□□ -2.09
KTN1-224ENST00000556631 TUBA1BP68363 451 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 YWHAHQ04917 246 aaPredicted RBP2.01□□□□□ -2.09
KTN1-224ENST00000556631 CALCOCO2Q13137 446 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 DLGAP5Q15398 846 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 SNCBQ16143 134 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 CCDC14Q49A88 953 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 IFI44LQ53G44 452 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 C6orf163Q5TEZ5 329 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 EGFLAMQ63HQ2 1017 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 SNRNP48Q6IEG0 339 aaKnown RBP2.01□□□□□ -2.09
KTN1-224ENST00000556631 KLHL17Q6TDP4 642 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 TUBA1AQ71U36 451 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 CATSPER4Q7RTX7 472 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 MIER3Q7Z3K6 550 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 CACNA2D4Q7Z3S7 1137 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 GALNTL5Q7Z4T8 443 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 SPATA24Q86W54 205 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 RAB11FIP4Q86YS3 637 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 MPP5Q8N3R9 675 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 POMGNT2Q8NAT1 580 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 OR6P1Q8NGX9 317 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 AFG1LQ8WV93 481 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 AGBL1Q96MI9 1066 aa2.01□□□□□ -2.09
KTN1-224ENST00000556631 RUSC1Q9BVN2 902 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms