RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 SIP14410 1827 aa16.4■□□□□ 0.22
ACTN1-219ENST00000556432 CASTP20810 708 aaKnown RBP16.39■□□□□ 0.21
ACTN1-219ENST00000556432 LY6KQ17RY6 165 aa16.39■□□□□ 0.21
ACTN1-219ENST00000556432 TCTN1Q2MV58 587 aa16.39■□□□□ 0.21
ACTN1-219ENST00000556432 USH1GQ495M9 461 aa16.39■□□□□ 0.21
ACTN1-219ENST00000556432 TIGD5Q53EQ6 642 aa16.39■□□□□ 0.21
ACTN1-219ENST00000556432 RRP12Q5JTH9 1297 aaKnown RBP16.39■□□□□ 0.21
ACTN1-219ENST00000556432 SESTD1Q86VW0 696 aa16.39■□□□□ 0.21
ACTN1-219ENST00000556432 MYOCDQ8IZQ8 938 aa16.39■□□□□ 0.21
ACTN1-219ENST00000556432 MRPL38Q96DV4 380 aaKnown RBP16.39■□□□□ 0.21
ACTN1-219ENST00000556432 ALG1Q9BT22 464 aa16.39■□□□□ 0.21
ACTN1-219ENST00000556432 AMHP03971 560 aa16.38■□□□□ 0.21
ACTN1-219ENST00000556432 TOP1P11387 765 aaKnown RBP16.38■□□□□ 0.21
ACTN1-219ENST00000556432 DGKDQ16760 1214 aa16.38■□□□□ 0.21
ACTN1-219ENST00000556432 HDAC6Q9UBN7 1215 aa16.38■□□□□ 0.21
ACTN1-219ENST00000556432 GTF2IRD1Q9UHL9 959 aa16.38■□□□□ 0.21
ACTN1-219ENST00000556432 RBAK-RBAKDNI3L0D1 243 aa16.37■□□□□ 0.21
ACTN1-219ENST00000556432 RBL2Q08999 1139 aa16.37■□□□□ 0.21
ACTN1-219ENST00000556432 ZNF618Q5T7W0 954 aa16.37■□□□□ 0.21
ACTN1-219ENST00000556432 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.37■□□□□ 0.219e-13■■□□□ 12.7
ACTN1-219ENST00000556432 DHX37Q8IY37 1157 aaKnown RBP16.37■□□□□ 0.21
ACTN1-219ENST00000556432 KAT2BQ92831 832 aa16.37■□□□□ 0.21
ACTN1-219ENST00000556432 KATNAL1Q9BW62 490 aa16.37■□□□□ 0.21
ACTN1-219ENST00000556432 KCNH6Q9H252 994 aa16.37■□□□□ 0.21
ACTN1-219ENST00000556432 LGR5O75473 907 aa16.36■□□□□ 0.21
ACTN1-219ENST00000556432 ZNF286BP0CG31 522 aa16.36■□□□□ 0.21
ACTN1-219ENST00000556432 PSEN2P49810 448 aa16.36■□□□□ 0.21
ACTN1-219ENST00000556432 ZP2Q05996 745 aa16.36■□□□□ 0.21
ACTN1-219ENST00000556432 ARHGAP1Q07960 439 aa16.36■□□□□ 0.21
ACTN1-219ENST00000556432 PTK7Q13308 1070 aa16.36■□□□□ 0.21
ACTN1-219ENST00000556432 MFSD10Q14728 455 aa16.36■□□□□ 0.21
ACTN1-219ENST00000556432 EPC2Q52LR7 807 aa16.36■□□□□ 0.21
ACTN1-219ENST00000556432 ZMYM1Q5SVZ6 1142 aa16.36■□□□□ 0.21
ACTN1-219ENST00000556432 CCDC62Q6P9F0 684 aa16.36■□□□□ 0.21
ACTN1-219ENST00000556432 BANK1Q8NDB2 785 aa16.36■□□□□ 0.21
ACTN1-219ENST00000556432 NEK9Q8TD19 979 aa16.36■□□□□ 0.21
ACTN1-219ENST00000556432 YME1L1Q96TA2 773 aa16.36■□□□□ 0.21
ACTN1-219ENST00000556432 TMEM47Q9BQJ4 181 aa16.36■□□□□ 0.21
ACTN1-219ENST00000556432 WDR19Q8NEZ3 1342 aa16.36■□□□□ 0.21
ACTN1-219ENST00000556432 PDHBP11177 359 aa16.35■□□□□ 0.21
ACTN1-219ENST00000556432 KIAA0753Q2KHM9 967 aa16.35■□□□□ 0.21
ACTN1-219ENST00000556432 TCEAL5Q5H9L2 206 aa16.35■□□□□ 0.21
ACTN1-219ENST00000556432 HFE2Q6ZVN8 426 aa16.35■□□□□ 0.21
ACTN1-219ENST00000556432 PABPC5Q96DU9 382 aaKnown RBP16.35■□□□□ 0.21
ACTN1-219ENST00000556432 UPF3BQ9BZI7 483 aaKnown RBP16.35■□□□□ 0.21
ACTN1-219ENST00000556432 CLDND1Q9NY35 253 aa16.35■□□□□ 0.21
ACTN1-219ENST00000556432 EMSYQ7Z589 1322 aa16.35■□□□□ 0.21
ACTN1-219ENST00000556432 ORC4O43929 436 aa16.34■□□□□ 0.21
ACTN1-219ENST00000556432 UPP2O95045 317 aa16.34■□□□□ 0.21
ACTN1-219ENST00000556432 THPOP40225 353 aa16.34■□□□□ 0.21
ACTN1-219ENST00000556432 ZNF200P98182 395 aaPredicted RBP16.34■□□□□ 0.21
ACTN1-219ENST00000556432 ZNF543Q08ER8 600 aa16.34■□□□□ 0.21
ACTN1-219ENST00000556432 GPM6BQ13491 265 aa16.34■□□□□ 0.21
ACTN1-219ENST00000556432 MBTPS1Q14703 1052 aa16.34■□□□□ 0.21
ACTN1-219ENST00000556432 STXBP2Q15833 593 aa16.34■□□□□ 0.21
ACTN1-219ENST00000556432 ADHFE1Q8IWW8 467 aa16.34■□□□□ 0.21
ACTN1-219ENST00000556432 NSUN6Q8TEA1 469 aaKnown RBP16.34■□□□□ 0.21
ACTN1-219ENST00000556432 WNT8BQ93098 351 aa16.34■□□□□ 0.21
ACTN1-219ENST00000556432 SNX27Q96L92 541 aa16.34■□□□□ 0.21
ACTN1-219ENST00000556432 MFSD14AQ96MC6 490 aa16.34■□□□□ 0.21
ACTN1-219ENST00000556432 SAMD11Q96NU1 681 aa16.34■□□□□ 0.21
ACTN1-219ENST00000556432 NSUN3Q9H649 340 aaKnown RBP16.34■□□□□ 0.21
ACTN1-219ENST00000556432 PRKAG3Q9UGI9 489 aa16.34■□□□□ 0.21
ACTN1-219ENST00000556432 WDFY4Q6ZS81 3184 aa16.34■□□□□ 0.21
ACTN1-219ENST00000556432 POTEB3A0JP26 581 aa16.33■□□□□ 0.2
ACTN1-219ENST00000556432 NOVP48745 357 aa16.33■□□□□ 0.2
ACTN1-219ENST00000556432 POTEBQ6S5H4 581 aa16.33■□□□□ 0.2
ACTN1-219ENST00000556432 DBF4BQ8NFT6 615 aa16.33■□□□□ 0.2
ACTN1-219ENST00000556432 TAAR1Q96RJ0 339 aa16.33■□□□□ 0.2
ACTN1-219ENST00000556432 RMDN3Q96TC7 470 aa16.33■□□□□ 0.2
ACTN1-219ENST00000556432 ANAPC4Q9UJX5 808 aa16.33■□□□□ 0.2
ACTN1-219ENST00000556432 MRVI1Q9Y6F6 885 aa16.33■□□□□ 0.2
ACTN1-219ENST00000556432 RSPH10B2B2RC85 870 aa16.32■□□□□ 0.2
ACTN1-219ENST00000556432 H3BNC9 293 aa16.32■□□□□ 0.2
ACTN1-219ENST00000556432 FOXP2O15409 715 aa16.32■□□□□ 0.2
ACTN1-219ENST00000556432 SORBS3O60504 671 aa16.32■□□□□ 0.2
ACTN1-219ENST00000556432 F2P00734 622 aa16.32■□□□□ 0.2
ACTN1-219ENST00000556432 RSPH10BP0C881 870 aa16.32■□□□□ 0.2
ACTN1-219ENST00000556432 HTRA4P83105 476 aaPredicted RBP16.32■□□□□ 0.2
ACTN1-219ENST00000556432 CLUL1Q15846 466 aa16.32■□□□□ 0.2
ACTN1-219ENST00000556432 TRIM71Q2Q1W2 868 aaKnown RBP16.32■□□□□ 0.2
ACTN1-219ENST00000556432 VPS53Q5VIR6 699 aa16.32■□□□□ 0.2
ACTN1-219ENST00000556432 ARHGEF16Q5VV41 709 aa16.32■□□□□ 0.2
ACTN1-219ENST00000556432 TTC41PQ6P2S7 1318 aa16.32■□□□□ 0.2
ACTN1-219ENST00000556432 TRAF7Q6Q0C0 670 aa16.32■□□□□ 0.2
ACTN1-219ENST00000556432 TMEM192Q8IY95 271 aa16.32■□□□□ 0.2
ACTN1-219ENST00000556432 MIER1Q8N108 512 aa16.32■□□□□ 0.2
ACTN1-219ENST00000556432 RGS22Q8NE09 1264 aa16.32■□□□□ 0.2
ACTN1-219ENST00000556432 ANKS1AQ92625 1134 aa16.32■□□□□ 0.2
ACTN1-219ENST00000556432 GOLGA8HP0CJ92 632 aa16.31■□□□□ 0.2
ACTN1-219ENST00000556432 EIF2AK2P19525 551 aaKnown RBP16.31■□□□□ 0.2
ACTN1-219ENST00000556432 IRS1P35568 1242 aa16.31■□□□□ 0.2
ACTN1-219ENST00000556432 LAMC2Q13753 1193 aa16.31■□□□□ 0.2
ACTN1-219ENST00000556432 RPAINQ86UA6 219 aa16.31■□□□□ 0.2
ACTN1-219ENST00000556432 FBXO11Q86XK2 927 aa16.31■□□□□ 0.2
ACTN1-219ENST00000556432 PPTC7Q8NI37 304 aa16.31■□□□□ 0.2
ACTN1-219ENST00000556432 SP7Q8TDD2 431 aaPredicted RBP16.31■□□□□ 0.2
ACTN1-219ENST00000556432 SYTL5Q8TDW5 730 aaPredicted RBP16.31■□□□□ 0.2
ACTN1-219ENST00000556432 IWS1Q96ST2 819 aa16.31■□□□□ 0.2
ACTN1-219ENST00000556432 POP1Q99575 1024 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms