RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 Q6ZUG5 572 aa15.05■□□□□ -0
SHMT2-211ENST00000554310 VSIG10LQ86VR7 867 aa15.05■□□□□ -0
SHMT2-211ENST00000554310 FCHSD1Q86WN1 690 aa15.05■□□□□ -0
SHMT2-211ENST00000554310 TEX2Q8IWB9 1127 aa15.05■□□□□ -0
SHMT2-211ENST00000554310 ZNF713Q8N859 430 aaPredicted RBP15.05■□□□□ -0
SHMT2-211ENST00000554310 SMARCC2Q8TAQ2 1214 aa15.05■□□□□ -0
SHMT2-211ENST00000554310 BRF1Q92994 677 aa15.05■□□□□ -0
SHMT2-211ENST00000554310 IPO9Q96P70 1041 aaKnown RBP15.05■□□□□ -0
SHMT2-211ENST00000554310 USP26Q9BXU7 913 aa15.05■□□□□ -0
SHMT2-211ENST00000554310 AGXT2Q9BYV1 514 aa15.05■□□□□ -0
SHMT2-211ENST00000554310 UBE2OQ9C0C9 1292 aaKnown RBP15.05■□□□□ -0
SHMT2-211ENST00000554310 KPNA6O60684 536 aa15.04■□□□□ -0
SHMT2-211ENST00000554310 STAM2O75886 525 aa15.04■□□□□ -0
SHMT2-211ENST00000554310 MYCLP12524 364 aaPredicted RBP15.04■□□□□ -0
SHMT2-211ENST00000554310 METAP2P50579 478 aaKnown RBP eCLIP15.04■□□□□ -02e-6■■■■□ 21
SHMT2-211ENST00000554310 FXR1P51114 621 aaKnown RBP eCLIP15.04■□□□□ -0
SHMT2-211ENST00000554310 PURAQ00577 322 aaKnown RBP15.04■□□□□ -0
SHMT2-211ENST00000554310 MDM2Q00987 491 aaPredicted RBP15.04■□□□□ -0
SHMT2-211ENST00000554310 FUT2Q10981 343 aa15.04■□□□□ -0
SHMT2-211ENST00000554310 PPP1R18Q6NYC8 613 aa15.04■□□□□ -0
SHMT2-211ENST00000554310 KCNV1Q6PIU1 500 aa15.04■□□□□ -0
SHMT2-211ENST00000554310 HEATR3Q7Z4Q2 680 aa15.04■□□□□ -0
SHMT2-211ENST00000554310 FAM126BQ8IXS8 530 aa15.04■□□□□ -0
SHMT2-211ENST00000554310 CCDC82Q8N4S0 544 aa15.04■□□□□ -0
SHMT2-211ENST00000554310 SLC43A3Q8NBI5 491 aa15.04■□□□□ -0
SHMT2-211ENST00000554310 IL31RAQ8NI17 732 aa15.04■□□□□ -0
SHMT2-211ENST00000554310 COPS5Q92905 334 aa15.04■□□□□ -0
SHMT2-211ENST00000554310 NAP1L2Q9ULW6 460 aaPredicted RBP15.04■□□□□ -0
SHMT2-211ENST00000554310 MRVI1Q9Y6F6 885 aa15.04■□□□□ -0
SHMT2-211ENST00000554310 hCG_1642624A0A1W2PR95 340 aa15.03■□□□□ -0
SHMT2-211ENST00000554310 TRIM43BA6NCK2 446 aa15.03■□□□□ -0
SHMT2-211ENST00000554310 TLR3O15455 904 aaKnown RBP15.03■□□□□ -0
SHMT2-211ENST00000554310 EIF5BO60841 1220 aaKnown RBP15.03■□□□□ -0
SHMT2-211ENST00000554310 ARHGAP1Q07960 439 aa15.03■□□□□ -0
SHMT2-211ENST00000554310 APOBRQ0VD83 1088 aa15.03■□□□□ -0
SHMT2-211ENST00000554310 FAAP100Q0VG06 881 aa15.03■□□□□ -0
SHMT2-211ENST00000554310 ITGA7Q13683 1181 aa15.03■□□□□ -0
SHMT2-211ENST00000554310 GNPTABQ3T906 1256 aa15.03■□□□□ -0
SHMT2-211ENST00000554310 XRRA1Q6P2D8 792 aa15.03■□□□□ -0
SHMT2-211ENST00000554310 RUFY3Q7L099 469 aa15.03■□□□□ -0
SHMT2-211ENST00000554310 SH3RF1Q7Z6J0 888 aa15.03■□□□□ -0
SHMT2-211ENST00000554310 TDHQ8IZJ6 230 aa15.03■□□□□ -0
SHMT2-211ENST00000554310 GPKOWQ92917 476 aaPredicted RBP eCLIP15.03■□□□□ -0
SHMT2-211ENST00000554310 EMID1Q96A84 441 aaPredicted RBP15.03■□□□□ -0
SHMT2-211ENST00000554310 TRIM43Q96BQ3 446 aaPredicted RBP15.03■□□□□ -0
SHMT2-211ENST00000554310 MTG1Q9BT17 334 aaPredicted RBP15.03■□□□□ -0
SHMT2-211ENST00000554310 TM6SF1Q9BZW5 370 aa15.03■□□□□ -0
SHMT2-211ENST00000554310 PSTPIP2Q9H939 334 aa15.03■□□□□ -0
SHMT2-211ENST00000554310 TMEM39AQ9NV64 488 aa15.03■□□□□ -0
SHMT2-211ENST00000554310 DDX41Q9UJV9 622 aaKnown RBP15.03■□□□□ -0
SHMT2-211ENST00000554310 TBX21Q9UL17 535 aa15.03■□□□□ -0
SHMT2-211ENST00000554310 LAMA3Q16787 3333 aa15.02■□□□□ -0
SHMT2-211ENST00000554310 MEIS2O14770 477 aa15.02■□□□□ -0
SHMT2-211ENST00000554310 RGS20O76081 388 aa15.02■□□□□ -0
SHMT2-211ENST00000554310 MMP3P08254 477 aa15.02■□□□□ -0
SHMT2-211ENST00000554310 MYL3P08590 195 aa15.02■□□□□ -0
SHMT2-211ENST00000554310 CDC27P30260 824 aa15.02■□□□□ -0
SHMT2-211ENST00000554310 LY6KQ17RY6 165 aa15.02■□□□□ -0
SHMT2-211ENST00000554310 WWC2Q6AWC2 1192 aa15.02■□□□□ -0
SHMT2-211ENST00000554310 USP17L6PQ6QN14 398 aa15.02■□□□□ -0
SHMT2-211ENST00000554310 ZSWIM6Q9HCJ5 1215 aa15.02■□□□□ -0
SHMT2-211ENST00000554310 FAM217BQ9NTX9 383 aaPredicted RBP15.02■□□□□ -0
SHMT2-211ENST00000554310 CYP46A1Q9Y6A2 500 aa15.02■□□□□ -0
SHMT2-211ENST00000554310 GRIN2DO15399 1336 aa15.01□□□□□ -0.01
SHMT2-211ENST00000554310 TGFB3P10600 412 aa15.01□□□□□ -0.01
SHMT2-211ENST00000554310 RAG1P15918 1043 aa15.01□□□□□ -0.01
SHMT2-211ENST00000554310 EVCP57679 992 aa15.01□□□□□ -0.01
SHMT2-211ENST00000554310 PSMC6P62333 389 aa15.01□□□□□ -0.01
SHMT2-211ENST00000554310 LAMC2Q13753 1193 aa15.01□□□□□ -0.01
SHMT2-211ENST00000554310 PCNX4Q63HM2 1172 aa15.01□□□□□ -0.01
SHMT2-211ENST00000554310 PPTC7Q8NI37 304 aa15.01□□□□□ -0.01
SHMT2-211ENST00000554310 AFG1LQ8WV93 481 aa15.01□□□□□ -0.01
SHMT2-211ENST00000554310 BADQ92934 168 aa15.01□□□□□ -0.01
SHMT2-211ENST00000554310 INPP4AQ96PE3 977 aaPredicted RBP15.01□□□□□ -0.01
SHMT2-211ENST00000554310 MYH7BA7E2Y1 1941 aa15.01□□□□□ -0.01
SHMT2-211ENST00000554310 SPDYE3A6NKU9 549 aa15□□□□□ -0.01
SHMT2-211ENST00000554310 CD4P01730 458 aa15□□□□□ -0.01
SHMT2-211ENST00000554310 UBA1P22314 1058 aaKnown RBP15□□□□□ -0.01
SHMT2-211ENST00000554310 NAPAP54920 295 aa15□□□□□ -0.01
SHMT2-211ENST00000554310 ANAPC15P60006 121 aa15□□□□□ -0.01
SHMT2-211ENST00000554310 DHX37Q8IY37 1157 aaKnown RBP15□□□□□ -0.01
SHMT2-211ENST00000554310 GLT8D2Q9H1C3 349 aa15□□□□□ -0.01
SHMT2-211ENST00000554310 EHMT1Q9H9B1 1298 aa15□□□□□ -0.01
SHMT2-211ENST00000554310 BARHL2Q9NY43 387 aa15□□□□□ -0.01
SHMT2-211ENST00000554310 V9GY48 417 aaPredicted RBP15□□□□□ -0.01
SHMT2-211ENST00000554310 FIBPO43427 364 aa14.99□□□□□ -0.01
SHMT2-211ENST00000554310 TIMP1P01033 207 aa14.99□□□□□ -0.01
SHMT2-211ENST00000554310 HOXD8P13378 290 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-211ENST00000554310 ITGB8P26012 769 aa14.99□□□□□ -0.01
SHMT2-211ENST00000554310 ICAM3P32942 547 aa14.99□□□□□ -0.01
SHMT2-211ENST00000554310 ADD1P35611 737 aaKnown RBP14.99□□□□□ -0.01
SHMT2-211ENST00000554310 ADCY7P51828 1080 aa14.99□□□□□ -0.01
SHMT2-211ENST00000554310 MRPS9P82933 396 aaKnown RBP14.99□□□□□ -0.01
SHMT2-211ENST00000554310 FPGSQ05932 587 aa14.99□□□□□ -0.01
SHMT2-211ENST00000554310 DGKDQ16760 1214 aa14.99□□□□□ -0.01
SHMT2-211ENST00000554310 PFKFB3Q16875 520 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-211ENST00000554310 LRIT3Q3SXY7 679 aa14.99□□□□□ -0.01
SHMT2-211ENST00000554310 NFRKBQ6P4R8 1299 aa14.99□□□□□ -0.01
SHMT2-211ENST00000554310 UPF3BQ9BZI7 483 aaKnown RBP14.99□□□□□ -0.01
SHMT2-211ENST00000554310 ALDH8A1Q9H2A2 487 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms