RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 CYP3A7P24462 503 aa27.13■■□□□ 1.93
TMEM260-207ENST00000555497 BTNL9Q6UXG8 535 aa27.13■■□□□ 1.93
TMEM260-207ENST00000555497 CDAN1Q8IWY9 1227 aa27.13■■□□□ 1.93
TMEM260-207ENST00000555497 ACER1Q8TDN7 264 aa27.13■■□□□ 1.93
TMEM260-207ENST00000555497 MAGEC2Q9UBF1 373 aaPredicted RBP27.13■■□□□ 1.93
TMEM260-207ENST00000555497 HERC5Q9UII4 1024 aaKnown RBP27.13■■□□□ 1.93
TMEM260-207ENST00000555497 GOLGA6L9A6NEM1 432 aa27.13■■□□□ 1.93
TMEM260-207ENST00000555497 DLGAP5Q15398 846 aa27.13■■□□□ 1.93
TMEM260-207ENST00000555497 ARID3AQ99856 593 aa27.13■■□□□ 1.93
TMEM260-207ENST00000555497 TUBGCP2Q9BSJ2 902 aa27.13■■□□□ 1.93
TMEM260-207ENST00000555497 TMOD2Q9NZR1 351 aa27.13■■□□□ 1.93
TMEM260-207ENST00000555497 B4DLN1 442 aa27.12■■□□□ 1.93
TMEM260-207ENST00000555497 TPM1P09493 284 aa27.12■■□□□ 1.93
TMEM260-207ENST00000555497 CCDC175P0C221 793 aa27.12■■□□□ 1.93
TMEM260-207ENST00000555497 CENPPQ6IPU0 288 aa27.12■■□□□ 1.93
TMEM260-207ENST00000555497 DEFB132Q7Z7B7 95 aa27.12■■□□□ 1.93
TMEM260-207ENST00000555497 NAP1L4Q99733 375 aaKnown RBP27.12■■□□□ 1.93
TMEM260-207ENST00000555497 PES1O00541 588 aaKnown RBP27.12■■□□□ 1.93
TMEM260-207ENST00000555497 KRT9P35527 623 aa27.12■■□□□ 1.93
TMEM260-207ENST00000555497 GNG11P61952 73 aa27.12■■□□□ 1.93
TMEM260-207ENST00000555497 ARHGAP4P98171 946 aa27.12■■□□□ 1.93
TMEM260-207ENST00000555497 EHHADHQ08426 723 aa27.12■■□□□ 1.93
TMEM260-207ENST00000555497 TRIM14Q14142 442 aa27.12■■□□□ 1.93
TMEM260-207ENST00000555497 HYIQ5T013 277 aa27.12■■□□□ 1.93
TMEM260-207ENST00000555497 PDCL2Q8N4E4 241 aa27.12■■□□□ 1.93
TMEM260-207ENST00000555497 GLIS3Q8NEA6 775 aa27.12■■□□□ 1.93
TMEM260-207ENST00000555497 FAM151AQ8WW52 585 aa27.12■■□□□ 1.93
TMEM260-207ENST00000555497 CNOT6LQ96LI5 555 aaKnown RBP27.12■■□□□ 1.93
TMEM260-207ENST00000555497 GTPBP4Q9BZE4 634 aaKnown RBP27.12■■□□□ 1.93
TMEM260-207ENST00000555497 TTC26A0AVF1 554 aa27.11■■□□□ 1.93
TMEM260-207ENST00000555497 IDEP14735 1019 aa27.11■■□□□ 1.93
TMEM260-207ENST00000555497 STAT3P40763 770 aa27.11■■□□□ 1.93
TMEM260-207ENST00000555497 AP3B2Q13367 1082 aa27.11■■□□□ 1.93
TMEM260-207ENST00000555497 DNAJC19Q96DA6 116 aa27.11■■□□□ 1.93
TMEM260-207ENST00000555497 IRX2Q9BZI1 471 aaPredicted RBP27.11■■□□□ 1.93
TMEM260-207ENST00000555497 PRR12Q9ULL5 1215 aa27.11■■□□□ 1.93
TMEM260-207ENST00000555497 A0A1W2PQC6 194 aa27.1■■□□□ 1.93
TMEM260-207ENST00000555497 PPP1R2P41236 205 aa27.1■■□□□ 1.93
TMEM260-207ENST00000555497 MMP14P50281 582 aa27.1■■□□□ 1.93
TMEM260-207ENST00000555497 GRIPAP1Q4V328 841 aa27.1■■□□□ 1.93
TMEM260-207ENST00000555497 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.1■■□□□ 1.93
TMEM260-207ENST00000555497 SPDYE2Q495Y8 402 aa27.1■■□□□ 1.93
TMEM260-207ENST00000555497 MIIPQ5JXC2 388 aa27.09■■□□□ 1.93
TMEM260-207ENST00000555497 RASSF10A6NK89 507 aa27.09■■□□□ 1.93
TMEM260-207ENST00000555497 E9PMD0 336 aa27.09■■□□□ 1.93
TMEM260-207ENST00000555497 URI1O94763 535 aaPredicted RBP27.09■■□□□ 1.93
TMEM260-207ENST00000555497 HOXA13P31271 388 aaPredicted RBP27.09■■□□□ 1.93
TMEM260-207ENST00000555497 TMTC1Q8IUR5 882 aa27.09■■□□□ 1.93
TMEM260-207ENST00000555497 ETNPPLQ8TBG4 499 aa27.09■■□□□ 1.93
TMEM260-207ENST00000555497 KIFC2Q96AC6 838 aa27.09■■□□□ 1.93
TMEM260-207ENST00000555497 LZTFL1Q9NQ48 299 aa27.09■■□□□ 1.93
TMEM260-207ENST00000555497 HDAC9Q9UKV0 1011 aa27.09■■□□□ 1.93
TMEM260-207ENST00000555497 KIAA1024Q9UPX6 916 aa27.09■■□□□ 1.93
TMEM260-207ENST00000555497 POTEB3A0JP26 581 aa27.08■■□□□ 1.93
TMEM260-207ENST00000555497 POTECB2RU33 542 aa27.08■■□□□ 1.93
TMEM260-207ENST00000555497 DNM2P50570 870 aa27.08■■□□□ 1.93
TMEM260-207ENST00000555497 LRRC41Q15345 812 aa27.08■■□□□ 1.93
TMEM260-207ENST00000555497 PRR16Q569H4 304 aa27.08■■□□□ 1.93
TMEM260-207ENST00000555497 POTEBQ6S5H4 581 aa27.08■■□□□ 1.93
TMEM260-207ENST00000555497 MOXD1Q6UVY6 613 aa27.08■■□□□ 1.93
TMEM260-207ENST00000555497 OGFOD1Q8N543 542 aa27.08■■□□□ 1.93
TMEM260-207ENST00000555497 ACRBPQ8NEB7 543 aa27.08■■□□□ 1.93
TMEM260-207ENST00000555497 LENG9Q96B70 501 aa27.08■■□□□ 1.93
TMEM260-207ENST00000555497 KLK7P49862 253 aa27.08■■□□□ 1.92
TMEM260-207ENST00000555497 SPIRE1Q08AE8 756 aa27.08■■□□□ 1.92
TMEM260-207ENST00000555497 ELF2Q15723 593 aa27.08■■□□□ 1.92
TMEM260-207ENST00000555497 GUF1Q8N442 669 aaKnown RBP27.08■■□□□ 1.92
TMEM260-207ENST00000555497 CHP1Q99653 195 aa27.08■■□□□ 1.92
TMEM260-207ENST00000555497 TMEM39BQ9GZU3 492 aa27.08■■□□□ 1.92
TMEM260-207ENST00000555497 VEZTQ9HBM0 779 aa27.08■■□□□ 1.92
TMEM260-207ENST00000555497 TMX2Q9Y320 296 aa27.08■■□□□ 1.92
TMEM260-207ENST00000555497 FAM86B1E9PN63 330 aa27.07■■□□□ 1.92
TMEM260-207ENST00000555497 FAM86B2P0C5J1 330 aa27.07■■□□□ 1.92
TMEM260-207ENST00000555497 ZBTB21Q9ULJ3 1066 aa27.07■■□□□ 1.92
TMEM260-207ENST00000555497 MED24O75448 989 aa27.06■■□□□ 1.92
TMEM260-207ENST00000555497 CASQ1P31415 396 aa27.06■■□□□ 1.92
TMEM260-207ENST00000555497 SREBF1P36956 1147 aa27.06■■□□□ 1.92
TMEM260-207ENST00000555497 MTIF2P46199 727 aaKnown RBP27.06■■□□□ 1.92
TMEM260-207ENST00000555497 CYP26C1Q6V0L0 522 aa27.06■■□□□ 1.92
TMEM260-207ENST00000555497 LRRC27Q9C0I9 530 aa27.06■■□□□ 1.92
TMEM260-207ENST00000555497 ARHGEF10LQ9HCE6 1279 aa27.06■■□□□ 1.92
TMEM260-207ENST00000555497 SYNPO2Q9UMS6 1093 aa27.06■■□□□ 1.92
TMEM260-207ENST00000555497 SSBP05455 408 aaKnown RBP eCLIP27.06■■□□□ 1.92
TMEM260-207ENST00000555497 COASYQ13057 564 aa27.06■■□□□ 1.92
TMEM260-207ENST00000555497 FAM83BQ5T0W9 1011 aa27.06■■□□□ 1.92
TMEM260-207ENST00000555497 MIGA2Q7L4E1 593 aa27.06■■□□□ 1.92
TMEM260-207ENST00000555497 FAM114A1Q8IWE2 563 aa27.06■■□□□ 1.92
TMEM260-207ENST00000555497 NT5C3AQ9H0P0 336 aa27.06■■□□□ 1.92
TMEM260-207ENST00000555497 CAPN11Q9UMQ6 739 aa27.06■■□□□ 1.92
TMEM260-207ENST00000555497 KDM3AQ9Y4C1 1321 aa27.06■■□□□ 1.92
TMEM260-207ENST00000555497 ABL1P00519 1130 aa27.05■■□□□ 1.92
TMEM260-207ENST00000555497 TBC1D8BQ0IIM8 1120 aa27.05■■□□□ 1.92
TMEM260-207ENST00000555497 NPHP3-ACAD11A0A0J9YXS1 232 aa27.05■■□□□ 1.92
TMEM260-207ENST00000555497 SPDYE3A6NKU9 549 aa27.05■■□□□ 1.92
TMEM260-207ENST00000555497 STAT2P52630 851 aa27.05■■□□□ 1.92
TMEM260-207ENST00000555497 Q4G0T1 1027 aa27.05■■□□□ 1.92
TMEM260-207ENST00000555497 SLFN12Q8IYM2 578 aa27.05■■□□□ 1.92
TMEM260-207ENST00000555497 DNAJC7Q99615 494 aa27.05■■□□□ 1.92
TMEM260-207ENST00000555497 NOC4LQ9BVI4 516 aaKnown RBP27.05■■□□□ 1.92
TMEM260-207ENST00000555497 TTYH3Q9C0H2 523 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms