RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 ZSCAN10Q96SZ4 725 aaPredicted RBP17.31■□□□□ 0.36
TMEM106C-216ENST00000551305 RMDN3Q96TC7 470 aa17.31■□□□□ 0.36
TMEM106C-216ENST00000551305 HDAC6Q9UBN7 1215 aa17.31■□□□□ 0.36
TMEM106C-216ENST00000551305 DDX41Q9UJV9 622 aaKnown RBP17.31■□□□□ 0.36
TMEM106C-216ENST00000551305 TRIP12Q14669 1992 aaPredicted RBP17.31■□□□□ 0.36
TMEM106C-216ENST00000551305 TLL1O43897 1013 aa17.3■□□□□ 0.36
TMEM106C-216ENST00000551305 DHX16O60231 1041 aaKnown RBP17.3■□□□□ 0.36
TMEM106C-216ENST00000551305 CASTP20810 708 aaKnown RBP17.3■□□□□ 0.36
TMEM106C-216ENST00000551305 GRB10Q13322 594 aa17.3■□□□□ 0.36
TMEM106C-216ENST00000551305 ARHGEF16Q5VV41 709 aa17.3■□□□□ 0.36
TMEM106C-216ENST00000551305 SESTD1Q86VW0 696 aa17.3■□□□□ 0.36
TMEM106C-216ENST00000551305 IQCA1Q86XH1 822 aa17.3■□□□□ 0.36
TMEM106C-216ENST00000551305 PLEKHM2Q8IWE5 1019 aa17.3■□□□□ 0.36
TMEM106C-216ENST00000551305 ENAHQ8N8S7 591 aaPredicted RBP17.3■□□□□ 0.36
TMEM106C-216ENST00000551305 CAGE1Q8TC20 777 aa17.3■□□□□ 0.36
TMEM106C-216ENST00000551305 ALG1Q9BT22 464 aa17.3■□□□□ 0.36
TMEM106C-216ENST00000551305 JMJD4Q9H9V9 463 aa17.3■□□□□ 0.36
TMEM106C-216ENST00000551305 ZSWIM5Q9P217 1185 aa17.3■□□□□ 0.36
TMEM106C-216ENST00000551305 PRRC2BQ5JSZ5 2229 aaKnown RBP17.3■□□□□ 0.36
TMEM106C-216ENST00000551305 TANC1Q9C0D5 1861 aa17.3■□□□□ 0.36
TMEM106C-216ENST00000551305 SORBS3O60504 671 aa17.29■□□□□ 0.36
TMEM106C-216ENST00000551305 LPXNO60711 386 aa17.29■□□□□ 0.36
TMEM106C-216ENST00000551305 NBNO60934 754 aa17.29■□□□□ 0.36
TMEM106C-216ENST00000551305 BAIAP3O94812 1187 aa17.29■□□□□ 0.36
TMEM106C-216ENST00000551305 SELPP16109 830 aa17.29■□□□□ 0.36
TMEM106C-216ENST00000551305 KCNJ6P48051 423 aa17.29■□□□□ 0.36
TMEM106C-216ENST00000551305 MFAP1P55081 439 aaKnown RBP17.29■□□□□ 0.36
TMEM106C-216ENST00000551305 WDR5P61964 334 aaKnown RBP17.29■□□□□ 0.36
TMEM106C-216ENST00000551305 DEFB103AP81534 67 aa17.29■□□□□ 0.36
TMEM106C-216ENST00000551305 ASPRV1Q53RT3 343 aa17.29■□□□□ 0.36
TMEM106C-216ENST00000551305 LRRC8DQ7L1W4 858 aa17.29■□□□□ 0.36
TMEM106C-216ENST00000551305 FBXO11Q86XK2 927 aa17.29■□□□□ 0.36
TMEM106C-216ENST00000551305 MCF2L2Q86YR7 1114 aa17.29■□□□□ 0.36
TMEM106C-216ENST00000551305 AFAP1L1Q8TED9 768 aa17.29■□□□□ 0.36
TMEM106C-216ENST00000551305 IWS1Q96ST2 819 aa17.29■□□□□ 0.36
TMEM106C-216ENST00000551305 GTF2IRD1Q9UHL9 959 aa17.29■□□□□ 0.36
TMEM106C-216ENST00000551305 MRPL11Q9Y3B7 192 aaKnown RBP17.29■□□□□ 0.36
TMEM106C-216ENST00000551305 REV3LO60673 3130 aa17.29■□□□□ 0.36
TMEM106C-216ENST00000551305 CFBP00751 764 aa17.28■□□□□ 0.36
TMEM106C-216ENST00000551305 NR3C2P08235 984 aa17.28■□□□□ 0.36
TMEM106C-216ENST00000551305 PARP1P09874 1014 aaKnown RBP17.28■□□□□ 0.36
TMEM106C-216ENST00000551305 CKBP12277 381 aa17.28■□□□□ 0.36
TMEM106C-216ENST00000551305 PSEN2P49810 448 aa17.28■□□□□ 0.36
TMEM106C-216ENST00000551305 ZNF200P98182 395 aaPredicted RBP17.28■□□□□ 0.36
TMEM106C-216ENST00000551305 DGKDQ16760 1214 aa17.28■□□□□ 0.36
TMEM106C-216ENST00000551305 AAK1Q2M2I8 961 aa17.28■□□□□ 0.36
TMEM106C-216ENST00000551305 CCDC178Q5BJE1 867 aa17.28■□□□□ 0.36
TMEM106C-216ENST00000551305 STAG2Q8N3U4 1231 aa17.28■□□□□ 0.36
TMEM106C-216ENST00000551305 CCDC155Q8N6L0 562 aa17.28■□□□□ 0.36
TMEM106C-216ENST00000551305 WNT8BQ93098 351 aa17.28■□□□□ 0.36
TMEM106C-216ENST00000551305 OPLAHO14841 1288 aa17.28■□□□□ 0.36
TMEM106C-216ENST00000551305 EIF3JO75822 258 aaKnown RBP17.28■□□□□ 0.36
TMEM106C-216ENST00000551305 IGHDP01880 384 aa17.28■□□□□ 0.36
TMEM106C-216ENST00000551305 ZNF286BP0CG31 522 aa17.28■□□□□ 0.36
TMEM106C-216ENST00000551305 CHD1LQ86WJ1 897 aa17.28■□□□□ 0.36
TMEM106C-216ENST00000551305 SMC5Q8IY18 1101 aa17.28■□□□□ 0.36
TMEM106C-216ENST00000551305 C7orf31Q8N865 590 aa17.28■□□□□ 0.36
TMEM106C-216ENST00000551305 ZBED2Q9BTP6 218 aa17.28■□□□□ 0.36
TMEM106C-216ENST00000551305 MAF1Q9H063 256 aa17.28■□□□□ 0.36
TMEM106C-216ENST00000551305 PXMP2Q9NR77 195 aa17.28■□□□□ 0.36
TMEM106C-216ENST00000551305 DIAPH3Q9NSV4 1193 aa17.28■□□□□ 0.36
TMEM106C-216ENST00000551305 MRVI1Q9Y6F6 885 aa17.28■□□□□ 0.36
TMEM106C-216ENST00000551305 PTPRSQ13332 1948 aa17.27■□□□□ 0.36
TMEM106C-216ENST00000551305 CXCL10P02778 98 aa17.27■□□□□ 0.35
TMEM106C-216ENST00000551305 MYCLP12524 364 aaPredicted RBP17.27■□□□□ 0.35
TMEM106C-216ENST00000551305 HIC1Q14526 733 aa17.27■□□□□ 0.35
TMEM106C-216ENST00000551305 MFSD10Q14728 455 aa17.27■□□□□ 0.35
TMEM106C-216ENST00000551305 CNKSR3Q6P9H4 555 aa17.27■□□□□ 0.35
TMEM106C-216ENST00000551305 GDPD5Q8WTR4 605 aa17.27■□□□□ 0.35
TMEM106C-216ENST00000551305 ZFP91Q96JP5 570 aaPredicted RBP17.27■□□□□ 0.35
TMEM106C-216ENST00000551305 OSBPL3Q9H4L5 887 aa17.27■□□□□ 0.35
TMEM106C-216ENST00000551305 HAS3O00219 553 aa17.26■□□□□ 0.35
TMEM106C-216ENST00000551305 PPP1R11O60927 126 aaPredicted RBP17.26■□□□□ 0.35
TMEM106C-216ENST00000551305 RGS20O76081 388 aa17.26■□□□□ 0.35
TMEM106C-216ENST00000551305 RBL2Q08999 1139 aa17.26■□□□□ 0.35
TMEM106C-216ENST00000551305 LAMC2Q13753 1193 aa17.26■□□□□ 0.35
TMEM106C-216ENST00000551305 KIAA0753Q2KHM9 967 aa17.26■□□□□ 0.35
TMEM106C-216ENST00000551305 TRIM71Q2Q1W2 868 aaKnown RBP17.26■□□□□ 0.35
TMEM106C-216ENST00000551305 ZNF618Q5T7W0 954 aa17.26■□□□□ 0.35
TMEM106C-216ENST00000551305 FAM117BQ6P1L5 589 aa17.26■□□□□ 0.35
TMEM106C-216ENST00000551305 TRAF7Q6Q0C0 670 aa17.26■□□□□ 0.35
TMEM106C-216ENST00000551305 DHX37Q8IY37 1157 aaKnown RBP17.26■□□□□ 0.35
TMEM106C-216ENST00000551305 PPTC7Q8NI37 304 aa17.26■□□□□ 0.35
TMEM106C-216ENST00000551305 EMID1Q96A84 441 aaPredicted RBP17.26■□□□□ 0.35
TMEM106C-216ENST00000551305 RWDD1Q9H446 243 aaPredicted RBP17.26■□□□□ 0.35
TMEM106C-216ENST00000551305 MTUS1Q9ULD2 1270 aa17.26■□□□□ 0.35
TMEM106C-216ENST00000551305 COG5Q9UP83 839 aa17.26■□□□□ 0.35
TMEM106C-216ENST00000551305 XIRP2A4UGR9 3374 aa17.25■□□□□ 0.35
TMEM106C-216ENST00000551305 F2P00734 622 aa17.25■□□□□ 0.35
TMEM106C-216ENST00000551305 HSD17B4P51659 736 aa17.25■□□□□ 0.35
TMEM106C-216ENST00000551305 MBTPS1Q14703 1052 aa17.25■□□□□ 0.35
TMEM106C-216ENST00000551305 IMMTQ16891 758 aaKnown RBP17.25■□□□□ 0.35
TMEM106C-216ENST00000551305 HLA-CQ95604 372 aa17.25■□□□□ 0.35
TMEM106C-216ENST00000551305 DSCC1Q9BVC3 393 aa17.25■□□□□ 0.35
TMEM106C-216ENST00000551305 AMNQ9BXJ7 453 aa17.25■□□□□ 0.35
TMEM106C-216ENST00000551305 IL25Q9H293 177 aa17.25■□□□□ 0.35
TMEM106C-216ENST00000551305 EPHX3Q9H6B9 360 aa17.25■□□□□ 0.35
TMEM106C-216ENST00000551305 KIAA1217Q5T5P2 1943 aa17.25■□□□□ 0.35
TMEM106C-216ENST00000551305 GJB5O95377 273 aa17.24■□□□□ 0.35
TMEM106C-216ENST00000551305 HOXA13P31271 388 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms