RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 DDX41Q9UJV9 622 aaKnown RBP13.79□□□□□ -0.2
TRAPPC6B-204ENST00000554018 PNMA6FA0A0J9YX94 578 aa13.78□□□□□ -0.2
TRAPPC6B-204ENST00000554018 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC6B-204ENST00000554018 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC6B-204ENST00000554018 GRXCR1A8MXD5 290 aa13.78□□□□□ -0.2
TRAPPC6B-204ENST00000554018 GCOM1H8Y6P7 765 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC6B-204ENST00000554018 GH1P01241 217 aa13.78□□□□□ -0.2
TRAPPC6B-204ENST00000554018 POLR2MP0CAP2 368 aa13.78□□□□□ -0.2
TRAPPC6B-204ENST00000554018 MYCLP12524 364 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC6B-204ENST00000554018 MCM5P33992 734 aa13.78□□□□□ -0.2
TRAPPC6B-204ENST00000554018 BMP2KLQ5H9B9 411 aa13.78□□□□□ -0.2
TRAPPC6B-204ENST00000554018 RASIP1Q5U651 963 aa13.78□□□□□ -0.2
TRAPPC6B-204ENST00000554018 CREB3L3Q68CJ9 461 aa13.78□□□□□ -0.2
TRAPPC6B-204ENST00000554018 PSRC1Q6PGN9 363 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC6B-204ENST00000554018 CASC1Q6TDU7 716 aa13.78□□□□□ -0.2
TRAPPC6B-204ENST00000554018 ZNF654Q8IZM8 581 aa13.78□□□□□ -0.2
TRAPPC6B-204ENST00000554018 IL31RAQ8NI17 732 aa13.78□□□□□ -0.2
TRAPPC6B-204ENST00000554018 PDCD2LQ9BRP1 358 aa13.78□□□□□ -0.2
TRAPPC6B-204ENST00000554018 ANO2Q9NQ90 1003 aa13.78□□□□□ -0.2
TRAPPC6B-204ENST00000554018 MAP3K20Q9NYL2 800 aaKnown RBP13.78□□□□□ -0.2
TRAPPC6B-204ENST00000554018 SH2B2O14492 632 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC6B-204ENST00000554018 RGS20O76081 388 aa13.77□□□□□ -0.21
TRAPPC6B-204ENST00000554018 MMP3P08254 477 aa13.77□□□□□ -0.21
TRAPPC6B-204ENST00000554018 SUPT20HL2P0C7V6 817 aa13.77□□□□□ -0.21
TRAPPC6B-204ENST00000554018 TRAF1Q13077 416 aa13.77□□□□□ -0.21
TRAPPC6B-204ENST00000554018 NECTIN1Q15223 517 aa13.77□□□□□ -0.21
TRAPPC6B-204ENST00000554018 NFRKBQ6P4R8 1299 aa13.77□□□□□ -0.21
TRAPPC6B-204ENST00000554018 NFXL1Q6ZNB6 911 aa13.77□□□□□ -0.21
TRAPPC6B-204ENST00000554018 VSIG10LQ86VR7 867 aa13.77□□□□□ -0.21
TRAPPC6B-204ENST00000554018 FCHSD1Q86WN1 690 aa13.77□□□□□ -0.21
TRAPPC6B-204ENST00000554018 SCLYQ96I15 445 aa13.77□□□□□ -0.21
TRAPPC6B-204ENST00000554018 ZFP91Q96JP5 570 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC6B-204ENST00000554018 TANC1Q9C0D5 1861 aa13.77□□□□□ -0.21
TRAPPC6B-204ENST00000554018 CXXC1Q9P0U4 656 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC6B-204ENST00000554018 MRVI1Q9Y6F6 885 aa13.77□□□□□ -0.21
TRAPPC6B-204ENST00000554018 KAT6AQ92794 2004 aa13.76□□□□□ -0.21
TRAPPC6B-204ENST00000554018 SORBS3O60504 671 aa13.76□□□□□ -0.21
TRAPPC6B-204ENST00000554018 DDAH1O94760 285 aa13.76□□□□□ -0.21
TRAPPC6B-204ENST00000554018 FGBP02675 491 aa13.76□□□□□ -0.21
TRAPPC6B-204ENST00000554018 RXRAP19793 462 aa13.76□□□□□ -0.21
TRAPPC6B-204ENST00000554018 DNAJB2P25686 324 aa13.76□□□□□ -0.21
TRAPPC6B-204ENST00000554018 PBX2P40425 430 aa13.76□□□□□ -0.21
TRAPPC6B-204ENST00000554018 PGM5Q15124 567 aa13.76□□□□□ -0.21
TRAPPC6B-204ENST00000554018 OTOP2Q7RTS6 562 aa13.76□□□□□ -0.21
TRAPPC6B-204ENST00000554018 RAB11FIP4Q86YS3 637 aa13.76□□□□□ -0.21
TRAPPC6B-204ENST00000554018 SAMD3Q8N6K7 520 aa13.76□□□□□ -0.21
TRAPPC6B-204ENST00000554018 CTCFLQ8NI51 663 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC6B-204ENST00000554018 MYLIPQ8WY64 445 aa13.76□□□□□ -0.21
TRAPPC6B-204ENST00000554018 HERVK_113Q902F9 699 aa13.76□□□□□ -0.21
TRAPPC6B-204ENST00000554018 KAT2BQ92831 832 aa13.76□□□□□ -0.21
TRAPPC6B-204ENST00000554018 VWCEQ96DN2 955 aa13.76□□□□□ -0.21
TRAPPC6B-204ENST00000554018 MAP3K14Q99558 947 aa13.76□□□□□ -0.21
TRAPPC6B-204ENST00000554018 MTA3Q9BTC8 594 aa13.76□□□□□ -0.21
TRAPPC6B-204ENST00000554018 SPZ1Q9BXG8 430 aa13.76□□□□□ -0.21
TRAPPC6B-204ENST00000554018 LRRC2Q9BYS8 371 aa13.76□□□□□ -0.21
TRAPPC6B-204ENST00000554018 TTC28Q96AY4 2481 aa13.76□□□□□ -0.21
TRAPPC6B-204ENST00000554018 CCDC69A6NI79 296 aa13.75□□□□□ -0.21
TRAPPC6B-204ENST00000554018 PLEKHA8P1O95397 391 aa13.75□□□□□ -0.21
TRAPPC6B-204ENST00000554018 KIF5BP33176 963 aa13.75□□□□□ -0.21
TRAPPC6B-204ENST00000554018 SP2Q02086 613 aa13.75□□□□□ -0.21
TRAPPC6B-204ENST00000554018 PTPN11Q06124 597 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC6B-204ENST00000554018 LAMC2Q13753 1193 aa13.75□□□□□ -0.21
TRAPPC6B-204ENST00000554018 DGKDQ16760 1214 aa13.75□□□□□ -0.21
TRAPPC6B-204ENST00000554018 DHX37Q8IY37 1157 aaKnown RBP13.75□□□□□ -0.21
TRAPPC6B-204ENST00000554018 RPUSD2Q8IZ73 545 aaKnown RBP13.75□□□□□ -0.21
TRAPPC6B-204ENST00000554018 CMTR1Q8N1G2 835 aaKnown RBP13.75□□□□□ -0.21
TRAPPC6B-204ENST00000554018 TMTC2Q8N394 836 aa13.75□□□□□ -0.21
TRAPPC6B-204ENST00000554018 GPKOWQ92917 476 aaPredicted RBP eCLIP13.75□□□□□ -0.21
TRAPPC6B-204ENST00000554018 EMID1Q96A84 441 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC6B-204ENST00000554018 RRP36Q96EU6 259 aaKnown RBP13.75□□□□□ -0.21
TRAPPC6B-204ENST00000554018 TMEM87BQ96K49 555 aa13.75□□□□□ -0.21
TRAPPC6B-204ENST00000554018 CASTP20810 708 aaKnown RBP13.74□□□□□ -0.21
TRAPPC6B-204ENST00000554018 CCND2P30279 289 aa13.74□□□□□ -0.21
TRAPPC6B-204ENST00000554018 LIFRP42702 1097 aa13.74□□□□□ -0.21
TRAPPC6B-204ENST00000554018 GRIN2CQ14957 1233 aa13.74□□□□□ -0.21
TRAPPC6B-204ENST00000554018 MYSM1Q5VVJ2 828 aa13.74□□□□□ -0.21
TRAPPC6B-204ENST00000554018 GDF6Q6KF10 455 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC6B-204ENST00000554018 DEFB128Q7Z7B8 93 aa13.74□□□□□ -0.21
TRAPPC6B-204ENST00000554018 SRBD1Q8N5C6 995 aaKnown RBP13.74□□□□□ -0.21
TRAPPC6B-204ENST00000554018 PPTC7Q8NI37 304 aa13.74□□□□□ -0.21
TRAPPC6B-204ENST00000554018 TIFAQ96CG3 184 aa13.74□□□□□ -0.21
TRAPPC6B-204ENST00000554018 LZTS2Q9BRK4 669 aa13.74□□□□□ -0.21
TRAPPC6B-204ENST00000554018 PBX4Q9BYU1 374 aa13.74□□□□□ -0.21
TRAPPC6B-204ENST00000554018 NOD1Q9Y239 953 aa13.74□□□□□ -0.21
TRAPPC6B-204ENST00000554018 SPTBN5Q9NRC6 3674 aaKnown RBP13.73□□□□□ -0.21
TRAPPC6B-204ENST00000554018 TMEM265A0A087WTH1 108 aa13.73□□□□□ -0.21
TRAPPC6B-204ENST00000554018 GGPS1O95749 300 aa13.73□□□□□ -0.21
TRAPPC6B-204ENST00000554018 ZNF286BP0CG31 522 aa13.73□□□□□ -0.21
TRAPPC6B-204ENST00000554018 SMARCA1P28370 1054 aa13.73□□□□□ -0.21
TRAPPC6B-204ENST00000554018 PSEN2P49810 448 aa13.73□□□□□ -0.21
TRAPPC6B-204ENST00000554018 GNAQP50148 359 aa13.73□□□□□ -0.21
TRAPPC6B-204ENST00000554018 PTGISQ16647 500 aa13.73□□□□□ -0.21
TRAPPC6B-204ENST00000554018 CELF3Q5SZQ8 465 aaKnown RBP13.73□□□□□ -0.21
TRAPPC6B-204ENST00000554018 KCNV1Q6PIU1 500 aa13.73□□□□□ -0.21
TRAPPC6B-204ENST00000554018 USP17L6PQ6QN14 398 aa13.73□□□□□ -0.21
TRAPPC6B-204ENST00000554018 SPATA33Q96N06 139 aa13.73□□□□□ -0.21
TRAPPC6B-204ENST00000554018 CTAGE1Q96RT6 745 aa13.73□□□□□ -0.21
TRAPPC6B-204ENST00000554018 ALG1Q9BT22 464 aa13.73□□□□□ -0.21
TRAPPC6B-204ENST00000554018 MTIF3Q9H2K0 278 aaKnown RBP13.73□□□□□ -0.21
TRAPPC6B-204ENST00000554018 ZNF576Q9H609 170 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms