RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 TMEM102Q8N9M5 508 aaPredicted RBP11.14□□□□□ -0.63
GTF2A1-204ENST00000556268 WFDC12Q8WWY7 111 aa11.14□□□□□ -0.63
GTF2A1-204ENST00000556268 FAM129BQ96TA1 746 aa11.14□□□□□ -0.63
GTF2A1-204ENST00000556268 CPA4Q9UI42 421 aa11.14□□□□□ -0.63
GTF2A1-204ENST00000556268 ARAP2Q8WZ64 1704 aa11.13□□□□□ -0.63
GTF2A1-204ENST00000556268 CIAO1O76071 339 aa11.13□□□□□ -0.63
GTF2A1-204ENST00000556268 GJB1P08034 283 aa11.13□□□□□ -0.63
GTF2A1-204ENST00000556268 SLC5A1P13866 664 aa11.13□□□□□ -0.63
GTF2A1-204ENST00000556268 NKAPLQ5M9Q1 402 aa11.13□□□□□ -0.63
GTF2A1-204ENST00000556268 PEAR1Q5VY43 1037 aaPredicted RBP11.13□□□□□ -0.63
GTF2A1-204ENST00000556268 FAM9BQ8IZU0 186 aa11.13□□□□□ -0.63
GTF2A1-204ENST00000556268 SHISA4Q96DD7 197 aa11.13□□□□□ -0.63
GTF2A1-204ENST00000556268 IDI2Q9BXS1 227 aa11.13□□□□□ -0.63
GTF2A1-204ENST00000556268 MRPL18Q9H0U6 180 aaKnown RBP11.13□□□□□ -0.63
GTF2A1-204ENST00000556268 USP40Q9NVE5 1235 aa11.13□□□□□ -0.63
GTF2A1-204ENST00000556268 SALL1Q9NSC2 1324 aa11.12□□□□□ -0.63
GTF2A1-204ENST00000556268 TM4SF5O14894 197 aa11.12□□□□□ -0.63
GTF2A1-204ENST00000556268 FSCN2O14926 492 aa11.12□□□□□ -0.63
GTF2A1-204ENST00000556268 GRK4P32298 578 aa11.12□□□□□ -0.63
GTF2A1-204ENST00000556268 GJA8P48165 433 aa11.12□□□□□ -0.63
GTF2A1-204ENST00000556268 SLFN5Q08AF3 891 aa11.12□□□□□ -0.63
GTF2A1-204ENST00000556268 TCP10Q12799 353 aa11.12□□□□□ -0.63
GTF2A1-204ENST00000556268 ALDH1L2Q3SY69 923 aa11.12□□□□□ -0.63
GTF2A1-204ENST00000556268 FOXD4L6Q3SYB3 417 aaPredicted RBP11.12□□□□□ -0.63
GTF2A1-204ENST00000556268 FOXD4L3Q6VB84 417 aaPredicted RBP11.12□□□□□ -0.63
GTF2A1-204ENST00000556268 TRMT2AQ8IZ69 625 aaKnown RBP11.12□□□□□ -0.63
GTF2A1-204ENST00000556268 SSBP4Q9BWG4 385 aaPredicted RBP11.12□□□□□ -0.63
GTF2A1-204ENST00000556268 PRO3102Q9H379 93 aa11.12□□□□□ -0.63
GTF2A1-204ENST00000556268 AFG3L2Q9Y4W6 797 aa11.12□□□□□ -0.63
GTF2A1-204ENST00000556268 SZT2Q5T011 3432 aa11.12□□□□□ -0.63
GTF2A1-204ENST00000556268 TRIOBPQ9H2D6 2365 aa11.11□□□□□ -0.63
GTF2A1-204ENST00000556268 E9PSI1 815 aa11.11□□□□□ -0.63
GTF2A1-204ENST00000556268 H3BRJ5 948 aa11.11□□□□□ -0.63
GTF2A1-204ENST00000556268 LDHBP07195 334 aaKnown RBP11.11□□□□□ -0.63
GTF2A1-204ENST00000556268 CAPN2P17655 700 aa11.11□□□□□ -0.63
GTF2A1-204ENST00000556268 PRDX5P30044 214 aa11.11□□□□□ -0.63
GTF2A1-204ENST00000556268 FAM117BQ6P1L5 589 aa11.11□□□□□ -0.63
GTF2A1-204ENST00000556268 NXPE3Q969Y0 559 aa11.11□□□□□ -0.63
GTF2A1-204ENST00000556268 SEMA6BQ9H3T3 888 aa11.11□□□□□ -0.63
GTF2A1-204ENST00000556268 GNL3LQ9NVN8 582 aaKnown RBP11.11□□□□□ -0.63
GTF2A1-204ENST00000556268 DENND2AQ9ULE3 1009 aa11.11□□□□□ -0.63
GTF2A1-204ENST00000556268 SOX13Q9UN79 622 aa11.11□□□□□ -0.63
GTF2A1-204ENST00000556268 SLC45A1Q9Y2W3 748 aa11.11□□□□□ -0.63
GTF2A1-204ENST00000556268 ATRNL1Q5VV63 1379 aa11.11□□□□□ -0.63
GTF2A1-204ENST00000556268 RANBP2P49792 3224 aaKnown RBP11.11□□□□□ -0.63
GTF2A1-204ENST00000556268 A0A0G2JLL6 359 aaPredicted RBP11.1□□□□□ -0.63
GTF2A1-204ENST00000556268 F8W735 103 aaPredicted RBP11.1□□□□□ -0.63
GTF2A1-204ENST00000556268 GPR182O15218 404 aa11.1□□□□□ -0.63
GTF2A1-204ENST00000556268 ENTPD3O75355 529 aa11.1□□□□□ -0.63
GTF2A1-204ENST00000556268 CCL5P13501 91 aa11.1□□□□□ -0.63
GTF2A1-204ENST00000556268 CD68P34810 354 aaPredicted RBP11.1□□□□□ -0.63
GTF2A1-204ENST00000556268 IL15P40933 162 aaPredicted RBP11.1□□□□□ -0.63
GTF2A1-204ENST00000556268 ORC1Q13415 861 aa11.1□□□□□ -0.63
GTF2A1-204ENST00000556268 FASTKD5Q7L8L6 764 aaKnown RBP11.1□□□□□ -0.63
GTF2A1-204ENST00000556268 PRRT2Q7Z6L0 340 aaPredicted RBP11.1□□□□□ -0.63
GTF2A1-204ENST00000556268 RAET1EQ8TD07 263 aa11.1□□□□□ -0.63
GTF2A1-204ENST00000556268 MEGF10Q96KG7 1140 aa11.1□□□□□ -0.63
GTF2A1-204ENST00000556268 CITED4Q96RK1 184 aa11.1□□□□□ -0.63
GTF2A1-204ENST00000556268 PARK7Q99497 189 aaKnown RBP11.1□□□□□ -0.63
GTF2A1-204ENST00000556268 AKTIPQ9H8T0 292 aa11.1□□□□□ -0.63
GTF2A1-204ENST00000556268 COPRSQ9NQ92 184 aa11.1□□□□□ -0.63
GTF2A1-204ENST00000556268 KCNK4Q9NYG8 393 aa11.1□□□□□ -0.63
GTF2A1-204ENST00000556268 ZHX2Q9Y6X8 837 aa11.1□□□□□ -0.63
GTF2A1-204ENST00000556268 GAKO14976 1311 aa11.09□□□□□ -0.63
GTF2A1-204ENST00000556268 CTNND1O60716 968 aaKnown RBP11.09□□□□□ -0.63
GTF2A1-204ENST00000556268 ALX3O95076 343 aa11.09□□□□□ -0.63
GTF2A1-204ENST00000556268 WISP1O95388 367 aa11.09□□□□□ -0.63
GTF2A1-204ENST00000556268 SGPL1O95470 568 aa11.09□□□□□ -0.63
GTF2A1-204ENST00000556268 IGHA2P01877 340 aa11.09□□□□□ -0.63
GTF2A1-204ENST00000556268 CYP2C8P10632 490 aa11.09□□□□□ -0.63
GTF2A1-204ENST00000556268 ITGB7P26010 798 aa11.09□□□□□ -0.63
GTF2A1-204ENST00000556268 PHKA1P46020 1223 aa11.09□□□□□ -0.63
GTF2A1-204ENST00000556268 ATP2B3Q16720 1220 aa11.09□□□□□ -0.63
GTF2A1-204ENST00000556268 SCYL3Q8IZE3 742 aa11.09□□□□□ -0.63
GTF2A1-204ENST00000556268 AGGF1Q8N302 714 aaeCLIP11.09□□□□□ -0.63
GTF2A1-204ENST00000556268 KLHL23Q8NBE8 558 aa11.09□□□□□ -0.63
GTF2A1-204ENST00000556268 DPF3Q92784 378 aa11.09□□□□□ -0.63
GTF2A1-204ENST00000556268 TP53INP1Q96A56 240 aa11.09□□□□□ -0.63
GTF2A1-204ENST00000556268 BHLHE41Q9C0J9 482 aaPredicted RBP11.09□□□□□ -0.63
GTF2A1-204ENST00000556268 BIN2Q9UBW5 565 aaPredicted RBP11.09□□□□□ -0.63
GTF2A1-204ENST00000556268 GABRQQ9UN88 632 aa11.09□□□□□ -0.63
GTF2A1-204ENST00000556268 MYPNQ86TC9 1320 aa11.09□□□□□ -0.63
GTF2A1-204ENST00000556268 DDTLA6NHG4 134 aaPredicted RBP11.08□□□□□ -0.64
GTF2A1-204ENST00000556268 DYRK3O43781 588 aa11.08□□□□□ -0.64
GTF2A1-204ENST00000556268 ZEB1P37275 1124 aaPredicted RBP11.08□□□□□ -0.64
GTF2A1-204ENST00000556268 RGS3P49796 1198 aa11.08□□□□□ -0.64
GTF2A1-204ENST00000556268 FCGRTP55899 365 aa11.08□□□□□ -0.64
GTF2A1-204ENST00000556268 TIMM10P62072 90 aa11.08□□□□□ -0.64
GTF2A1-204ENST00000556268 UBXN2AP68543 259 aa11.08□□□□□ -0.64
GTF2A1-204ENST00000556268 PRKCZQ05513 592 aa11.08□□□□□ -0.64
GTF2A1-204ENST00000556268 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.08□□□□□ -0.64
GTF2A1-204ENST00000556268 GALNT12Q8IXK2 581 aa11.08□□□□□ -0.64
GTF2A1-204ENST00000556268 TMEM130Q8N3G9 435 aa11.08□□□□□ -0.64
GTF2A1-204ENST00000556268 ZGPATQ8N5A5 531 aaKnown RBP11.08□□□□□ -0.64
GTF2A1-204ENST00000556268 ASAP3Q8TDY4 903 aa11.08□□□□□ -0.64
GTF2A1-204ENST00000556268 BSNDQ8WZ55 320 aa11.08□□□□□ -0.64
GTF2A1-204ENST00000556268 RNF208Q9H0X6 261 aa11.08□□□□□ -0.64
GTF2A1-204ENST00000556268 PDS5AQ29RF7 1337 aaKnown RBP11.08□□□□□ -0.64
GTF2A1-204ENST00000556268 GPR75-ASB3A0A0A6YYF3 556 aa11.07□□□□□ -0.64
GTF2A1-204ENST00000556268 ADORA1P30542 326 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms