RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 TOB2Q14106 344 aaPredicted RBP13.27□□□□□ -0.29
SLIRP-206ENST00000556375 BRDTQ58F21 947 aaPredicted RBP13.27□□□□□ -0.29
SLIRP-206ENST00000556375 USP17L6PQ6QN14 398 aa13.27□□□□□ -0.29
SLIRP-206ENST00000556375 CXCL17Q6UXB2 119 aa13.27□□□□□ -0.29
SLIRP-206ENST00000556375 ANKRD33Q7Z3H0 272 aa13.27□□□□□ -0.29
SLIRP-206ENST00000556375 TEX2Q8IWB9 1127 aa13.27□□□□□ -0.29
SLIRP-206ENST00000556375 COPS5Q92905 334 aa13.27□□□□□ -0.29
SLIRP-206ENST00000556375 TOX2Q96NM4 488 aa13.27□□□□□ -0.29
SLIRP-206ENST00000556375 GDF15Q99988 308 aa13.27□□□□□ -0.29
SLIRP-206ENST00000556375 PSTPIP2Q9H939 334 aa13.27□□□□□ -0.29
SLIRP-206ENST00000556375 PDLIM7Q9NR12 457 aa13.27□□□□□ -0.29
SLIRP-206ENST00000556375 POLR3EQ9NVU0 708 aa13.27□□□□□ -0.29
SLIRP-206ENST00000556375 PRKAG2Q9UGJ0 569 aa13.27□□□□□ -0.29
SLIRP-206ENST00000556375 MRVI1Q9Y6F6 885 aa13.27□□□□□ -0.29
SLIRP-206ENST00000556375 A6NJR5 290 aa13.26□□□□□ -0.29
SLIRP-206ENST00000556375 PQBP1O60828 265 aaKnown RBP13.26□□□□□ -0.29
SLIRP-206ENST00000556375 STAM2O75886 525 aa13.26□□□□□ -0.29
SLIRP-206ENST00000556375 RGS20O76081 388 aa13.26□□□□□ -0.29
SLIRP-206ENST00000556375 GH1P01241 217 aa13.26□□□□□ -0.29
SLIRP-206ENST00000556375 CLTBP09497 229 aa13.26□□□□□ -0.29
SLIRP-206ENST00000556375 MAGEA10P43363 369 aaPredicted RBP13.26□□□□□ -0.29
SLIRP-206ENST00000556375 NAPAP54920 295 aa13.26□□□□□ -0.29
SLIRP-206ENST00000556375 HABP4Q5JVS0 413 aaKnown RBP13.26□□□□□ -0.29
SLIRP-206ENST00000556375 KCNV1Q6PIU1 500 aa13.26□□□□□ -0.29
SLIRP-206ENST00000556375 VTI1AQ96AJ9 217 aa13.26□□□□□ -0.29
SLIRP-206ENST00000556375 IL17RAQ96F46 866 aa13.26□□□□□ -0.29
SLIRP-206ENST00000556375 PRDM5Q9NQX1 630 aaPredicted RBP13.26□□□□□ -0.29
SLIRP-206ENST00000556375 RBM27Q9P2N5 1060 aaKnown RBP13.26□□□□□ -0.29
SLIRP-206ENST00000556375 DDX41Q9UJV9 622 aaKnown RBP13.26□□□□□ -0.29
SLIRP-206ENST00000556375 V9GY48 417 aaPredicted RBP13.26□□□□□ -0.29
SLIRP-206ENST00000556375 DOCK5Q9H7D0 1870 aa13.25□□□□□ -0.29
SLIRP-206ENST00000556375 A0A1W2PPC1 479 aa13.25□□□□□ -0.29
SLIRP-206ENST00000556375 DCDC2CA8MYV0 355 aa13.25□□□□□ -0.29
SLIRP-206ENST00000556375 STXBP3O00186 592 aa13.25□□□□□ -0.29
SLIRP-206ENST00000556375 ARVCFO00192 962 aa13.25□□□□□ -0.29
SLIRP-206ENST00000556375 PDIA3P30101 505 aaKnown RBP13.25□□□□□ -0.29
SLIRP-206ENST00000556375 BMP8BP34820 402 aa13.25□□□□□ -0.29
SLIRP-206ENST00000556375 CDK7P50613 346 aa13.25□□□□□ -0.29
SLIRP-206ENST00000556375 PURAQ00577 322 aaKnown RBP13.25□□□□□ -0.29
SLIRP-206ENST00000556375 ARHGAP1Q07960 439 aa13.25□□□□□ -0.29
SLIRP-206ENST00000556375 UBE2SQ16763 222 aa13.25□□□□□ -0.29
SLIRP-206ENST00000556375 PFKFB3Q16875 520 aaPredicted RBP13.25□□□□□ -0.29
SLIRP-206ENST00000556375 LY6KQ17RY6 165 aa13.25□□□□□ -0.29
SLIRP-206ENST00000556375 GNPTABQ3T906 1256 aa13.25□□□□□ -0.29
SLIRP-206ENST00000556375 TYW1BQ6NUM6 668 aa13.25□□□□□ -0.29
SLIRP-206ENST00000556375 XRRA1Q6P2D8 792 aa13.25□□□□□ -0.29
SLIRP-206ENST00000556375 SLC43A3Q8NBI5 491 aa13.25□□□□□ -0.29
SLIRP-206ENST00000556375 EMID1Q96A84 441 aaPredicted RBP13.25□□□□□ -0.29
SLIRP-206ENST00000556375 INPP4AQ96PE3 977 aaPredicted RBP13.25□□□□□ -0.29
SLIRP-206ENST00000556375 SEZ6LQ9BYH1 1024 aa13.25□□□□□ -0.29
SLIRP-206ENST00000556375 PDRG1Q9NUG6 133 aa13.25□□□□□ -0.29
SLIRP-206ENST00000556375 BARHL2Q9NY43 387 aa13.25□□□□□ -0.29
SLIRP-206ENST00000556375 SPDYE3A6NKU9 549 aa13.24□□□□□ -0.29
SLIRP-206ENST00000556375 KIAA0355O15063 1070 aa13.24□□□□□ -0.29
SLIRP-206ENST00000556375 KPNA6O60684 536 aa13.24□□□□□ -0.29
SLIRP-206ENST00000556375 MMP3P08254 477 aa13.24□□□□□ -0.29
SLIRP-206ENST00000556375 MYL3P08590 195 aa13.24□□□□□ -0.29
SLIRP-206ENST00000556375 TGFB3P10600 412 aa13.24□□□□□ -0.29
SLIRP-206ENST00000556375 SCG2P13521 617 aa13.24□□□□□ -0.29
SLIRP-206ENST00000556375 IFNAR1P17181 557 aa13.24□□□□□ -0.29
SLIRP-206ENST00000556375 ADCY7P51828 1080 aa13.24□□□□□ -0.29
SLIRP-206ENST00000556375 MRPS9P82933 396 aaKnown RBP13.24□□□□□ -0.29
SLIRP-206ENST00000556375 ITGA7Q13683 1181 aa13.24□□□□□ -0.29
SLIRP-206ENST00000556375 NTRK3Q16288 839 aa13.24□□□□□ -0.29
SLIRP-206ENST00000556375 PCNX4Q63HM2 1172 aa13.24□□□□□ -0.29
SLIRP-206ENST00000556375 FAM126BQ8IXS8 530 aa13.24□□□□□ -0.29
SLIRP-206ENST00000556375 ZNF274Q96GC6 653 aaPredicted RBP13.24□□□□□ -0.29
SLIRP-206ENST00000556375 LBHD1Q9BQE6 289 aaPredicted RBP13.24□□□□□ -0.29
SLIRP-206ENST00000556375 MTG1Q9BT17 334 aaPredicted RBP13.24□□□□□ -0.29
SLIRP-206ENST00000556375 RNF26Q9BY78 433 aaPredicted RBP13.24□□□□□ -0.29
SLIRP-206ENST00000556375 GLT8D2Q9H1C3 349 aa13.24□□□□□ -0.29
SLIRP-206ENST00000556375 RIC8AQ9NPQ8 531 aa13.24□□□□□ -0.29
SLIRP-206ENST00000556375 GRIN2DO15399 1336 aa13.23□□□□□ -0.29
SLIRP-206ENST00000556375 TRIM43BA6NCK2 446 aa13.23□□□□□ -0.29
SLIRP-206ENST00000556375 TLR3O15455 904 aaKnown RBP13.23□□□□□ -0.29
SLIRP-206ENST00000556375 PRPF3O43395 683 aaKnown RBP13.23□□□□□ -0.29
SLIRP-206ENST00000556375 UBA1P22314 1058 aaKnown RBP13.23□□□□□ -0.29
SLIRP-206ENST00000556375 ICAM3P32942 547 aa13.23□□□□□ -0.29
SLIRP-206ENST00000556375 CCT2P78371 535 aaKnown RBP13.23□□□□□ -0.29
SLIRP-206ENST00000556375 MDM2Q00987 491 aaPredicted RBP13.23□□□□□ -0.29
SLIRP-206ENST00000556375 FAAP100Q0VG06 881 aa13.23□□□□□ -0.29
SLIRP-206ENST00000556375 LAMC2Q13753 1193 aa13.23□□□□□ -0.29
SLIRP-206ENST00000556375 SH3RF1Q7Z6J0 888 aa13.23□□□□□ -0.29
SLIRP-206ENST00000556375 PPTC7Q8NI37 304 aa13.23□□□□□ -0.29
SLIRP-206ENST00000556375 AFG1LQ8WV93 481 aa13.23□□□□□ -0.29
SLIRP-206ENST00000556375 TRIM43Q96BQ3 446 aaPredicted RBP13.23□□□□□ -0.29
SLIRP-206ENST00000556375 EHMT1Q9H9B1 1298 aa13.23□□□□□ -0.29
SLIRP-206ENST00000556375 NCOA5Q9HCD5 579 aaKnown RBP13.23□□□□□ -0.29
SLIRP-206ENST00000556375 PCDH10Q9P2E7 1040 aa13.23□□□□□ -0.29
SLIRP-206ENST00000556375 TBX21Q9UL17 535 aa13.23□□□□□ -0.29
SLIRP-206ENST00000556375 LAMA3Q16787 3333 aa13.22□□□□□ -0.29
SLIRP-206ENST00000556375 ESYT2A0FGR8 921 aa13.22□□□□□ -0.29
SLIRP-206ENST00000556375 FIBPO43427 364 aa13.22□□□□□ -0.29
SLIRP-206ENST00000556375 SEC24BO95487 1268 aa13.22□□□□□ -0.29
SLIRP-206ENST00000556375 GGPS1O95749 300 aa13.22□□□□□ -0.29
SLIRP-206ENST00000556375 PSMC6P62333 389 aa13.22□□□□□ -0.29
SLIRP-206ENST00000556375 AKAP17AQ02040 695 aaKnown RBP13.22□□□□□ -0.29
SLIRP-206ENST00000556375 AP3B2Q13367 1082 aa13.22□□□□□ -0.29
SLIRP-206ENST00000556375 PKN1Q16512 942 aa13.22□□□□□ -0.29
SLIRP-206ENST00000556375 DHX37Q8IY37 1157 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms