RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 FAM117BQ6P1L5 589 aa10.66□□□□□ -0.7
SYNE2-209ENST00000553308 TBC1D10CQ8IV04 446 aa10.66□□□□□ -0.7
SYNE2-209ENST00000553308 TBC1D5Q92609 795 aa10.66□□□□□ -0.7
SYNE2-209ENST00000553308 WNT8BQ93098 351 aa10.66□□□□□ -0.7
SYNE2-209ENST00000553308 TAAR1Q96RJ0 339 aa10.66□□□□□ -0.7
SYNE2-209ENST00000553308 UBE2ZQ9H832 354 aaPredicted RBP10.66□□□□□ -0.7
SYNE2-209ENST00000553308 LMCD1Q9NZU5 365 aa10.66□□□□□ -0.7
SYNE2-209ENST00000553308 HDAC6Q9UBN7 1215 aa10.66□□□□□ -0.7
SYNE2-209ENST00000553308 GTF2IRD1Q9UHL9 959 aa10.66□□□□□ -0.7
SYNE2-209ENST00000553308 KIAA1217Q5T5P2 1943 aa10.65□□□□□ -0.7
SYNE2-209ENST00000553308 ABHD14A-ACY1A0A1B0GW23 586 aa10.65□□□□□ -0.7
SYNE2-209ENST00000553308 PI4K2BG5E9Z4 385 aa10.65□□□□□ -0.7
SYNE2-209ENST00000553308 ZNF286BP0CG31 522 aa10.65□□□□□ -0.7
SYNE2-209ENST00000553308 HSPD1P10809 573 aaKnown RBP10.65□□□□□ -0.7
SYNE2-209ENST00000553308 CASTP20810 708 aaKnown RBP10.65□□□□□ -0.7
SYNE2-209ENST00000553308 CDC37Q16543 378 aaPredicted RBP10.65□□□□□ -0.7
SYNE2-209ENST00000553308 TRAF7Q6Q0C0 670 aa10.65□□□□□ -0.7
SYNE2-209ENST00000553308 ZNF589Q86UQ0 364 aaPredicted RBP10.65□□□□□ -0.7
SYNE2-209ENST00000553308 SYTL5Q8TDW5 730 aaPredicted RBP10.65□□□□□ -0.7
SYNE2-209ENST00000553308 EVI5LQ96CN4 794 aa10.65□□□□□ -0.7
SYNE2-209ENST00000553308 TGS1Q96RS0 853 aaKnown RBP10.65□□□□□ -0.7
SYNE2-209ENST00000553308 RAD9AQ99638 391 aa10.65□□□□□ -0.7
SYNE2-209ENST00000553308 ZKSCAN3Q9BRR0 538 aa10.65□□□□□ -0.7
SYNE2-209ENST00000553308 ALG1Q9BT22 464 aa10.65□□□□□ -0.7
SYNE2-209ENST00000553308 UBA5Q9GZZ9 404 aa10.65□□□□□ -0.7
SYNE2-209ENST00000553308 HELLSQ9NRZ9 838 aa10.65□□□□□ -0.7
SYNE2-209ENST00000553308 ZMYM6O95789 1325 aa10.64□□□□□ -0.71
SYNE2-209ENST00000553308 NEDD4P46934 1319 aa10.64□□□□□ -0.71
SYNE2-209ENST00000553308 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.64□□□□□ -0.71
SYNE2-209ENST00000553308 PARNO95453 639 aaKnown RBP10.64□□□□□ -0.71
SYNE2-209ENST00000553308 KCNA5P22460 613 aa10.64□□□□□ -0.71
SYNE2-209ENST00000553308 PSEN2P49810 448 aa10.64□□□□□ -0.71
SYNE2-209ENST00000553308 ZNF200P98182 395 aaPredicted RBP10.64□□□□□ -0.71
SYNE2-209ENST00000553308 MBTPS1Q14703 1052 aa10.64□□□□□ -0.71
SYNE2-209ENST00000553308 MFSD10Q14728 455 aa10.64□□□□□ -0.71
SYNE2-209ENST00000553308 DGKDQ16760 1214 aa10.64□□□□□ -0.71
SYNE2-209ENST00000553308 TRIM71Q2Q1W2 868 aaKnown RBP10.64□□□□□ -0.71
SYNE2-209ENST00000553308 GPATCH4Q5T3I0 446 aaKnown RBP10.64□□□□□ -0.71
SYNE2-209ENST00000553308 ZNF618Q5T7W0 954 aa10.64□□□□□ -0.71
SYNE2-209ENST00000553308 DIEXFQ68CQ4 756 aaKnown RBP10.64□□□□□ -0.71
SYNE2-209ENST00000553308 C7orf31Q8N865 590 aa10.64□□□□□ -0.71
SYNE2-209ENST00000553308 RGS22Q8NE09 1264 aa10.64□□□□□ -0.71
SYNE2-209ENST00000553308 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.64□□□□□ -0.71
SYNE2-209ENST00000553308 NSUN6Q8TEA1 469 aaKnown RBP10.64□□□□□ -0.71
SYNE2-209ENST00000553308 TTC14Q96N46 770 aa10.64□□□□□ -0.71
SYNE2-209ENST00000553308 C17orf80Q9BSJ5 609 aa10.64□□□□□ -0.71
SYNE2-209ENST00000553308 ABCB11O95342 1321 aa10.63□□□□□ -0.71
SYNE2-209ENST00000553308 HAS3O00219 553 aa10.63□□□□□ -0.71
SYNE2-209ENST00000553308 F2P00734 622 aa10.63□□□□□ -0.71
SYNE2-209ENST00000553308 IL9P15248 144 aa10.63□□□□□ -0.71
SYNE2-209ENST00000553308 EIF2AK2P19525 551 aaKnown RBP10.63□□□□□ -0.71
SYNE2-209ENST00000553308 NMIQ13287 307 aaPredicted RBP10.63□□□□□ -0.71
SYNE2-209ENST00000553308 PTK7Q13308 1070 aa10.63□□□□□ -0.71
SYNE2-209ENST00000553308 IKBKEQ14164 716 aa10.63□□□□□ -0.71
SYNE2-209ENST00000553308 HIC1Q14526 733 aa10.63□□□□□ -0.71
SYNE2-209ENST00000553308 STXBP2Q15833 593 aa10.63□□□□□ -0.71
SYNE2-209ENST00000553308 KIAA0753Q2KHM9 967 aa10.63□□□□□ -0.71
SYNE2-209ENST00000553308 LEXMQ3ZCV2 418 aa10.63□□□□□ -0.71
SYNE2-209ENST00000553308 MCMDC2Q4G0Z9 681 aa10.63□□□□□ -0.71
SYNE2-209ENST00000553308 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.63□□□□□ -0.71
SYNE2-209ENST00000553308 MFSD6Q6ZSS7 791 aa10.63□□□□□ -0.71
SYNE2-209ENST00000553308 FAM178BQ8IXR5 827 aa10.63□□□□□ -0.71
SYNE2-209ENST00000553308 GJD3Q8N144 294 aa10.63□□□□□ -0.71
SYNE2-209ENST00000553308 FBXO22Q8NEZ5 403 aa10.63□□□□□ -0.71
SYNE2-209ENST00000553308 EMID1Q96A84 441 aaPredicted RBP10.63□□□□□ -0.71
SYNE2-209ENST00000553308 CRBNQ96SW2 442 aa10.63□□□□□ -0.71
SYNE2-209ENST00000553308 RMDN3Q96TC7 470 aa10.63□□□□□ -0.71
SYNE2-209ENST00000553308 KATNAL1Q9BW62 490 aa10.63□□□□□ -0.71
SYNE2-209ENST00000553308 DDX41Q9UJV9 622 aaKnown RBP10.63□□□□□ -0.71
SYNE2-209ENST00000553308 BRWD1Q9NSI6 2320 aa10.63□□□□□ -0.71
SYNE2-209ENST00000553308 CCDC171Q6TFL3 1326 aa10.62□□□□□ -0.71
SYNE2-209ENST00000553308 SORBS3O60504 671 aa10.62□□□□□ -0.71
SYNE2-209ENST00000553308 EFCAB14O75071 495 aa10.62□□□□□ -0.71
SYNE2-209ENST00000553308 LGR5O75473 907 aa10.62□□□□□ -0.71
SYNE2-209ENST00000553308 SSTR3P32745 418 aaPredicted RBP10.62□□□□□ -0.71
SYNE2-209ENST00000553308 PDE1AP54750 535 aa10.62□□□□□ -0.71
SYNE2-209ENST00000553308 MKRN4PQ13434 485 aaPredicted RBP10.62□□□□□ -0.71
SYNE2-209ENST00000553308 QRICH1Q2TAL8 776 aa10.62□□□□□ -0.71
SYNE2-209ENST00000553308 ARHGEF16Q5VV41 709 aa10.62□□□□□ -0.71
SYNE2-209ENST00000553308 PTCRAQ6ISU1 281 aaPredicted RBP10.62□□□□□ -0.71
SYNE2-209ENST00000553308 ADGRF4Q8IZF3 695 aa10.62□□□□□ -0.71
SYNE2-209ENST00000553308 MYOCDQ8IZQ8 938 aa10.62□□□□□ -0.71
SYNE2-209ENST00000553308 PNMA1Q8ND90 353 aa10.62□□□□□ -0.71
SYNE2-209ENST00000553308 PPTC7Q8NI37 304 aa10.62□□□□□ -0.71
SYNE2-209ENST00000553308 IWS1Q96ST2 819 aa10.62□□□□□ -0.71
SYNE2-209ENST00000553308 PXMP2Q9NR77 195 aa10.62□□□□□ -0.71
SYNE2-209ENST00000553308 MRVI1Q9Y6F6 885 aa10.62□□□□□ -0.71
SYNE2-209ENST00000553308 LAMA4Q16363 1823 aa10.62□□□□□ -0.71
SYNE2-209ENST00000553308 MICAL3Q7RTP6 2002 aa10.62□□□□□ -0.71
SYNE2-209ENST00000553308 PRR33A8MZF0 331 aa10.61□□□□□ -0.71
SYNE2-209ENST00000553308 NR3C2P08235 984 aa10.61□□□□□ -0.71
SYNE2-209ENST00000553308 PCP11498 1178 aaKnown RBP10.61□□□□□ -0.71
SYNE2-209ENST00000553308 LAMC2Q13753 1193 aa10.61□□□□□ -0.71
SYNE2-209ENST00000553308 ANKRD45Q5TZF3 282 aa10.61□□□□□ -0.71
SYNE2-209ENST00000553308 FBXO11Q86XK2 927 aa10.61□□□□□ -0.71
SYNE2-209ENST00000553308 DGKHQ86XP1 1220 aa10.61□□□□□ -0.71
SYNE2-209ENST00000553308 MCF2L2Q86YR7 1114 aa10.61□□□□□ -0.71
SYNE2-209ENST00000553308 DHX37Q8IY37 1157 aaKnown RBP10.61□□□□□ -0.71
SYNE2-209ENST00000553308 DBF4BQ8NFT6 615 aa10.61□□□□□ -0.71
SYNE2-209ENST00000553308 ESR2Q92731 530 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms