RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 PPARAQ07869 468 aa9.06□□□□□ -0.96
ABCD4-220ENST00000553998 IKQ13123 557 aaPredicted RBP9.06□□□□□ -0.96
ABCD4-220ENST00000553998 PPP2R5BQ15173 497 aa9.06□□□□□ -0.96
ABCD4-220ENST00000553998 TCTN1Q2MV58 587 aa9.06□□□□□ -0.96
ABCD4-220ENST00000553998 PTCRAQ6ISU1 281 aaPredicted RBP9.06□□□□□ -0.96
ABCD4-220ENST00000553998 CCDC62Q6P9F0 684 aa9.06□□□□□ -0.96
ABCD4-220ENST00000553998 TRAF7Q6Q0C0 670 aa9.06□□□□□ -0.96
ABCD4-220ENST00000553998 CWC27Q6UX04 472 aaKnown RBP9.06□□□□□ -0.96
ABCD4-220ENST00000553998 LRRC8DQ7L1W4 858 aa9.06□□□□□ -0.96
ABCD4-220ENST00000553998 TMCO2Q7Z6W1 182 aaPredicted RBP9.06□□□□□ -0.96
ABCD4-220ENST00000553998 SP7Q8TDD2 431 aaPredicted RBP9.06□□□□□ -0.96
ABCD4-220ENST00000553998 DCAF4Q8WV16 495 aa9.06□□□□□ -0.96
ABCD4-220ENST00000553998 KAT2BQ92831 832 aa9.06□□□□□ -0.96
ABCD4-220ENST00000553998 SNX27Q96L92 541 aa9.06□□□□□ -0.96
ABCD4-220ENST00000553998 SEC62Q99442 399 aaKnown RBP9.06□□□□□ -0.96
ABCD4-220ENST00000553998 ZBED2Q9BTP6 218 aa9.06□□□□□ -0.96
ABCD4-220ENST00000553998 PRKAG3Q9UGI9 489 aa9.06□□□□□ -0.96
ABCD4-220ENST00000553998 CTNNA3Q9UI47 895 aa9.06□□□□□ -0.96
ABCD4-220ENST00000553998 PNMA2Q9UL42 364 aa9.06□□□□□ -0.96
ABCD4-220ENST00000553998 SCN10AQ9Y5Y9 1956 aa9.05□□□□□ -0.96
ABCD4-220ENST00000553998 SGSM2O43147 1006 aa9.05□□□□□ -0.96
ABCD4-220ENST00000553998 ARIH2O95376 493 aa9.05□□□□□ -0.96
ABCD4-220ENST00000553998 SLC3A2P08195 630 aaKnown RBP9.05□□□□□ -0.96
ABCD4-220ENST00000553998 FGRP09769 529 aa9.05□□□□□ -0.96
ABCD4-220ENST00000553998 TXNP10599 105 aaKnown RBP9.05□□□□□ -0.96
ABCD4-220ENST00000553998 CKBP12277 381 aa9.05□□□□□ -0.96
ABCD4-220ENST00000553998 RPS6P62753 249 aaKnown RBP9.05□□□□□ -0.96
ABCD4-220ENST00000553998 IKBKEQ14164 716 aa9.05□□□□□ -0.96
ABCD4-220ENST00000553998 ALX1Q15699 326 aa9.05□□□□□ -0.96
ABCD4-220ENST00000553998 TRIM71Q2Q1W2 868 aaKnown RBP9.05□□□□□ -0.96
ABCD4-220ENST00000553998 GDF6Q6KF10 455 aaPredicted RBP9.05□□□□□ -0.96
ABCD4-220ENST00000553998 ZNF589Q86UQ0 364 aaPredicted RBP9.05□□□□□ -0.96
ABCD4-220ENST00000553998 COPS5Q92905 334 aa9.05□□□□□ -0.96
ABCD4-220ENST00000553998 MRPL38Q96DV4 380 aaKnown RBP9.05□□□□□ -0.96
ABCD4-220ENST00000553998 MPHOSPH6Q99547 160 aaKnown RBP9.05□□□□□ -0.96
ABCD4-220ENST00000553998 DSCC1Q9BVC3 393 aa9.05□□□□□ -0.96
ABCD4-220ENST00000553998 GTF2IRD1Q9UHL9 959 aa9.05□□□□□ -0.96
ABCD4-220ENST00000553998 STX8Q9UNK0 236 aa9.05□□□□□ -0.96
ABCD4-220ENST00000553998 NOD1Q9Y239 953 aa9.05□□□□□ -0.96
ABCD4-220ENST00000553998 INSL6Q9Y581 213 aa9.05□□□□□ -0.96
ABCD4-220ENST00000553998 ZMYM6O95789 1325 aa9.05□□□□□ -0.96
ABCD4-220ENST00000553998 PTPDC1A2A3K4 754 aa9.04□□□□□ -0.96
ABCD4-220ENST00000553998 EIF5BO60841 1220 aaKnown RBP9.04□□□□□ -0.96
ABCD4-220ENST00000553998 APPP05067 770 aa9.04□□□□□ -0.96
ABCD4-220ENST00000553998 HSPD1P10809 573 aaKnown RBP9.04□□□□□ -0.96
ABCD4-220ENST00000553998 SSTR3P32745 418 aaPredicted RBP9.04□□□□□ -0.96
ABCD4-220ENST00000553998 ZP2Q05996 745 aa9.04□□□□□ -0.96
ABCD4-220ENST00000553998 ARHGAP1Q07960 439 aa9.04□□□□□ -0.96
ABCD4-220ENST00000553998 PDE4DQ08499 809 aa9.04□□□□□ -0.96
ABCD4-220ENST00000553998 PTK7Q13308 1070 aa9.04□□□□□ -0.96
ABCD4-220ENST00000553998 MBTPS1Q14703 1052 aa9.04□□□□□ -0.96
ABCD4-220ENST00000553998 CSPP1Q1MSJ5 1256 aa9.04□□□□□ -0.96
ABCD4-220ENST00000553998 TTBK2Q6IQ55 1244 aa9.04□□□□□ -0.96
ABCD4-220ENST00000553998 RNF207Q6ZRF8 634 aa9.04□□□□□ -0.96
ABCD4-220ENST00000553998 RASGRP2Q7LDG7 609 aa9.04□□□□□ -0.96
ABCD4-220ENST00000553998 PPP1R13LQ8WUF5 828 aa9.04□□□□□ -0.96
ABCD4-220ENST00000553998 EMID1Q96A84 441 aaPredicted RBP9.04□□□□□ -0.96
ABCD4-220ENST00000553998 PABPC5Q96DU9 382 aaKnown RBP9.04□□□□□ -0.96
ABCD4-220ENST00000553998 SAMD11Q96NU1 681 aa9.04□□□□□ -0.96
ABCD4-220ENST00000553998 ESYT1Q9BSJ8 1104 aa9.04□□□□□ -0.96
ABCD4-220ENST00000553998 NAPBQ9H115 298 aa9.04□□□□□ -0.96
ABCD4-220ENST00000553998 TCP11L1Q9NUJ3 509 aa9.04□□□□□ -0.96
ABCD4-220ENST00000553998 ANAPC4Q9UJX5 808 aa9.04□□□□□ -0.96
ABCD4-220ENST00000553998 MTUS1Q9ULD2 1270 aa9.04□□□□□ -0.96
ABCD4-220ENST00000553998 WDR19Q8NEZ3 1342 aa9.04□□□□□ -0.96
ABCD4-220ENST00000553998 BRWD1Q9NSI6 2320 aa9.03□□□□□ -0.96
ABCD4-220ENST00000553998 B4DLN1 442 aa9.03□□□□□ -0.96
ABCD4-220ENST00000553998 H3BNC9 293 aa9.03□□□□□ -0.96
ABCD4-220ENST00000553998 HAS3O00219 553 aa9.03□□□□□ -0.96
ABCD4-220ENST00000553998 FOXP2O15409 715 aa9.03□□□□□ -0.96
ABCD4-220ENST00000553998 ORC4O43929 436 aa9.03□□□□□ -0.96
ABCD4-220ENST00000553998 NMT2O60551 498 aa9.03□□□□□ -0.96
ABCD4-220ENST00000553998 MMP3P08254 477 aa9.03□□□□□ -0.96
ABCD4-220ENST00000553998 CASTP20810 708 aaKnown RBP9.03□□□□□ -0.96
ABCD4-220ENST00000553998 CALML3P27482 149 aa9.03□□□□□ -0.96
ABCD4-220ENST00000553998 SLC16A2P36021 539 aa9.03□□□□□ -0.96
ABCD4-220ENST00000553998 MRPL12P52815 198 aaKnown RBP9.03□□□□□ -0.96
ABCD4-220ENST00000553998 PTPROQ16827 1216 aa9.03□□□□□ -0.96
ABCD4-220ENST00000553998 CTC1Q2NKJ3 1217 aa9.03□□□□□ -0.96
ABCD4-220ENST00000553998 TIGD5Q53EQ6 642 aa9.03□□□□□ -0.96
ABCD4-220ENST00000553998 VPS53Q5VIR6 699 aa9.03□□□□□ -0.96
ABCD4-220ENST00000553998 SYDE2Q5VT97 1194 aa9.03□□□□□ -0.96
ABCD4-220ENST00000553998 SLC30A10Q6XR72 485 aa9.03□□□□□ -0.96
ABCD4-220ENST00000553998 BMP8AQ7Z5Y6 402 aa9.03□□□□□ -0.96
ABCD4-220ENST00000553998 ADHFE1Q8IWW8 467 aa9.03□□□□□ -0.96
ABCD4-220ENST00000553998 FBXO22Q8NEZ5 403 aa9.03□□□□□ -0.96
ABCD4-220ENST00000553998 AFG1LQ8WV93 481 aa9.03□□□□□ -0.96
ABCD4-220ENST00000553998 C17orf80Q9BSJ5 609 aa9.03□□□□□ -0.96
ABCD4-220ENST00000553998 ISY1Q9ULR0 285 aaKnown RBP9.03□□□□□ -0.96
ABCD4-220ENST00000553998 FAM50BQ9Y247 325 aa9.03□□□□□ -0.96
ABCD4-220ENST00000553998 TRIOO75962 3097 aa9.02□□□□□ -0.97
ABCD4-220ENST00000553998 TSPY2A6NKD2 308 aa9.02□□□□□ -0.97
ABCD4-220ENST00000553998 EPB41L2O43491 1005 aaKnown RBP9.02□□□□□ -0.97
ABCD4-220ENST00000553998 NCK2O43639 380 aa9.02□□□□□ -0.97
ABCD4-220ENST00000553998 LGR5O75473 907 aa9.02□□□□□ -0.97
ABCD4-220ENST00000553998 GH1P01241 217 aa9.02□□□□□ -0.97
ABCD4-220ENST00000553998 FGAP02671 866 aa9.02□□□□□ -0.97
ABCD4-220ENST00000553998 SNHG28P0DPA3 235 aa9.02□□□□□ -0.97
ABCD4-220ENST00000553998 HOXD8P13378 290 aaPredicted RBP9.02□□□□□ -0.97
ABCD4-220ENST00000553998 LTBRP36941 435 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms