RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 KRT79Q5XKE5 535 aa14.31□□□□□ -0.12
VIPAS39-206ENST00000553888 FAM160B2Q86V87 743 aa14.31□□□□□ -0.12
VIPAS39-206ENST00000553888 LRRC8AQ8IWT6 810 aa14.31□□□□□ -0.12
VIPAS39-206ENST00000553888 NELFBQ8WX92 580 aa14.31□□□□□ -0.12
VIPAS39-206ENST00000553888 CCPG1Q9ULG6 757 aa14.31□□□□□ -0.12
VIPAS39-206ENST00000553888 CYP3A7-CYP3A51PA0A087WV96 503 aa14.3□□□□□ -0.12
VIPAS39-206ENST00000553888 POTEB3A0JP26 581 aa14.3□□□□□ -0.12
VIPAS39-206ENST00000553888 POTECB2RU33 542 aa14.3□□□□□ -0.12
VIPAS39-206ENST00000553888 CYP3A7P24462 503 aa14.3□□□□□ -0.12
VIPAS39-206ENST00000553888 PDIA5Q14554 519 aa14.3□□□□□ -0.12
VIPAS39-206ENST00000553888 POTEBQ6S5H4 581 aa14.3□□□□□ -0.12
VIPAS39-206ENST00000553888 KIAA1524Q8TCG1 905 aa14.3□□□□□ -0.12
VIPAS39-206ENST00000553888 MBOAT7Q96N66 472 aa14.3□□□□□ -0.12
VIPAS39-206ENST00000553888 SLF1Q9BQI6 1058 aa14.3□□□□□ -0.12
VIPAS39-206ENST00000553888 KIAA1683Q9H0B3 1180 aa14.3□□□□□ -0.12
VIPAS39-206ENST00000553888 RPAP3Q9H6T3 665 aaPredicted RBP14.3□□□□□ -0.12
VIPAS39-206ENST00000553888 E9PMD0 336 aa14.3□□□□□ -0.12
VIPAS39-206ENST00000553888 MSH4O15457 936 aa14.3□□□□□ -0.12
VIPAS39-206ENST00000553888 CCT6AP40227 531 aaKnown RBP14.3□□□□□ -0.12
VIPAS39-206ENST00000553888 SPATA1Q5VX52 437 aa14.3□□□□□ -0.12
VIPAS39-206ENST00000553888 ARMCX5Q6P1M9 558 aa14.3□□□□□ -0.12
VIPAS39-206ENST00000553888 CREBRFQ8IUR6 639 aa14.3□□□□□ -0.12
VIPAS39-206ENST00000553888 APOBEC3FQ8IUX4 373 aaKnown RBP14.3□□□□□ -0.12
VIPAS39-206ENST00000553888 LARP4BQ92615 738 aaKnown RBP14.3□□□□□ -0.12
VIPAS39-206ENST00000553888 WDR18Q9BV38 432 aa14.3□□□□□ -0.12
VIPAS39-206ENST00000553888 COL20A1Q9P218 1284 aa14.3□□□□□ -0.12
VIPAS39-206ENST00000553888 GCOM1H8Y6P7 765 aaPredicted RBP14.29□□□□□ -0.12
VIPAS39-206ENST00000553888 PIK3CDO00329 1044 aa14.29□□□□□ -0.12
VIPAS39-206ENST00000553888 MED24O75448 989 aa14.29□□□□□ -0.12
VIPAS39-206ENST00000553888 POLR2MP0CAP2 368 aa14.29□□□□□ -0.12
VIPAS39-206ENST00000553888 PTPRAP18433 802 aa14.29□□□□□ -0.12
VIPAS39-206ENST00000553888 ZNF76P36508 570 aa14.29□□□□□ -0.12
VIPAS39-206ENST00000553888 SPIRE1Q08AE8 756 aa14.29□□□□□ -0.12
VIPAS39-206ENST00000553888 STK4Q13043 487 aa14.29□□□□□ -0.12
VIPAS39-206ENST00000553888 MUM1L1Q5H9M0 696 aa14.29□□□□□ -0.12
VIPAS39-206ENST00000553888 NCAPH2Q6IBW4 605 aa14.29□□□□□ -0.12
VIPAS39-206ENST00000553888 SCYL3Q8IZE3 742 aa14.29□□□□□ -0.12
VIPAS39-206ENST00000553888 ZHX2Q9Y6X8 837 aa14.29□□□□□ -0.12
VIPAS39-206ENST00000553888 RLFQ13129 1914 aa14.29□□□□□ -0.12
VIPAS39-206ENST00000553888 ADM5C9JUS6 153 aa14.29□□□□□ -0.12
VIPAS39-206ENST00000553888 WDR46O15213 610 aaKnown RBP14.29□□□□□ -0.12
VIPAS39-206ENST00000553888 TEX33O43247 280 aa14.29□□□□□ -0.12
VIPAS39-206ENST00000553888 ALAS1P13196 640 aa14.29□□□□□ -0.12
VIPAS39-206ENST00000553888 HMGCS2P54868 508 aa14.29□□□□□ -0.12
VIPAS39-206ENST00000553888 CACNB1Q02641 598 aaPredicted RBP14.29□□□□□ -0.12
VIPAS39-206ENST00000553888 PDE4DQ08499 809 aa14.29□□□□□ -0.12
VIPAS39-206ENST00000553888 PAK1Q13153 545 aa14.29□□□□□ -0.12
VIPAS39-206ENST00000553888 NOLC1Q14978 699 aaKnown RBP eCLIP14.29□□□□□ -0.12
VIPAS39-206ENST00000553888 TMEM119Q4V9L6 283 aa14.29□□□□□ -0.12
VIPAS39-206ENST00000553888 RAD54LQ92698 747 aa14.29□□□□□ -0.12
VIPAS39-206ENST00000553888 RAB34Q9BZG1 259 aa14.29□□□□□ -0.12
VIPAS39-206ENST00000553888 KIAA1024Q9UPX6 916 aa14.29□□□□□ -0.12
VIPAS39-206ENST00000553888 POTEFA5A3E0 1075 aa14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 MEIS1O00470 390 aa14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 FOSP01100 380 aaPredicted RBP14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 SSBP05455 408 aaKnown RBP eCLIP14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 POTEIP0CG38 1075 aa14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 RAD51AP2Q09MP3 1159 aa14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 DCAF15Q66K64 600 aa14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 POTEGQ6S5H5 508 aa14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 POTEEQ6S8J3 1075 aa14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 SV2BQ7L1I2 683 aa14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 APTXQ7Z2E3 356 aaKnown RBP14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 PRPF38AQ8NAV1 312 aaKnown RBP14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 GLIS3Q8NEA6 775 aa14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 PURBQ96QR8 312 aaKnown RBP14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 C7orf25Q9BPX7 421 aa14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 RMND1Q9NWS8 449 aa14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 IGLV3-22A0A075B6J6 115 aa14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 NPHP3-ACAD11A0A0J9YXS1 232 aa14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 PLA2G6O60733 806 aa14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 RHOBTB3O94955 611 aa14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 ADSSL1Q8N142 457 aa14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 CUEDC2Q9H467 287 aa14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 SLC39A2Q9NP94 309 aa14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 ZNF112Q9UJU3 913 aa14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 MRPL11Q9Y3B7 192 aaKnown RBP14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 ABCB11O95342 1321 aa14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 ICAM1P05362 532 aa14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 TPM3P06753 285 aa14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 CCZ1BP86790 482 aa14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 CCZ1P86791 482 aaPredicted RBP14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 Q4G0T1 1027 aa14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 CDKAL1Q5VV42 579 aa14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 IL31RAQ8NI17 732 aa14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 CLEC4DQ8WXI8 215 aa14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 ATG4CQ96DT6 458 aa14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 KLRG1Q96E93 195 aa14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 PICK1Q9NRD5 415 aa14.28□□□□□ -0.12
VIPAS39-206ENST00000553888 RBBP6Q7Z6E9 1792 aaKnown RBP14.27□□□□□ -0.12
VIPAS39-206ENST00000553888 EML1O00423 815 aa14.27□□□□□ -0.12
VIPAS39-206ENST00000553888 PSMC6P62333 389 aa14.27□□□□□ -0.12
VIPAS39-206ENST00000553888 CYP4A11Q02928 519 aa14.27□□□□□ -0.12
VIPAS39-206ENST00000553888 KCNB1Q14721 858 aa14.27□□□□□ -0.12
VIPAS39-206ENST00000553888 TPD52L1Q16890 204 aaPredicted RBP14.27□□□□□ -0.12
VIPAS39-206ENST00000553888 KIAA0895Q8NCT3 520 aa14.27□□□□□ -0.12
VIPAS39-206ENST00000553888 GIMAP8Q8ND71 665 aaPredicted RBP14.27□□□□□ -0.12
VIPAS39-206ENST00000553888 LPAR1Q92633 364 aa14.27□□□□□ -0.12
VIPAS39-206ENST00000553888 EXOC1Q9NV70 894 aa14.27□□□□□ -0.12
VIPAS39-206ENST00000553888 OTOFQ9HC10 1997 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms