RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 SYDE2Q5VT97 1194 aa18.04■□□□□ 0.48
CACNB3-220ENST00000551716 BMP8AQ7Z5Y6 402 aa18.04■□□□□ 0.48
CACNB3-220ENST00000551716 SIRT2Q8IXJ6 389 aa18.04■□□□□ 0.48
CACNB3-220ENST00000551716 PANK1Q8TE04 598 aa18.04■□□□□ 0.48
CACNB3-220ENST00000551716 AFG1LQ8WV93 481 aa18.04■□□□□ 0.48
CACNB3-220ENST00000551716 DHX38Q92620 1227 aaKnown RBP18.04■□□□□ 0.48
CACNB3-220ENST00000551716 KATNAL1Q9BW62 490 aa18.04■□□□□ 0.48
CACNB3-220ENST00000551716 LRRCC1Q9C099 1032 aa18.04■□□□□ 0.48
CACNB3-220ENST00000551716 NAPBQ9H115 298 aa18.04■□□□□ 0.48
CACNB3-220ENST00000551716 TANC1Q9C0D5 1861 aa18.03■□□□□ 0.48
CACNB3-220ENST00000551716 MMP3P08254 477 aa18.03■□□□□ 0.48
CACNB3-220ENST00000551716 IRS1P35568 1242 aa18.03■□□□□ 0.48
CACNB3-220ENST00000551716 RPS6P62753 249 aaKnown RBP18.03■□□□□ 0.48
CACNB3-220ENST00000551716 TCEAL5Q5H9L2 206 aa18.03■□□□□ 0.48
CACNB3-220ENST00000551716 CCDC62Q6P9F0 684 aa18.03■□□□□ 0.48
CACNB3-220ENST00000551716 RGS22Q8NE09 1264 aa18.03■□□□□ 0.48
CACNB3-220ENST00000551716 CLEC4DQ8WXI8 215 aa18.03■□□□□ 0.48
CACNB3-220ENST00000551716 KAT2BQ92831 832 aa18.03■□□□□ 0.48
CACNB3-220ENST00000551716 GPATCH3Q96I76 525 aa18.03■□□□□ 0.48
CACNB3-220ENST00000551716 CCER2I3L3R5 266 aa18.02■□□□□ 0.48
CACNB3-220ENST00000551716 SMAD2Q15796 467 aaKnown RBP18.02■□□□□ 0.48
CACNB3-220ENST00000551716 SLC30A10Q6XR72 485 aa18.02■□□□□ 0.48
CACNB3-220ENST00000551716 EDAQ92838 391 aa18.02■□□□□ 0.48
CACNB3-220ENST00000551716 IL17RBQ9NRM6 502 aa18.02■□□□□ 0.48
CACNB3-220ENST00000551716 CLDND1Q9NY35 253 aa18.02■□□□□ 0.48
CACNB3-220ENST00000551716 HDAC6Q9UBN7 1215 aa18.02■□□□□ 0.48
CACNB3-220ENST00000551716 WDFY4Q6ZS81 3184 aa18.01■□□□□ 0.47
CACNB3-220ENST00000551716 SLC16A2P36021 539 aa18.01■□□□□ 0.47
CACNB3-220ENST00000551716 NOVP48745 357 aa18.01■□□□□ 0.47
CACNB3-220ENST00000551716 TCTN1Q2MV58 587 aa18.01■□□□□ 0.47
CACNB3-220ENST00000551716 ZNF618Q5T7W0 954 aa18.01■□□□□ 0.47
CACNB3-220ENST00000551716 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.01■□□□□ 0.47
CACNB3-220ENST00000551716 TMEM192Q8IY95 271 aa18.01■□□□□ 0.47
CACNB3-220ENST00000551716 MYOCDQ8IZQ8 938 aa18.01■□□□□ 0.47
CACNB3-220ENST00000551716 YME1L1Q96TA2 773 aa18.01■□□□□ 0.47
CACNB3-220ENST00000551716 IRF2BPLQ9H1B7 796 aa18.01■□□□□ 0.47
CACNB3-220ENST00000551716 ZBTB40Q9NUA8 1239 aa18.01■□□□□ 0.47
CACNB3-220ENST00000551716 DDX19BQ9UMR2 479 aa18.01■□□□□ 0.47
CACNB3-220ENST00000551716 MTMR7Q9Y216 660 aa18.01■□□□□ 0.47
CACNB3-220ENST00000551716 WDR19Q8NEZ3 1342 aa18■□□□□ 0.47
CACNB3-220ENST00000551716 M0R2C6 588 aa18■□□□□ 0.47
CACNB3-220ENST00000551716 ARIH2O95376 493 aa18■□□□□ 0.47
CACNB3-220ENST00000551716 PSEN2P49810 448 aa18■□□□□ 0.47
CACNB3-220ENST00000551716 ARHGAP1Q07960 439 aa18■□□□□ 0.47
CACNB3-220ENST00000551716 TTBK2Q6IQ55 1244 aa18■□□□□ 0.47
CACNB3-220ENST00000551716 ZNF318Q5VUA4 2279 aa18■□□□□ 0.47
CACNB3-220ENST00000551716 RSPH10B2B2RC85 870 aa17.99■□□□□ 0.47
CACNB3-220ENST00000551716 RANBP6O60518 1105 aaKnown RBP17.99■□□□□ 0.47
CACNB3-220ENST00000551716 RSPH10BP0C881 870 aa17.99■□□□□ 0.47
CACNB3-220ENST00000551716 TOP1P11387 765 aaKnown RBP17.99■□□□□ 0.47
CACNB3-220ENST00000551716 LAMC2Q13753 1193 aa17.99■□□□□ 0.47
CACNB3-220ENST00000551716 LY6KQ17RY6 165 aa17.99■□□□□ 0.47
CACNB3-220ENST00000551716 TRIM71Q2Q1W2 868 aaKnown RBP17.99■□□□□ 0.47
CACNB3-220ENST00000551716 TRAF7Q6Q0C0 670 aa17.99■□□□□ 0.47
CACNB3-220ENST00000551716 SEPT14Q6ZU15 432 aa17.99■□□□□ 0.47
CACNB3-220ENST00000551716 FBXO11Q86XK2 927 aa17.99■□□□□ 0.47
CACNB3-220ENST00000551716 RNF135Q8IUD6 432 aa17.99■□□□□ 0.47
CACNB3-220ENST00000551716 DBF4BQ8NFT6 615 aa17.99■□□□□ 0.47
CACNB3-220ENST00000551716 TOP1MTQ969P6 601 aa17.99■□□□□ 0.47
CACNB3-220ENST00000551716 EMID1Q96A84 441 aaPredicted RBP17.99■□□□□ 0.47
CACNB3-220ENST00000551716 IWS1Q96ST2 819 aa17.99■□□□□ 0.47
CACNB3-220ENST00000551716 LMAN2LQ9H0V9 348 aa17.99■□□□□ 0.47
CACNB3-220ENST00000551716 MUTYHQ9UIF7 546 aa17.99■□□□□ 0.47
CACNB3-220ENST00000551716 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.99■□□□□ 0.47
CACNB3-220ENST00000551716 TRIP12Q14669 1992 aaPredicted RBP17.99■□□□□ 0.47
CACNB3-220ENST00000551716 MYH7P12883 1935 aa17.98■□□□□ 0.47
CACNB3-220ENST00000551716 NMT2O60551 498 aa17.98■□□□□ 0.47
CACNB3-220ENST00000551716 RB1P06400 928 aa17.98■□□□□ 0.47
CACNB3-220ENST00000551716 MKRN4PQ13434 485 aaPredicted RBP17.98■□□□□ 0.47
CACNB3-220ENST00000551716 MFSD10Q14728 455 aa17.98■□□□□ 0.47
CACNB3-220ENST00000551716 STXBP2Q15833 593 aa17.98■□□□□ 0.47
CACNB3-220ENST00000551716 KIAA0753Q2KHM9 967 aa17.98■□□□□ 0.47
CACNB3-220ENST00000551716 CTC1Q2NKJ3 1217 aa17.98■□□□□ 0.47
CACNB3-220ENST00000551716 PLEKHG4Q58EX7 1191 aa17.98■□□□□ 0.47
CACNB3-220ENST00000551716 CHST3Q7LGC8 479 aa17.98■□□□□ 0.47
CACNB3-220ENST00000551716 RPAINQ86UA6 219 aa17.98■□□□□ 0.47
CACNB3-220ENST00000551716 SUGP1Q8IWZ8 645 aaKnown RBP17.98■□□□□ 0.47
CACNB3-220ENST00000551716 NSUN6Q8TEA1 469 aaKnown RBP17.98■□□□□ 0.47
CACNB3-220ENST00000551716 SEPT8Q92599 483 aa17.98■□□□□ 0.47
CACNB3-220ENST00000551716 PBXIP1Q96AQ6 731 aa17.98■□□□□ 0.47
CACNB3-220ENST00000551716 ALG1Q9BT22 464 aa17.98■□□□□ 0.47
CACNB3-220ENST00000551716 SIP14410 1827 aa17.98■□□□□ 0.47
CACNB3-220ENST00000551716 PPFIA4O75335 1185 aa17.97■□□□□ 0.47
CACNB3-220ENST00000551716 LTBRP36941 435 aa17.97■□□□□ 0.47
CACNB3-220ENST00000551716 MBTPS1Q14703 1052 aa17.97■□□□□ 0.47
CACNB3-220ENST00000551716 DHX37Q8IY37 1157 aaKnown RBP17.97■□□□□ 0.47
CACNB3-220ENST00000551716 PRSS33Q8NF86 280 aa17.97■□□□□ 0.47
CACNB3-220ENST00000551716 PHOX2BQ99453 314 aa17.97■□□□□ 0.47
CACNB3-220ENST00000551716 GPCPD1Q9NPB8 672 aa17.97■□□□□ 0.47
CACNB3-220ENST00000551716 RWDD3Q9Y3V2 267 aa17.97■□□□□ 0.47
CACNB3-220ENST00000551716 PTPRSQ13332 1948 aa17.97■□□□□ 0.47
CACNB3-220ENST00000551716 STXBP3O00186 592 aa17.96■□□□□ 0.47
CACNB3-220ENST00000551716 HAS3O00219 553 aa17.96■□□□□ 0.47
CACNB3-220ENST00000551716 MBTPS2O43462 519 aa17.96■□□□□ 0.47
CACNB3-220ENST00000551716 F2P00734 622 aa17.96■□□□□ 0.47
CACNB3-220ENST00000551716 THPOP40225 353 aa17.96■□□□□ 0.47
CACNB3-220ENST00000551716 SMAD4Q13485 552 aaKnown RBP17.96■□□□□ 0.47
CACNB3-220ENST00000551716 TRIM67Q6ZTA4 783 aa17.96■□□□□ 0.47
CACNB3-220ENST00000551716 PPTC7Q8NI37 304 aa17.96■□□□□ 0.47
CACNB3-220ENST00000551716 C11orf84Q9BUA3 381 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms