RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 NIF3L1Q9GZT8 377 aa7.44□□□□□ -1.22
ATXN3-226ENST00000554350 DNAJC25Q9H1X3 360 aa7.44□□□□□ -1.22
ATXN3-226ENST00000554350 ZFYVE1Q9HBF4 777 aa7.44□□□□□ -1.22
ATXN3-226ENST00000554350 RRP7AQ9Y3A4 280 aaKnown RBP7.44□□□□□ -1.22
ATXN3-226ENST00000554350 SCN9AQ15858 1988 aa7.44□□□□□ -1.22
ATXN3-226ENST00000554350 CCL15-CCL14A0A0B4J2E2 113 aa7.43□□□□□ -1.22
ATXN3-226ENST00000554350 WNT10BO00744 389 aa7.43□□□□□ -1.22
ATXN3-226ENST00000554350 ZNF862O60290 1169 aa7.43□□□□□ -1.22
ATXN3-226ENST00000554350 LIG1P18858 919 aa7.43□□□□□ -1.22
ATXN3-226ENST00000554350 AP3B2Q13367 1082 aa7.43□□□□□ -1.22
ATXN3-226ENST00000554350 CCL15Q16663 113 aa7.43□□□□□ -1.22
ATXN3-226ENST00000554350 PARP10Q53GL7 1025 aa7.43□□□□□ -1.22
ATXN3-226ENST00000554350 DUSP27Q5VZP5 1158 aa7.43□□□□□ -1.22
ATXN3-226ENST00000554350 OGFOD3Q6PK18 319 aa7.43□□□□□ -1.22
ATXN3-226ENST00000554350 NECAB2Q7Z6G3 386 aa7.43□□□□□ -1.22
ATXN3-226ENST00000554350 LRRC4CQ9HCJ2 640 aa7.43□□□□□ -1.22
ATXN3-226ENST00000554350 CRIM1Q9NZV1 1036 aa7.43□□□□□ -1.22
ATXN3-226ENST00000554350 SRRDQ9UH36 339 aa7.43□□□□□ -1.22
ATXN3-226ENST00000554350 DAGLAQ9Y4D2 1042 aa7.43□□□□□ -1.22
ATXN3-226ENST00000554350 MYPNQ86TC9 1320 aa7.43□□□□□ -1.22
ATXN3-226ENST00000554350 UFL1O94874 794 aa7.42□□□□□ -1.22
ATXN3-226ENST00000554350 CENPBP07199 599 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-226ENST00000554350 PSMC4P43686 418 aa7.42□□□□□ -1.22
ATXN3-226ENST00000554350 CYP27A1Q02318 531 aa7.42□□□□□ -1.22
ATXN3-226ENST00000554350 PDE3AQ14432 1141 aa7.42□□□□□ -1.22
ATXN3-226ENST00000554350 TP53INP2Q8IXH6 220 aa7.42□□□□□ -1.22
ATXN3-226ENST00000554350 ZNF34Q8IZ26 560 aa7.42□□□□□ -1.22
ATXN3-226ENST00000554350 FLCNQ8NFG4 579 aa7.42□□□□□ -1.22
ATXN3-226ENST00000554350 TBC1D16Q8TBP0 767 aa7.42□□□□□ -1.22
ATXN3-226ENST00000554350 EPS8L3Q8TE67 593 aaKnown RBP7.42□□□□□ -1.22
ATXN3-226ENST00000554350 DIS3LQ8TF46 1054 aaKnown RBP7.42□□□□□ -1.22
ATXN3-226ENST00000554350 BRI3BPQ8WY22 251 aa7.42□□□□□ -1.22
ATXN3-226ENST00000554350 ZNF428Q96B54 188 aa7.42□□□□□ -1.22
ATXN3-226ENST00000554350 OPTNQ96CV9 577 aa7.42□□□□□ -1.22
ATXN3-226ENST00000554350 DEFB118Q96PH6 123 aa7.42□□□□□ -1.22
ATXN3-226ENST00000554350 C1QTNF1Q9BXJ1 281 aa7.42□□□□□ -1.22
ATXN3-226ENST00000554350 U3KQE9 123 aa7.42□□□□□ -1.22
ATXN3-226ENST00000554350 SIPA1L3O60292 1781 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-226ENST00000554350 ALPK3Q96L96 1907 aa7.41□□□□□ -1.22
ATXN3-226ENST00000554350 TLR2O60603 784 aa7.41□□□□□ -1.22
ATXN3-226ENST00000554350 SLC10A5Q5PT55 438 aa7.41□□□□□ -1.22
ATXN3-226ENST00000554350 FAM43AQ8N2R8 423 aa7.41□□□□□ -1.22
ATXN3-226ENST00000554350 BCL7CQ8WUZ0 217 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-226ENST00000554350 ALKBH8Q96BT7 664 aaKnown RBP7.41□□□□□ -1.22
ATXN3-226ENST00000554350 FANCD2OSQ96PS1 177 aa7.41□□□□□ -1.22
ATXN3-226ENST00000554350 UHRF1Q96T88 793 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-226ENST00000554350 GMLQ99445 158 aa7.41□□□□□ -1.22
ATXN3-226ENST00000554350 MXD3Q9BW11 206 aa7.41□□□□□ -1.22
ATXN3-226ENST00000554350 DEFB129Q9H1M3 183 aa7.41□□□□□ -1.22
ATXN3-226ENST00000554350 PIEZO1Q92508 2521 aa7.41□□□□□ -1.22
ATXN3-226ENST00000554350 GTF2A2P52657 109 aa7.4□□□□□ -1.22
ATXN3-226ENST00000554350 MAP3K11Q16584 847 aa7.4□□□□□ -1.22
ATXN3-226ENST00000554350 SUPT20HL1Q3ZLR7 823 aa7.4□□□□□ -1.22
ATXN3-226ENST00000554350 PI16Q6UXB8 463 aa7.4□□□□□ -1.22
ATXN3-226ENST00000554350 ZNF574Q6ZN55 896 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-226ENST00000554350 SPRED2Q7Z698 418 aa7.4□□□□□ -1.22
ATXN3-226ENST00000554350 PDZD3Q86UT5 571 aa7.4□□□□□ -1.22
ATXN3-226ENST00000554350 ANKRD13AQ8IZ07 590 aa7.4□□□□□ -1.22
ATXN3-226ENST00000554350 PPM1EQ8WY54 764 aa7.4□□□□□ -1.22
ATXN3-226ENST00000554350 CELF1Q92879 486 aaKnown RBP7.4□□□□□ -1.22
ATXN3-226ENST00000554350 RBCK1Q9BYM8 510 aa7.4□□□□□ -1.22
ATXN3-226ENST00000554350 DISC1Q9NRI5 854 aa7.4□□□□□ -1.22
ATXN3-226ENST00000554350 TRMT112Q9UI30 125 aaKnown RBP7.4□□□□□ -1.22
ATXN3-226ENST00000554350 CPA4Q9UI42 421 aa7.4□□□□□ -1.22
ATXN3-226ENST00000554350 LAMB2P55268 1798 aa7.4□□□□□ -1.23
ATXN3-226ENST00000554350 ANKRD36CQ5JPF3 1778 aa7.39□□□□□ -1.23
ATXN3-226ENST00000554350 LRRC37AA6NMS7 1700 aa7.39□□□□□ -1.23
ATXN3-226ENST00000554350 FAM205AQ6ZU69 1335 aa7.39□□□□□ -1.23
ATXN3-226ENST00000554350 GADD45BO75293 160 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-226ENST00000554350 PRKCZQ05513 592 aa7.39□□□□□ -1.23
ATXN3-226ENST00000554350 CDK5R2Q13319 367 aa7.39□□□□□ -1.23
ATXN3-226ENST00000554350 OGFOD2Q6N063 350 aa7.39□□□□□ -1.23
ATXN3-226ENST00000554350 STK35Q8TDR2 534 aa7.39□□□□□ -1.23
ATXN3-226ENST00000554350 EYSQ5T1H1 3165 aa7.38□□□□□ -1.23
ATXN3-226ENST00000554350 ARID1BQ8NFD5 2236 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-226ENST00000554350 SH3TC1Q8TE82 1336 aa7.38□□□□□ -1.23
ATXN3-226ENST00000554350 PRUNE2Q8WUY3 3088 aa7.38□□□□□ -1.23
ATXN3-226ENST00000554350 UNCXA6NJT0 531 aa7.38□□□□□ -1.23
ATXN3-226ENST00000554350 ADCY3O60266 1144 aa7.38□□□□□ -1.23
ATXN3-226ENST00000554350 GSTP1P09211 210 aaKnown RBP7.38□□□□□ -1.23
ATXN3-226ENST00000554350 CTGFP29279 349 aa7.38□□□□□ -1.23
ATXN3-226ENST00000554350 USP38Q8NB14 1042 aa7.38□□□□□ -1.23
ATXN3-226ENST00000554350 AGBL5Q8NDL9 886 aa7.38□□□□□ -1.23
ATXN3-226ENST00000554350 RTF1Q92541 710 aaKnown RBP7.38□□□□□ -1.23
ATXN3-226ENST00000554350 P2RX7Q99572 595 aaKnown RBP7.38□□□□□ -1.23
ATXN3-226ENST00000554350 LBHD1Q9BQE6 289 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-226ENST00000554350 VEZTQ9HBM0 779 aa7.38□□□□□ -1.23
ATXN3-226ENST00000554350 KRT82Q9NSB4 513 aa7.38□□□□□ -1.23
ATXN3-226ENST00000554350 LAMB1P07942 1786 aa7.38□□□□□ -1.23
ATXN3-226ENST00000554350 SSC5DA1L4H1 1573 aa7.37□□□□□ -1.23
ATXN3-226ENST00000554350 COL1A1P02452 1464 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-226ENST00000554350 U2SURPO15042 1029 aaKnown RBP7.37□□□□□ -1.23
ATXN3-226ENST00000554350 USP2O75604 605 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-226ENST00000554350 PAPLNO95428 1278 aa7.37□□□□□ -1.23
ATXN3-226ENST00000554350 CAPN2P17655 700 aa7.37□□□□□ -1.23
ATXN3-226ENST00000554350 MRE11P49959 708 aa7.37□□□□□ -1.23
ATXN3-226ENST00000554350 FCGRTP55899 365 aa7.37□□□□□ -1.23
ATXN3-226ENST00000554350 ID3Q02535 119 aa7.37□□□□□ -1.23
ATXN3-226ENST00000554350 NBPF12Q5TAG4 269 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-226ENST00000554350 MCM10Q7L590 875 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms