RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 DHX32Q7L7V1 743 aaKnown RBP21.26■□□□□ 0.99
NEDD1-208ENST00000555806 FANCBQ8NB91 859 aa21.26■□□□□ 0.99
NEDD1-208ENST00000555806 IL31RAQ8NI17 732 aa21.26■□□□□ 0.99
NEDD1-208ENST00000555806 AFG1LQ8WV93 481 aa21.26■□□□□ 0.99
NEDD1-208ENST00000555806 TRPV6Q9H1D0 765 aa21.26■□□□□ 0.99
NEDD1-208ENST00000555806 DDX41Q9UJV9 622 aaKnown RBP21.26■□□□□ 0.99
NEDD1-208ENST00000555806 CHMP4BP1P59074 171 aa21.25■□□□□ 0.99
NEDD1-208ENST00000555806 ARHGAP1Q07960 439 aa21.25■□□□□ 0.99
NEDD1-208ENST00000555806 PPIGQ13427 754 aaKnown RBP eCLIP21.25■□□□□ 0.99
NEDD1-208ENST00000555806 CCDC82Q8N4S0 544 aa21.25■□□□□ 0.99
NEDD1-208ENST00000555806 TMEM199Q8N511 208 aa21.25■□□□□ 0.99
NEDD1-208ENST00000555806 CUL5Q93034 780 aa21.25■□□□□ 0.99
NEDD1-208ENST00000555806 RNPC3Q96LT9 517 aaKnown RBP21.25■□□□□ 0.99
NEDD1-208ENST00000555806 ALDH8A1Q9H2A2 487 aaPredicted RBP21.25■□□□□ 0.99
NEDD1-208ENST00000555806 HIPK3Q9H422 1215 aa21.25■□□□□ 0.99
NEDD1-208ENST00000555806 MMP3P08254 477 aa21.24■□□□□ 0.99
NEDD1-208ENST00000555806 CYP2C18P33260 490 aa21.24■□□□□ 0.99
NEDD1-208ENST00000555806 FGD1P98174 961 aa21.24■□□□□ 0.99
NEDD1-208ENST00000555806 EXOSC10Q01780 885 aaKnown RBP21.24■□□□□ 0.99
NEDD1-208ENST00000555806 APOA5Q6Q788 366 aa21.24■□□□□ 0.99
NEDD1-208ENST00000555806 TMTC3Q6ZXV5 915 aa21.24■□□□□ 0.99
NEDD1-208ENST00000555806 VSIG10LQ86VR7 867 aa21.24■□□□□ 0.99
NEDD1-208ENST00000555806 DEFB123Q8N688 67 aa21.24■□□□□ 0.99
NEDD1-208ENST00000555806 SMARCC2Q8TAQ2 1214 aa21.24■□□□□ 0.99
NEDD1-208ENST00000555806 ZFP91Q96JP5 570 aaPredicted RBP21.24■□□□□ 0.99
NEDD1-208ENST00000555806 hCG_1642624A0A1W2PR95 340 aa21.23■□□□□ 0.99
NEDD1-208ENST00000555806 HMGB1P09429 215 aaKnown RBP21.23■□□□□ 0.99
NEDD1-208ENST00000555806 CSF2RAP15509 400 aa21.23■□□□□ 0.99
NEDD1-208ENST00000555806 NBPF20Q3BBV1 942 aa21.23■□□□□ 0.99
NEDD1-208ENST00000555806 Q7L0L9 218 aa21.23■□□□□ 0.99
NEDD1-208ENST00000555806 PPP1R13LQ8WUF5 828 aa21.23■□□□□ 0.99
NEDD1-208ENST00000555806 TRMT13Q9NUP7 481 aaKnown RBP21.23■□□□□ 0.99
NEDD1-208ENST00000555806 RBM28Q9NW13 759 aaKnown RBP21.23■□□□□ 0.99
NEDD1-208ENST00000555806 NAP1L2Q9ULW6 460 aaPredicted RBP21.23■□□□□ 0.99
NEDD1-208ENST00000555806 ZBTB43O43298 467 aa21.22■□□□□ 0.99
NEDD1-208ENST00000555806 SORBS3O60504 671 aa21.22■□□□□ 0.99
NEDD1-208ENST00000555806 RGS20O76081 388 aa21.22■□□□□ 0.99
NEDD1-208ENST00000555806 REC8O95072 547 aa21.22■□□□□ 0.99
NEDD1-208ENST00000555806 LAMC2Q13753 1193 aa21.22■□□□□ 0.99
NEDD1-208ENST00000555806 RTN1Q16799 776 aa21.22■□□□□ 0.99
NEDD1-208ENST00000555806 KCNV1Q6PIU1 500 aa21.22■□□□□ 0.99
NEDD1-208ENST00000555806 USP17L6PQ6QN14 398 aa21.22■□□□□ 0.99
NEDD1-208ENST00000555806 DHX37Q8IY37 1157 aaKnown RBP21.22■□□□□ 0.99
NEDD1-208ENST00000555806 SCN10AQ9Y5Y9 1956 aa21.22■□□□□ 0.99
NEDD1-208ENST00000555806 KLF18A0A0U1RQI7 1052 aa21.21■□□□□ 0.99
NEDD1-208ENST00000555806 SUPT20HL2P0C7V6 817 aa21.21■□□□□ 0.99
NEDD1-208ENST00000555806 CASTP20810 708 aaKnown RBP21.21■□□□□ 0.99
NEDD1-208ENST00000555806 HSPA4P34932 840 aa21.21■□□□□ 0.99
NEDD1-208ENST00000555806 DGKDQ16760 1214 aa21.21■□□□□ 0.99
NEDD1-208ENST00000555806 EMID1Q96A84 441 aaPredicted RBP21.21■□□□□ 0.99
NEDD1-208ENST00000555806 JAKMIP1Q96N16 626 aaKnown RBP21.21■□□□□ 0.99
NEDD1-208ENST00000555806 NOC4LQ9BVI4 516 aaKnown RBP21.21■□□□□ 0.99
NEDD1-208ENST00000555806 BRPF3Q9ULD4 1205 aa21.21■□□□□ 0.99
NEDD1-208ENST00000555806 FRMPD4Q14CM0 1322 aa21.21■□□□□ 0.99
NEDD1-208ENST00000555806 UMODL1Q5DID0 1318 aa21.21■□□□□ 0.99
NEDD1-208ENST00000555806 GOLGA8AA7E2F4 631 aa21.2■□□□□ 0.98
NEDD1-208ENST00000555806 GOLGA8BA8MQT2 603 aa21.2■□□□□ 0.98
NEDD1-208ENST00000555806 GGPS1O95749 300 aa21.2■□□□□ 0.98
NEDD1-208ENST00000555806 ACRP10323 421 aa21.2■□□□□ 0.98
NEDD1-208ENST00000555806 CYP2C9P11712 490 aa21.2■□□□□ 0.98
NEDD1-208ENST00000555806 CPA1P15085 419 aa21.2■□□□□ 0.98
NEDD1-208ENST00000555806 CCL23P55773 120 aa21.2■□□□□ 0.98
NEDD1-208ENST00000555806 GNPTABQ3T906 1256 aa21.2■□□□□ 0.98
NEDD1-208ENST00000555806 NFRKBQ6P4R8 1299 aa21.2■□□□□ 0.98
NEDD1-208ENST00000555806 HEATR3Q7Z4Q2 680 aa21.2■□□□□ 0.98
NEDD1-208ENST00000555806 KCNB2Q92953 911 aa21.2■□□□□ 0.98
NEDD1-208ENST00000555806 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.2■□□□□ 0.98
NEDD1-208ENST00000555806 PSTPIP2Q9H939 334 aa21.2■□□□□ 0.98
NEDD1-208ENST00000555806 PPP4R2Q9NY27 417 aa21.2■□□□□ 0.98
NEDD1-208ENST00000555806 SNX14Q9Y5W7 946 aa21.2■□□□□ 0.98
NEDD1-208ENST00000555806 CNTNAP5Q8WYK1 1306 aa21.2■□□□□ 0.98
NEDD1-208ENST00000555806 PIK3CDO00329 1044 aa21.19■□□□□ 0.98
NEDD1-208ENST00000555806 MEIS2O14770 477 aa21.19■□□□□ 0.98
NEDD1-208ENST00000555806 UBA1P22314 1058 aaKnown RBP21.19■□□□□ 0.98
NEDD1-208ENST00000555806 PTPN11Q06124 597 aaPredicted RBP21.19■□□□□ 0.98
NEDD1-208ENST00000555806 PSRC1Q6PGN9 363 aaPredicted RBP21.19■□□□□ 0.98
NEDD1-208ENST00000555806 BLOC1S2Q6QNY1 142 aa21.19■□□□□ 0.98
NEDD1-208ENST00000555806 PPTC7Q8NI37 304 aa21.19■□□□□ 0.98
NEDD1-208ENST00000555806 GPKOWQ92917 476 aaPredicted RBP eCLIP21.19■□□□□ 0.98
NEDD1-208ENST00000555806 SPATA33Q96N06 139 aa21.19■□□□□ 0.98
NEDD1-208ENST00000555806 NOD1Q9Y239 953 aa21.19■□□□□ 0.98
NEDD1-208ENST00000555806 STAM2O75886 525 aa21.18■□□□□ 0.98
NEDD1-208ENST00000555806 TGFB3P10600 412 aa21.18■□□□□ 0.98
NEDD1-208ENST00000555806 MRPS9P82933 396 aaKnown RBP21.18■□□□□ 0.98
NEDD1-208ENST00000555806 TMEM240Q5SV17 173 aa21.18■□□□□ 0.98
NEDD1-208ENST00000555806 CELF3Q5SZQ8 465 aaKnown RBP21.18■□□□□ 0.98
NEDD1-208ENST00000555806 ZNF697Q5TEC3 545 aa21.18■□□□□ 0.98
NEDD1-208ENST00000555806 MLXIPQ9HAP2 919 aa21.18■□□□□ 0.98
NEDD1-208ENST00000555806 IL23AQ9NPF7 189 aa21.18■□□□□ 0.98
NEDD1-208ENST00000555806 RTEL1Q9NZ71 1219 aa21.18■□□□□ 0.98
NEDD1-208ENST00000555806 MYH7BA7E2Y1 1941 aa21.17■□□□□ 0.98
NEDD1-208ENST00000555806 ZNF286BP0CG31 522 aa21.17■□□□□ 0.98
NEDD1-208ENST00000555806 SMAD3P84022 425 aaKnown RBP21.17■□□□□ 0.98
NEDD1-208ENST00000555806 SP2Q02086 613 aa21.17■□□□□ 0.98
NEDD1-208ENST00000555806 MYSM1Q5VVJ2 828 aa21.17■□□□□ 0.98
NEDD1-208ENST00000555806 Q6ZUG5 572 aa21.17■□□□□ 0.98
NEDD1-208ENST00000555806 ZNF365Q70YC5 407 aa21.17■□□□□ 0.98
NEDD1-208ENST00000555806 C16orf59Q7L2K0 433 aa21.17■□□□□ 0.98
NEDD1-208ENST00000555806 KAT2BQ92831 832 aa21.17■□□□□ 0.98
NEDD1-208ENST00000555806 KATNAL1Q9BW62 490 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms