RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 MBTPS1Q14703 1052 aa14.13□□□□□ -0.15
PTCH1-222ENST00000551425 CCDC62Q6P9F0 684 aa14.13□□□□□ -0.15
PTCH1-222ENST00000551425 SLC30A10Q6XR72 485 aa14.13□□□□□ -0.15
PTCH1-222ENST00000551425 TRIM67Q6ZTA4 783 aa14.13□□□□□ -0.15
PTCH1-222ENST00000551425 RPAINQ86UA6 219 aa14.13□□□□□ -0.15
PTCH1-222ENST00000551425 DNERQ8NFT8 737 aa14.13□□□□□ -0.15
PTCH1-222ENST00000551425 AFG1LQ8WV93 481 aa14.13□□□□□ -0.15
PTCH1-222ENST00000551425 OSBP2Q969R2 916 aa14.13□□□□□ -0.15
PTCH1-222ENST00000551425 PBXIP1Q96AQ6 731 aa14.13□□□□□ -0.15
PTCH1-222ENST00000551425 CHMP4CQ96CF2 233 aa14.13□□□□□ -0.15
PTCH1-222ENST00000551425 TECTAO75443 2155 aa14.13□□□□□ -0.15
PTCH1-222ENST00000551425 ZFHX2Q9C0A1 2572 aaPredicted RBP14.13□□□□□ -0.15
PTCH1-222ENST00000551425 EMSYQ7Z589 1322 aa14.13□□□□□ -0.15
PTCH1-222ENST00000551425 TRIP12Q14669 1992 aaPredicted RBP14.13□□□□□ -0.15
PTCH1-222ENST00000551425 COL4A6Q14031 1691 aa14.12□□□□□ -0.15
PTCH1-222ENST00000551425 TMEM221A6NGB7 291 aa14.12□□□□□ -0.15
PTCH1-222ENST00000551425 M0R296 226 aa14.12□□□□□ -0.15
PTCH1-222ENST00000551425 ARIH2O95376 493 aa14.12□□□□□ -0.15
PTCH1-222ENST00000551425 CALML3P27482 149 aa14.12□□□□□ -0.15
PTCH1-222ENST00000551425 ZNF618Q5T7W0 954 aa14.12□□□□□ -0.15
PTCH1-222ENST00000551425 BTNL9Q6UXG8 535 aa14.12□□□□□ -0.15
PTCH1-222ENST00000551425 RNF207Q6ZRF8 634 aa14.12□□□□□ -0.15
PTCH1-222ENST00000551425 FBXO11Q86XK2 927 aa14.12□□□□□ -0.15
PTCH1-222ENST00000551425 TMEM192Q8IY95 271 aa14.12□□□□□ -0.15
PTCH1-222ENST00000551425 MYOCDQ8IZQ8 938 aa14.12□□□□□ -0.15
PTCH1-222ENST00000551425 CLEC4DQ8WXI8 215 aa14.12□□□□□ -0.15
PTCH1-222ENST00000551425 APPBP2Q92624 585 aa14.12□□□□□ -0.15
PTCH1-222ENST00000551425 ALG13Q9NP73 1137 aaKnown RBP14.12□□□□□ -0.15
PTCH1-222ENST00000551425 HDAC6Q9UBN7 1215 aa14.12□□□□□ -0.15
PTCH1-222ENST00000551425 ZDBF2Q9HCK1 2354 aa14.11□□□□□ -0.15
PTCH1-222ENST00000551425 B4DLN1 442 aa14.11□□□□□ -0.15
PTCH1-222ENST00000551425 GPAA1O43292 621 aa14.11□□□□□ -0.15
PTCH1-222ENST00000551425 CASTP20810 708 aaKnown RBP14.11□□□□□ -0.15
PTCH1-222ENST00000551425 MRPL12P52815 198 aaKnown RBP14.11□□□□□ -0.15
PTCH1-222ENST00000551425 RPS6P62753 249 aaKnown RBP14.11□□□□□ -0.15
PTCH1-222ENST00000551425 ARHGAP1Q07960 439 aa14.11□□□□□ -0.15
PTCH1-222ENST00000551425 SMAD4Q13485 552 aaKnown RBP14.11□□□□□ -0.15
PTCH1-222ENST00000551425 SUGP1Q8IWZ8 645 aaKnown RBP14.11□□□□□ -0.15
PTCH1-222ENST00000551425 C7orf31Q8N865 590 aa14.11□□□□□ -0.15
PTCH1-222ENST00000551425 DBF4BQ8NFT6 615 aa14.11□□□□□ -0.15
PTCH1-222ENST00000551425 BCL11AQ9H165 835 aa14.11□□□□□ -0.15
PTCH1-222ENST00000551425 IRF2BPLQ9H1B7 796 aa14.11□□□□□ -0.15
PTCH1-222ENST00000551425 PNMA2Q9UL42 364 aa14.11□□□□□ -0.15
PTCH1-222ENST00000551425 STX8Q9UNK0 236 aa14.11□□□□□ -0.15
PTCH1-222ENST00000551425 MYH7P12883 1935 aa14.11□□□□□ -0.15
PTCH1-222ENST00000551425 C5orf42Q9H799 3197 aa14.1□□□□□ -0.15
PTCH1-222ENST00000551425 PATL2C9JE40 543 aaKnown RBP14.1□□□□□ -0.15
PTCH1-222ENST00000551425 STXBP3O00186 592 aa14.1□□□□□ -0.15
PTCH1-222ENST00000551425 GH1P01241 217 aa14.1□□□□□ -0.15
PTCH1-222ENST00000551425 APPP05067 770 aa14.1□□□□□ -0.15
PTCH1-222ENST00000551425 SLC3A2P08195 630 aaKnown RBP14.1□□□□□ -0.15
PTCH1-222ENST00000551425 DLX2Q07687 328 aaPredicted RBP14.1□□□□□ -0.15
PTCH1-222ENST00000551425 RASGRP2Q7LDG7 609 aa14.1□□□□□ -0.15
PTCH1-222ENST00000551425 IFNL3Q8IZI9 196 aa14.1□□□□□ -0.15
PTCH1-222ENST00000551425 FBXL6Q8N531 539 aa14.1□□□□□ -0.15
PTCH1-222ENST00000551425 DCAF4Q8WV16 495 aa14.1□□□□□ -0.15
PTCH1-222ENST00000551425 WNT8BQ93098 351 aa14.1□□□□□ -0.15
PTCH1-222ENST00000551425 TOP1MTQ969P6 601 aa14.1□□□□□ -0.15
PTCH1-222ENST00000551425 YME1L1Q96TA2 773 aa14.1□□□□□ -0.15
PTCH1-222ENST00000551425 IL17RBQ9NRM6 502 aa14.1□□□□□ -0.15
PTCH1-222ENST00000551425 HAS3O00219 553 aa14.09□□□□□ -0.15
PTCH1-222ENST00000551425 HMMRO75330 724 aa14.09□□□□□ -0.15
PTCH1-222ENST00000551425 SLC16A2P36021 539 aa14.09□□□□□ -0.15
PTCH1-222ENST00000551425 NOVP48745 357 aa14.09□□□□□ -0.15
PTCH1-222ENST00000551425 PSEN2P49810 448 aa14.09□□□□□ -0.15
PTCH1-222ENST00000551425 HYAL1Q12794 435 aa14.09□□□□□ -0.15
PTCH1-222ENST00000551425 CLUL1Q15846 466 aa14.09□□□□□ -0.15
PTCH1-222ENST00000551425 DGKDQ16760 1214 aa14.09□□□□□ -0.15
PTCH1-222ENST00000551425 PLEKHG4Q58EX7 1191 aa14.09□□□□□ -0.15
PTCH1-222ENST00000551425 SYDE2Q5VT97 1194 aa14.09□□□□□ -0.15
PTCH1-222ENST00000551425 KBTBD3Q8NAB2 608 aa14.09□□□□□ -0.15
PTCH1-222ENST00000551425 KATNAL1Q9BW62 490 aa14.09□□□□□ -0.15
PTCH1-222ENST00000551425 LMAN2LQ9H0V9 348 aa14.09□□□□□ -0.15
PTCH1-222ENST00000551425 C5orf67F2Z3F1 127 aa14.08□□□□□ -0.16
PTCH1-222ENST00000551425 RBAK-RBAKDNI3L0D1 243 aa14.08□□□□□ -0.16
PTCH1-222ENST00000551425 RNF113AO15541 343 aaKnown RBP14.08□□□□□ -0.16
PTCH1-222ENST00000551425 F2P00734 622 aa14.08□□□□□ -0.16
PTCH1-222ENST00000551425 ZXDAP98168 799 aa14.08□□□□□ -0.16
PTCH1-222ENST00000551425 LY6KQ17RY6 165 aa14.08□□□□□ -0.16
PTCH1-222ENST00000551425 CCDC96Q2M329 555 aa14.08□□□□□ -0.16
PTCH1-222ENST00000551425 TTBK2Q6IQ55 1244 aa14.08□□□□□ -0.16
PTCH1-222ENST00000551425 SIRT2Q8IXJ6 389 aa14.08□□□□□ -0.16
PTCH1-222ENST00000551425 EMID1Q96A84 441 aaPredicted RBP14.08□□□□□ -0.16
PTCH1-222ENST00000551425 NACAP1Q9BZK3 213 aa14.08□□□□□ -0.16
PTCH1-222ENST00000551425 FAM86C1Q9NVL1 165 aa14.08□□□□□ -0.16
PTCH1-222ENST00000551425 CD207Q9UJ71 328 aa14.08□□□□□ -0.16
PTCH1-222ENST00000551425 SPTBN4Q9H254 2564 aa14.07□□□□□ -0.16
PTCH1-222ENST00000551425 RSPH10B2B2RC85 870 aa14.07□□□□□ -0.16
PTCH1-222ENST00000551425 LOC730098B7Z3J9 87 aa14.07□□□□□ -0.16
PTCH1-222ENST00000551425 M0R2C6 588 aa14.07□□□□□ -0.16
PTCH1-222ENST00000551425 NMT2O60551 498 aa14.07□□□□□ -0.16
PTCH1-222ENST00000551425 TBX10O75333 385 aa14.07□□□□□ -0.16
PTCH1-222ENST00000551425 RB1P06400 928 aa14.07□□□□□ -0.16
PTCH1-222ENST00000551425 ZFYP08048 801 aaPredicted RBP14.07□□□□□ -0.16
PTCH1-222ENST00000551425 RSPH10BP0C881 870 aa14.07□□□□□ -0.16
PTCH1-222ENST00000551425 PPARAQ07869 468 aa14.07□□□□□ -0.16
PTCH1-222ENST00000551425 MFSD10Q14728 455 aa14.07□□□□□ -0.16
PTCH1-222ENST00000551425 KIAA0753Q2KHM9 967 aa14.07□□□□□ -0.16
PTCH1-222ENST00000551425 RGS22Q8NE09 1264 aa14.07□□□□□ -0.16
PTCH1-222ENST00000551425 ALG1Q9BT22 464 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms