RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 ZNF654Q8IZM8 581 aa7.43□□□□□ -1.22
TMEM260-209ENST00000556079 ARRDC4Q8NCT1 418 aa7.43□□□□□ -1.22
TMEM260-209ENST00000556079 MYLIPQ8WY64 445 aa7.43□□□□□ -1.22
TMEM260-209ENST00000556079 BADQ92934 168 aa7.43□□□□□ -1.22
TMEM260-209ENST00000556079 UPF3AQ9H1J1 476 aaKnown RBP7.43□□□□□ -1.22
TMEM260-209ENST00000556079 TTYH1Q9H313 450 aaPredicted RBP7.43□□□□□ -1.22
TMEM260-209ENST00000556079 SEMA6BQ9H3T3 888 aa7.43□□□□□ -1.22
TMEM260-209ENST00000556079 ABHD16BQ9H3Z7 469 aa7.43□□□□□ -1.22
TMEM260-209ENST00000556079 BCAS3Q9H6U6 928 aa7.43□□□□□ -1.22
TMEM260-209ENST00000556079 PRKAG2Q9UGJ0 569 aa7.43□□□□□ -1.22
TMEM260-209ENST00000556079 BRPF3Q9ULD4 1205 aa7.43□□□□□ -1.22
TMEM260-209ENST00000556079 GNEQ9Y223 722 aaKnown RBP7.43□□□□□ -1.22
TMEM260-209ENST00000556079 GRIN2DO15399 1336 aa7.43□□□□□ -1.22
TMEM260-209ENST00000556079 UMODL1Q5DID0 1318 aa7.43□□□□□ -1.22
TMEM260-209ENST00000556079 WDR19Q8NEZ3 1342 aa7.43□□□□□ -1.22
TMEM260-209ENST00000556079 CHD7Q9P2D1 2997 aa7.43□□□□□ -1.22
TMEM260-209ENST00000556079 TRIP12Q14669 1992 aaPredicted RBP7.42□□□□□ -1.22
TMEM260-209ENST00000556079 REV3LO60673 3130 aa7.42□□□□□ -1.22
TMEM260-209ENST00000556079 DUSP11O75319 330 aaKnown RBP7.42□□□□□ -1.22
TMEM260-209ENST00000556079 CFBP00751 764 aa7.42□□□□□ -1.22
TMEM260-209ENST00000556079 ASGR1P07306 291 aa7.42□□□□□ -1.22
TMEM260-209ENST00000556079 FDX1P10109 184 aa7.42□□□□□ -1.22
TMEM260-209ENST00000556079 GJA9P57773 515 aa7.42□□□□□ -1.22
TMEM260-209ENST00000556079 TRDNQ13061 729 aa7.42□□□□□ -1.22
TMEM260-209ENST00000556079 SNX17Q15036 470 aa7.42□□□□□ -1.22
TMEM260-209ENST00000556079 CCDC82Q8N4S0 544 aa7.42□□□□□ -1.22
TMEM260-209ENST00000556079 SRBD1Q8N5C6 995 aaKnown RBP7.42□□□□□ -1.22
TMEM260-209ENST00000556079 MAFAQ8NHW3 353 aaPredicted RBP7.42□□□□□ -1.22
TMEM260-209ENST00000556079 MORC4Q8TE76 937 aa7.42□□□□□ -1.22
TMEM260-209ENST00000556079 MTMR8Q96EF0 704 aa7.42□□□□□ -1.22
TMEM260-209ENST00000556079 DDX27Q96GQ7 796 aaKnown RBP7.42□□□□□ -1.22
TMEM260-209ENST00000556079 NRBP1Q9UHY1 535 aa7.42□□□□□ -1.22
TMEM260-209ENST00000556079 SCN10AQ9Y5Y9 1956 aa7.42□□□□□ -1.22
TMEM260-209ENST00000556079 BDP1A6H8Y1 2624 aa7.42□□□□□ -1.22
TMEM260-209ENST00000556079 ASB14A6NK59 587 aa7.41□□□□□ -1.22
TMEM260-209ENST00000556079 ZBTB5O15062 677 aa7.41□□□□□ -1.22
TMEM260-209ENST00000556079 RGS20O76081 388 aa7.41□□□□□ -1.22
TMEM260-209ENST00000556079 MYL3P08590 195 aa7.41□□□□□ -1.22
TMEM260-209ENST00000556079 EDNRBP24530 442 aa7.41□□□□□ -1.22
TMEM260-209ENST00000556079 CHMP4BP1P59074 171 aa7.41□□□□□ -1.22
TMEM260-209ENST00000556079 PDE4DQ08499 809 aa7.41□□□□□ -1.22
TMEM260-209ENST00000556079 FAAP100Q0VG06 881 aa7.41□□□□□ -1.22
TMEM260-209ENST00000556079 FSCN1Q16658 493 aaKnown RBP7.41□□□□□ -1.22
TMEM260-209ENST00000556079 UBE2SQ16763 222 aa7.41□□□□□ -1.22
TMEM260-209ENST00000556079 LY6KQ17RY6 165 aa7.41□□□□□ -1.22
TMEM260-209ENST00000556079 CCDC178Q5BJE1 867 aa7.41□□□□□ -1.22
TMEM260-209ENST00000556079 GNASQ5JWF2 1037 aa7.41□□□□□ -1.22
TMEM260-209ENST00000556079 NFXL1Q6ZNB6 911 aa7.41□□□□□ -1.22
TMEM260-209ENST00000556079 SEPT14Q6ZU15 432 aa7.41□□□□□ -1.22
TMEM260-209ENST00000556079 RNF180Q86T96 592 aa7.41□□□□□ -1.22
TMEM260-209ENST00000556079 FCHSD1Q86WN1 690 aa7.41□□□□□ -1.22
TMEM260-209ENST00000556079 MICU3Q86XE3 530 aa7.41□□□□□ -1.22
TMEM260-209ENST00000556079 MSL3Q8N5Y2 521 aaKnown RBP7.41□□□□□ -1.22
TMEM260-209ENST00000556079 VTI1AQ96AJ9 217 aa7.41□□□□□ -1.22
TMEM260-209ENST00000556079 WDR11Q9BZH6 1224 aa7.41□□□□□ -1.22
TMEM260-209ENST00000556079 PPP1R12CQ9BZL4 782 aa7.41□□□□□ -1.22
TMEM260-209ENST00000556079 TRPV6Q9H1D0 765 aa7.41□□□□□ -1.22
TMEM260-209ENST00000556079 RIOX1Q9H6W3 641 aa7.41□□□□□ -1.22
TMEM260-209ENST00000556079 STARD7Q9NQZ5 370 aa7.41□□□□□ -1.22
TMEM260-209ENST00000556079 PCDHA1Q9Y5I3 950 aa7.41□□□□□ -1.22
TMEM260-209ENST00000556079 SNX14Q9Y5W7 946 aa7.41□□□□□ -1.22
TMEM260-209ENST00000556079 ABCB11O95342 1321 aa7.41□□□□□ -1.22
TMEM260-209ENST00000556079 GBF1Q92538 1859 aa7.41□□□□□ -1.22
TMEM260-209ENST00000556079 TET1Q8NFU7 2136 aa7.4□□□□□ -1.22
TMEM260-209ENST00000556079 ERICH2A1L162 156 aa7.4□□□□□ -1.22
TMEM260-209ENST00000556079 NEFLP07196 543 aa7.4□□□□□ -1.22
TMEM260-209ENST00000556079 MYCLP12524 364 aaPredicted RBP7.4□□□□□ -1.22
TMEM260-209ENST00000556079 FOSL2P15408 326 aa7.4□□□□□ -1.22
TMEM260-209ENST00000556079 CST5P28325 142 aaPredicted RBP7.4□□□□□ -1.22
TMEM260-209ENST00000556079 CDC27P30260 824 aa7.4□□□□□ -1.22
TMEM260-209ENST00000556079 MCM5P33992 734 aa7.4□□□□□ -1.22
TMEM260-209ENST00000556079 HSD17B4P51659 736 aa7.4□□□□□ -1.22
TMEM260-209ENST00000556079 EXOSC10Q01780 885 aaKnown RBP7.4□□□□□ -1.22
TMEM260-209ENST00000556079 APOBRQ0VD83 1088 aa7.4□□□□□ -1.22
TMEM260-209ENST00000556079 TYW1BQ6NUM6 668 aa7.4□□□□□ -1.22
TMEM260-209ENST00000556079 USP17L6PQ6QN14 398 aa7.4□□□□□ -1.22
TMEM260-209ENST00000556079 CASC1Q6TDU7 716 aa7.4□□□□□ -1.22
TMEM260-209ENST00000556079 CATIPQ7Z7H3 387 aa7.4□□□□□ -1.22
TMEM260-209ENST00000556079 USP38Q8NB14 1042 aa7.4□□□□□ -1.22
TMEM260-209ENST00000556079 OR6J1Q8NGC5 347 aa7.4□□□□□ -1.22
TMEM260-209ENST00000556079 PGBD1Q96JS3 809 aa7.4□□□□□ -1.22
TMEM260-209ENST00000556079 JAKMIP1Q96N16 626 aaKnown RBP7.4□□□□□ -1.22
TMEM260-209ENST00000556079 RMDN3Q96TC7 470 aa7.4□□□□□ -1.22
TMEM260-209ENST00000556079 AMNQ9BXJ7 453 aa7.4□□□□□ -1.22
TMEM260-209ENST00000556079 VTA1Q9NP79 307 aa7.4□□□□□ -1.22
TMEM260-209ENST00000556079 PXMP2Q9NR77 195 aa7.4□□□□□ -1.22
TMEM260-209ENST00000556079 NCOR1O75376 2440 aa7.39□□□□□ -1.23
TMEM260-209ENST00000556079 MYO9BQ13459 2157 aa7.39□□□□□ -1.23
TMEM260-209ENST00000556079 CNTNAP5Q8WYK1 1306 aa7.39□□□□□ -1.23
TMEM260-209ENST00000556079 RBM47A0AV96 593 aaKnown RBP7.39□□□□□ -1.23
TMEM260-209ENST00000556079 CCDC69A6NI79 296 aa7.39□□□□□ -1.23
TMEM260-209ENST00000556079 DDAH1O94760 285 aa7.39□□□□□ -1.23
TMEM260-209ENST00000556079 CLTBP09497 229 aa7.39□□□□□ -1.23
TMEM260-209ENST00000556079 ZNF286BP0CG31 522 aa7.39□□□□□ -1.23
TMEM260-209ENST00000556079 ACRP10323 421 aa7.39□□□□□ -1.23
TMEM260-209ENST00000556079 TXNP10599 105 aaKnown RBP7.39□□□□□ -1.23
TMEM260-209ENST00000556079 CYP2C18P33260 490 aa7.39□□□□□ -1.23
TMEM260-209ENST00000556079 CDK7P50613 346 aa7.39□□□□□ -1.23
TMEM260-209ENST00000556079 SMAD3P84022 425 aaKnown RBP7.39□□□□□ -1.23
TMEM260-209ENST00000556079 SP2Q02086 613 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms