RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 ADSSL1Q8N142 457 aa10.01□□□□□ -0.81
TDP1-210ENST00000554976 ZNF280CQ8ND82 737 aa10.01□□□□□ -0.81
TDP1-210ENST00000554976 WRNIP1Q96S55 665 aa10.01□□□□□ -0.81
TDP1-210ENST00000554976 RWDD2AQ9UIY3 292 aa10.01□□□□□ -0.81
TDP1-210ENST00000554976 SPATA31C1P0DKV0 1188 aa10.01□□□□□ -0.81
TDP1-210ENST00000554976 USP14P54578 494 aa10.01□□□□□ -0.81
TDP1-210ENST00000554976 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.01□□□□□ -0.81
TDP1-210ENST00000554976 TRMT44Q8IYL2 757 aaKnown RBP10.01□□□□□ -0.81
TDP1-210ENST00000554976 SLFN12Q8IYM2 578 aa10.01□□□□□ -0.81
TDP1-210ENST00000554976 SAMD3Q8N6K7 520 aa10.01□□□□□ -0.81
TDP1-210ENST00000554976 CYP2W1Q8TAV3 490 aa10.01□□□□□ -0.81
TDP1-210ENST00000554976 SLC5A5Q92911 643 aa10.01□□□□□ -0.81
TDP1-210ENST00000554976 RPAP3Q9H6T3 665 aaPredicted RBP10.01□□□□□ -0.81
TDP1-210ENST00000554976 MRPL11Q9Y3B7 192 aaKnown RBP10.01□□□□□ -0.81
TDP1-210ENST00000554976 MYMKA6NI61 221 aa10.01□□□□□ -0.81
TDP1-210ENST00000554976 ATP2A1O14983 1001 aa10.01□□□□□ -0.81
TDP1-210ENST00000554976 PTGS1P23219 599 aa10.01□□□□□ -0.81
TDP1-210ENST00000554976 PBX1P40424 430 aa10.01□□□□□ -0.81
TDP1-210ENST00000554976 TBX2Q13207 712 aaPredicted RBP10.01□□□□□ -0.81
TDP1-210ENST00000554976 TMEM266Q2M3C6 531 aa10.01□□□□□ -0.81
TDP1-210ENST00000554976 MUM1L1Q5H9M0 696 aa10.01□□□□□ -0.81
TDP1-210ENST00000554976 SPATA1Q5VX52 437 aa10.01□□□□□ -0.81
TDP1-210ENST00000554976 DLK2Q6UY11 383 aa10.01□□□□□ -0.81
TDP1-210ENST00000554976 DNAJC19Q96DA6 116 aa10.01□□□□□ -0.81
TDP1-210ENST00000554976 ZNF830Q96NB3 372 aaPredicted RBP10.01□□□□□ -0.81
TDP1-210ENST00000554976 PLIN2Q99541 437 aa10.01□□□□□ -0.81
TDP1-210ENST00000554976 RMND1Q9NWS8 449 aa10.01□□□□□ -0.81
TDP1-210ENST00000554976 MAP3K20Q9NYL2 800 aaKnown RBP10.01□□□□□ -0.81
TDP1-210ENST00000554976 RNF181Q9P0P0 153 aa10.01□□□□□ -0.81
TDP1-210ENST00000554976 IFNKQ9P0W0 207 aa10.01□□□□□ -0.81
TDP1-210ENST00000554976 GDAQ9Y2T3 454 aa10.01□□□□□ -0.81
TDP1-210ENST00000554976 SYNRGQ9UMZ2 1314 aa10.01□□□□□ -0.81
TDP1-210ENST00000554976 SIP14410 1827 aa10□□□□□ -0.81
TDP1-210ENST00000554976 FRMD3A2A2Y4 597 aa10□□□□□ -0.81
TDP1-210ENST00000554976 POTECB2RU33 542 aa10□□□□□ -0.81
TDP1-210ENST00000554976 GCOM1H8Y6P7 765 aaPredicted RBP10□□□□□ -0.81
TDP1-210ENST00000554976 VWA5AO00534 786 aa10□□□□□ -0.81
TDP1-210ENST00000554976 NFIBO00712 420 aa10□□□□□ -0.81
TDP1-210ENST00000554976 MED24O75448 989 aa10□□□□□ -0.81
TDP1-210ENST00000554976 PSMD10O75832 226 aa10□□□□□ -0.81
TDP1-210ENST00000554976 TPM3P06753 285 aa10□□□□□ -0.81
TDP1-210ENST00000554976 POLR2MP0CAP2 368 aa10□□□□□ -0.81
TDP1-210ENST00000554976 LMOD1P29536 600 aaPredicted RBP10□□□□□ -0.81
TDP1-210ENST00000554976 PRCPP42785 496 aa10□□□□□ -0.81
TDP1-210ENST00000554976 IKQ13123 557 aaPredicted RBP10□□□□□ -0.81
TDP1-210ENST00000554976 SPC24Q8NBT2 197 aa10□□□□□ -0.81
TDP1-210ENST00000554976 FAM20AQ96MK3 541 aa10□□□□□ -0.81
TDP1-210ENST00000554976 SAMSN1Q9NSI8 373 aaKnown RBP10□□□□□ -0.81
TDP1-210ENST00000554976 IMPACTQ9P2X3 320 aa10□□□□□ -0.81
TDP1-210ENST00000554976 PCDHA2Q9Y5H9 948 aa10□□□□□ -0.81
TDP1-210ENST00000554976 SPDYE3A6NKU9 549 aa10□□□□□ -0.81
TDP1-210ENST00000554976 PMS1P54277 932 aaKnown RBP10□□□□□ -0.81
TDP1-210ENST00000554976 PPP2R5CQ13362 524 aa10□□□□□ -0.81
TDP1-210ENST00000554976 C9orf131Q5VYM1 1079 aa10□□□□□ -0.81
TDP1-210ENST00000554976 KIAA0895Q8NCT3 520 aa10□□□□□ -0.81
TDP1-210ENST00000554976 BBXQ8WY36 941 aaPredicted RBP10□□□□□ -0.81
TDP1-210ENST00000554976 LARP4BQ92615 738 aaKnown RBP10□□□□□ -0.81
TDP1-210ENST00000554976 CCDC34Q96HJ3 373 aa10□□□□□ -0.81
TDP1-210ENST00000554976 AS3MTQ9HBK9 375 aa10□□□□□ -0.81
TDP1-210ENST00000554976 SPTLC3Q9NUV7 552 aa10□□□□□ -0.81
TDP1-210ENST00000554976 PYCARDQ9ULZ3 195 aa10□□□□□ -0.81
TDP1-210ENST00000554976 PCDHA12Q9UN75 941 aa10□□□□□ -0.81
TDP1-210ENST00000554976 NFE2L3Q9Y4A8 694 aa10□□□□□ -0.81
TDP1-210ENST00000554976 ZC3H4Q9UPT8 1303 aaKnown RBP10□□□□□ -0.81
TDP1-210ENST00000554976 KDM3AQ9Y4C1 1321 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 A0A1B0GTH6 734 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 C19orf81C9J6K1 198 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 DSG3P32926 999 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 STAT3P40763 770 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 SLC12A3P55017 1021 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 CCZ1BP86790 482 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 CCZ1P86791 482 aaPredicted RBP9.99□□□□□ -0.81
TDP1-210ENST00000554976 NR1I3Q14994 352 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 ZRSR1Q15695 479 aaKnown RBP9.99□□□□□ -0.81
TDP1-210ENST00000554976 CATSPERGQ6ZRH7 1159 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 IRF2BP1Q8IU81 584 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 KIAA1524Q8TCG1 905 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 SNX29Q8TEQ0 813 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 CACTINQ8WUQ7 758 aaKnown RBP9.99□□□□□ -0.81
TDP1-210ENST00000554976 LRRC10BA6NIK2 292 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 ADM5C9JUS6 153 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 MEIS1O00470 390 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 OAZ1P54368 228 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 SPP2Q13103 211 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 MCM6Q14566 821 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 ARID5BQ14865 1188 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 PRR16Q569H4 304 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 CCDC186Q7Z3E2 898 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 VSTM4Q8IW00 320 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 CALML4Q96GE6 196 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 FEZ1Q99689 392 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 KCND1Q9NSA2 647 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 ZNF214Q9UL59 606 aaPredicted RBP9.99□□□□□ -0.81
TDP1-210ENST00000554976 CTNND2Q9UQB3 1225 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 MYPNQ86TC9 1320 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 FDX1P10109 184 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 BCRP11274 1271 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 MOGSQ13724 837 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 VGLL4Q14135 290 aa9.99□□□□□ -0.81
TDP1-210ENST00000554976 TTI2Q6NXR4 508 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms