RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 PNMA5Q96PV4 448 aa16.26■□□□□ 0.19
IFT43-209ENST00000555305 PLIN2Q99541 437 aa16.26■□□□□ 0.19
IFT43-209ENST00000555305 BLOC1S4Q9NUP1 217 aa16.26■□□□□ 0.19
IFT43-209ENST00000555305 CCPG1Q9ULG6 757 aa16.26■□□□□ 0.19
IFT43-209ENST00000555305 LRRC10BA6NIK2 292 aa16.25■□□□□ 0.19
IFT43-209ENST00000555305 PRCPP42785 496 aa16.25■□□□□ 0.19
IFT43-209ENST00000555305 BACE1P56817 501 aa16.25■□□□□ 0.19
IFT43-209ENST00000555305 PDE4DQ08499 809 aa16.25■□□□□ 0.19
IFT43-209ENST00000555305 NOL9Q5SY16 702 aaKnown RBP16.25■□□□□ 0.19
IFT43-209ENST00000555305 SPECC1LQ69YQ0 1117 aa16.25■□□□□ 0.19
IFT43-209ENST00000555305 FOXR2Q6PJQ5 311 aa16.25■□□□□ 0.19
IFT43-209ENST00000555305 ZNF280CQ8ND82 737 aa16.25■□□□□ 0.19
IFT43-209ENST00000555305 C12orf42Q96LP6 360 aa16.25■□□□□ 0.19
IFT43-209ENST00000555305 GLIS2Q9BZE0 524 aaPredicted RBP16.25■□□□□ 0.19
IFT43-209ENST00000555305 TANGO6Q9C0B7 1094 aa16.25■□□□□ 0.19
IFT43-209ENST00000555305 ATAD5Q96QE3 1844 aa16.24■□□□□ 0.19
IFT43-209ENST00000555305 ZBED4O75132 1171 aa16.24■□□□□ 0.19
IFT43-209ENST00000555305 MUTP22033 750 aa16.24■□□□□ 0.19
IFT43-209ENST00000555305 EEF1GP26641 437 aaKnown RBP16.24■□□□□ 0.19
IFT43-209ENST00000555305 HOXA13P31271 388 aaPredicted RBP16.24■□□□□ 0.19
IFT43-209ENST00000555305 HSD17B4P51659 736 aa16.24■□□□□ 0.19
IFT43-209ENST00000555305 OAZ1P54368 228 aa16.24■□□□□ 0.19
IFT43-209ENST00000555305 FAM114A1Q8IWE2 563 aa16.24■□□□□ 0.19
IFT43-209ENST00000555305 SMYD4Q8IYR2 804 aaPredicted RBP16.24■□□□□ 0.19
IFT43-209ENST00000555305 LENG9Q96B70 501 aa16.24■□□□□ 0.19
IFT43-209ENST00000555305 MED15Q96RN5 788 aa16.24■□□□□ 0.19
IFT43-209ENST00000555305 WRNIP1Q96S55 665 aa16.24■□□□□ 0.19
IFT43-209ENST00000555305 THAP9Q9H5L6 903 aa16.24■□□□□ 0.19
IFT43-209ENST00000555305 SLC38A10Q9HBR0 1119 aa16.24■□□□□ 0.19
IFT43-209ENST00000555305 SAMSN1Q9NSI8 373 aaKnown RBP16.24■□□□□ 0.19
IFT43-209ENST00000555305 PPP1R9AQ9ULJ8 1098 aa16.24■□□□□ 0.19
IFT43-209ENST00000555305 KIF20AO95235 890 aa16.23■□□□□ 0.19
IFT43-209ENST00000555305 FGFR1OPO95684 399 aaKnown RBP16.23■□□□□ 0.19
IFT43-209ENST00000555305 SKILP12757 684 aa16.23■□□□□ 0.19
IFT43-209ENST00000555305 PTPRAP18433 802 aa16.23■□□□□ 0.19
IFT43-209ENST00000555305 VCAM1P19320 739 aa16.23■□□□□ 0.19
IFT43-209ENST00000555305 RPA1P27694 616 aa16.23■□□□□ 0.19
IFT43-209ENST00000555305 MTMR2Q13614 643 aa16.23■□□□□ 0.19
IFT43-209ENST00000555305 NR1I3Q14994 352 aa16.23■□□□□ 0.19
IFT43-209ENST00000555305 FCHSD1Q86WN1 690 aa16.23■□□□□ 0.19
IFT43-209ENST00000555305 ADARB2Q9NS39 739 aaKnown RBP16.23■□□□□ 0.19
IFT43-209ENST00000555305 KCND1Q9NSA2 647 aa16.23■□□□□ 0.19
IFT43-209ENST00000555305 GGA3Q9NZ52 723 aa16.23■□□□□ 0.19
IFT43-209ENST00000555305 LIMA1Q9UHB6 759 aaKnown RBP16.23■□□□□ 0.19
IFT43-209ENST00000555305 MYH7BA7E2Y1 1941 aa16.23■□□□□ 0.19
IFT43-209ENST00000555305 DICER1Q9UPY3 1922 aaKnown RBP16.23■□□□□ 0.19
IFT43-209ENST00000555305 FAM86B1E9PN63 330 aa16.23■□□□□ 0.19
IFT43-209ENST00000555305 CCP110O43303 1012 aa16.23■□□□□ 0.19
IFT43-209ENST00000555305 FLOT1O75955 427 aa16.23■□□□□ 0.19
IFT43-209ENST00000555305 TPM2P07951 284 aa16.23■□□□□ 0.19
IFT43-209ENST00000555305 FAM86B2P0C5J1 330 aa16.23■□□□□ 0.19
IFT43-209ENST00000555305 INPP5BP32019 993 aa16.23■□□□□ 0.19
IFT43-209ENST00000555305 TERF1P54274 439 aa16.23■□□□□ 0.19
IFT43-209ENST00000555305 NIPA1Q7RTP0 329 aa16.23■□□□□ 0.19
IFT43-209ENST00000555305 RBM46Q8TBY0 533 aaKnown RBP16.23■□□□□ 0.19
IFT43-209ENST00000555305 NAP1L5Q96NT1 182 aaPredicted RBP16.23■□□□□ 0.19
IFT43-209ENST00000555305 WDR11Q9BZH6 1224 aa16.23■□□□□ 0.19
IFT43-209ENST00000555305 FHDC1Q9C0D6 1143 aaPredicted RBP16.23■□□□□ 0.19
IFT43-209ENST00000555305 FBXO28Q9NVF7 368 aa16.23■□□□□ 0.19
IFT43-209ENST00000555305 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.23■□□□□ 0.19
IFT43-209ENST00000555305 MAGEC2Q9UBF1 373 aaPredicted RBP16.23■□□□□ 0.19
IFT43-209ENST00000555305 GDAQ9Y2T3 454 aa16.23■□□□□ 0.19
IFT43-209ENST00000555305 DOCK1Q14185 1865 aa16.23■□□□□ 0.19
IFT43-209ENST00000555305 ASTN2O75129 1339 aaPredicted RBP16.22■□□□□ 0.19
IFT43-209ENST00000555305 MSH4O15457 936 aa16.22■□□□□ 0.19
IFT43-209ENST00000555305 CCNE1P24864 410 aa16.22■□□□□ 0.19
IFT43-209ENST00000555305 STX17P56962 302 aa16.22■□□□□ 0.19
IFT43-209ENST00000555305 SPIRE1Q08AE8 756 aa16.22■□□□□ 0.19
IFT43-209ENST00000555305 MCM6Q14566 821 aa16.22■□□□□ 0.19
IFT43-209ENST00000555305 CEP55Q53EZ4 464 aa16.22■□□□□ 0.19
IFT43-209ENST00000555305 TRPM4Q8TD43 1214 aa16.22■□□□□ 0.19
IFT43-209ENST00000555305 KLRG1Q96E93 195 aa16.22■□□□□ 0.19
IFT43-209ENST00000555305 P2RX7Q99572 595 aaKnown RBP16.22■□□□□ 0.19
IFT43-209ENST00000555305 POLR3CQ9BUI4 534 aaPredicted RBP16.22■□□□□ 0.19
IFT43-209ENST00000555305 ADD3Q9UEY8 706 aaKnown RBP16.22■□□□□ 0.19
IFT43-209ENST00000555305 PYCARDQ9ULZ3 195 aa16.22■□□□□ 0.19
IFT43-209ENST00000555305 DNM3Q9UQ16 869 aa16.22■□□□□ 0.19
IFT43-209ENST00000555305 ZNF536O15090 1300 aa16.22■□□□□ 0.19
IFT43-209ENST00000555305 IGLV3-22A0A075B6J6 115 aa16.21■□□□□ 0.19
IFT43-209ENST00000555305 TPM1P09493 284 aa16.21■□□□□ 0.19
IFT43-209ENST00000555305 BCRP11274 1271 aa16.21■□□□□ 0.19
IFT43-209ENST00000555305 SPP2Q13103 211 aa16.21■□□□□ 0.19
IFT43-209ENST00000555305 CCDC65Q8IXS2 484 aa16.21■□□□□ 0.19
IFT43-209ENST00000555305 LRRC15Q8TF66 581 aa16.21■□□□□ 0.19
IFT43-209ENST00000555305 DDX12PQ92771 950 aa16.21■□□□□ 0.19
IFT43-209ENST00000555305 P2RX5Q93086 422 aa16.21■□□□□ 0.19
IFT43-209ENST00000555305 RPAP3Q9H6T3 665 aaPredicted RBP16.21■□□□□ 0.19
IFT43-209ENST00000555305 EMILIN3Q9NT22 766 aa16.21■□□□□ 0.19
IFT43-209ENST00000555305 TMOD4Q9NZQ9 345 aa16.21■□□□□ 0.19
IFT43-209ENST00000555305 ITIH6Q6UXX5 1313 aa16.21■□□□□ 0.19
IFT43-209ENST00000555305 MYPNQ86TC9 1320 aa16.21■□□□□ 0.19
IFT43-209ENST00000555305 MYMKA6NI61 221 aa16.21■□□□□ 0.18
IFT43-209ENST00000555305 LRMPQ12912 555 aa16.21■□□□□ 0.18
IFT43-209ENST00000555305 PPP2R5CQ13362 524 aa16.21■□□□□ 0.18
IFT43-209ENST00000555305 TRIM14Q14142 442 aa16.21■□□□□ 0.18
IFT43-209ENST00000555305 TCP11X2Q5H9J9 407 aa16.21■□□□□ 0.18
IFT43-209ENST00000555305 DNTTIP2Q5QJE6 756 aaKnown RBP16.21■□□□□ 0.18
IFT43-209ENST00000555305 GUF1Q8N442 669 aaKnown RBP16.21■□□□□ 0.18
IFT43-209ENST00000555305 DCPSQ96C86 337 aaKnown RBP16.21■□□□□ 0.18
IFT43-209ENST00000555305 TRIM47Q96LD4 638 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms