RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 XRCC4Q13426 336 aa13.49□□□□□ -0.25
ERBB3-219ENST00000551242 PPP1R7Q15435 360 aa13.49□□□□□ -0.25
ERBB3-219ENST00000551242 HLFQ16534 295 aa13.49□□□□□ -0.25
ERBB3-219ENST00000551242 PTPROQ16827 1216 aa13.49□□□□□ -0.25
ERBB3-219ENST00000551242 TDRD12Q587J7 1177 aaKnown RBP13.49□□□□□ -0.25
ERBB3-219ENST00000551242 FIGNQ5HY92 759 aa13.49□□□□□ -0.25
ERBB3-219ENST00000551242 TOM1L2Q6ZVM7 507 aa13.49□□□□□ -0.25
ERBB3-219ENST00000551242 CPLX4Q7Z7G2 160 aa13.49□□□□□ -0.25
ERBB3-219ENST00000551242 ZSCAN29Q8IWY8 852 aaPredicted RBP13.49□□□□□ -0.25
ERBB3-219ENST00000551242 CCDC155Q8N6L0 562 aa13.49□□□□□ -0.25
ERBB3-219ENST00000551242 NOD2Q9HC29 1040 aa13.49□□□□□ -0.25
ERBB3-219ENST00000551242 PLCB1Q9NQ66 1216 aa13.49□□□□□ -0.25
ERBB3-219ENST00000551242 SIK3Q9Y2K2 1263 aa13.49□□□□□ -0.25
ERBB3-219ENST00000551242 NFS1Q9Y697 457 aa13.49□□□□□ -0.25
ERBB3-219ENST00000551242 MGRN1O60291 552 aa13.49□□□□□ -0.25
ERBB3-219ENST00000551242 ATP6V1G2O95670 118 aa13.49□□□□□ -0.25
ERBB3-219ENST00000551242 CDC25CP30307 473 aa13.49□□□□□ -0.25
ERBB3-219ENST00000551242 UBA7P41226 1012 aa13.49□□□□□ -0.25
ERBB3-219ENST00000551242 MYO1EQ12965 1108 aa13.49□□□□□ -0.25
ERBB3-219ENST00000551242 MSL1Q68DK7 614 aa13.49□□□□□ -0.25
ERBB3-219ENST00000551242 MAGEC3Q8TD91 643 aa13.49□□□□□ -0.25
ERBB3-219ENST00000551242 CCT6BQ92526 530 aa13.49□□□□□ -0.25
ERBB3-219ENST00000551242 ESR2Q92731 530 aa13.49□□□□□ -0.25
ERBB3-219ENST00000551242 ZSCAN10Q96SZ4 725 aaPredicted RBP13.49□□□□□ -0.25
ERBB3-219ENST00000551242 TMEM60Q9H2L4 133 aa13.49□□□□□ -0.25
ERBB3-219ENST00000551242 RNF41Q9H4P4 317 aaPredicted RBP13.49□□□□□ -0.25
ERBB3-219ENST00000551242 KIF1AQ12756 1690 aa13.49□□□□□ -0.25
ERBB3-219ENST00000551242 NUP188Q5SRE5 1749 aa13.49□□□□□ -0.25
ERBB3-219ENST00000551242 SRRM3A6NNA2 597 aaPredicted RBP13.49□□□□□ -0.25
ERBB3-219ENST00000551242 FLT3P36888 993 aa13.49□□□□□ -0.25
ERBB3-219ENST00000551242 TROAPQ12815 778 aa13.49□□□□□ -0.25
ERBB3-219ENST00000551242 GKAP1Q5VSY0 366 aaPredicted RBP13.49□□□□□ -0.25
ERBB3-219ENST00000551242 C1orf131Q8NDD1 294 aaKnown RBP13.49□□□□□ -0.25
ERBB3-219ENST00000551242 MDM1Q8TC05 714 aa13.49□□□□□ -0.25
ERBB3-219ENST00000551242 TATDN2Q93075 761 aa13.49□□□□□ -0.25
ERBB3-219ENST00000551242 NEUROG2Q9H2A3 272 aa13.49□□□□□ -0.25
ERBB3-219ENST00000551242 TAF1DQ9H5J8 278 aaPredicted RBP13.49□□□□□ -0.25
ERBB3-219ENST00000551242 KBTBD4Q9NVX7 518 aa13.49□□□□□ -0.25
ERBB3-219ENST00000551242 FAM205AQ6ZU69 1335 aa13.48□□□□□ -0.25
ERBB3-219ENST00000551242 LMTK3Q96Q04 1460 aa13.48□□□□□ -0.25
ERBB3-219ENST00000551242 PJA2O43164 708 aa13.48□□□□□ -0.25
ERBB3-219ENST00000551242 BUB1BO60566 1050 aaPredicted RBP13.48□□□□□ -0.25
ERBB3-219ENST00000551242 UQCRFS1P1P0C7P4 283 aa13.48□□□□□ -0.25
ERBB3-219ENST00000551242 ECHS1P30084 290 aa13.48□□□□□ -0.25
ERBB3-219ENST00000551242 PPP2R2AP63151 447 aa13.48□□□□□ -0.25
ERBB3-219ENST00000551242 TMTC3Q6ZXV5 915 aa13.48□□□□□ -0.25
ERBB3-219ENST00000551242 FAM114A1Q8IWE2 563 aa13.48□□□□□ -0.25
ERBB3-219ENST00000551242 NSMCE1Q8WV22 266 aa13.48□□□□□ -0.25
ERBB3-219ENST00000551242 UBLCP1Q8WVY7 318 aaPredicted RBP13.48□□□□□ -0.25
ERBB3-219ENST00000551242 TCP11Q8WWU5 503 aa13.48□□□□□ -0.25
ERBB3-219ENST00000551242 NDST4Q9H3R1 872 aa13.48□□□□□ -0.25
ERBB3-219ENST00000551242 NLRC4Q9NPP4 1024 aa13.48□□□□□ -0.25
ERBB3-219ENST00000551242 L3MBTL1Q9Y468 752 aa13.48□□□□□ -0.25
ERBB3-219ENST00000551242 NMT2O60551 498 aa13.48□□□□□ -0.25
ERBB3-219ENST00000551242 MAGOHP61326 146 aaKnown RBP13.48□□□□□ -0.25
ERBB3-219ENST00000551242 ASIC1P78348 528 aa13.48□□□□□ -0.25
ERBB3-219ENST00000551242 ENOX2Q16206 610 aaKnown RBP13.48□□□□□ -0.25
ERBB3-219ENST00000551242 DTHD1Q6ZMT9 781 aa13.48□□□□□ -0.25
ERBB3-219ENST00000551242 ZBTB38Q8NAP3 1195 aaPredicted RBP13.48□□□□□ -0.25
ERBB3-219ENST00000551242 MAGOHBQ96A72 148 aaKnown RBP13.48□□□□□ -0.25
ERBB3-219ENST00000551242 INPP4AQ96PE3 977 aaPredicted RBP13.48□□□□□ -0.25
ERBB3-219ENST00000551242 GOLPH3Q9H4A6 298 aa13.48□□□□□ -0.25
ERBB3-219ENST00000551242 CNTNAP5Q8WYK1 1306 aa13.48□□□□□ -0.25
ERBB3-219ENST00000551242 ZNF142P52746 1687 aaPredicted RBP13.48□□□□□ -0.25
ERBB3-219ENST00000551242 CAMTA1Q9Y6Y1 1673 aa13.48□□□□□ -0.25
ERBB3-219ENST00000551242 GLI3P10071 1580 aa13.47□□□□□ -0.25
ERBB3-219ENST00000551242 C1orf167Q5SNV9 1468 aa13.47□□□□□ -0.25
ERBB3-219ENST00000551242 BICDL2A1A5D9 508 aa13.47□□□□□ -0.25
ERBB3-219ENST00000551242 F8W031 263 aaPredicted RBP13.47□□□□□ -0.25
ERBB3-219ENST00000551242 CLTAP09496 248 aa13.47□□□□□ -0.25
ERBB3-219ENST00000551242 KLRC1P26715 233 aa13.47□□□□□ -0.25
ERBB3-219ENST00000551242 ASTE1Q2TB18 679 aaPredicted RBP13.47□□□□□ -0.25
ERBB3-219ENST00000551242 VWA3BQ502W6 1294 aa13.47□□□□□ -0.25
ERBB3-219ENST00000551242 LACTB2Q53H82 288 aaPredicted RBP13.47□□□□□ -0.25
ERBB3-219ENST00000551242 ARL6IP4Q66PJ3 421 aaKnown RBP13.47□□□□□ -0.25
ERBB3-219ENST00000551242 PNMA8AQ86V59 439 aaPredicted RBP13.47□□□□□ -0.25
ERBB3-219ENST00000551242 BAP1Q92560 729 aa13.47□□□□□ -0.25
ERBB3-219ENST00000551242 SEMA6BQ9H3T3 888 aa13.47□□□□□ -0.25
ERBB3-219ENST00000551242 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.47□□□□□ -0.253e-8■□□□□ 9
ERBB3-219ENST00000551242 FBXL5Q9UKA1 691 aa13.47□□□□□ -0.25
ERBB3-219ENST00000551242 SCG2P13521 617 aa13.47□□□□□ -0.25
ERBB3-219ENST00000551242 TRAPPC10P48553 1259 aa13.47□□□□□ -0.25
ERBB3-219ENST00000551242 PPP2R5BQ15173 497 aa13.47□□□□□ -0.25
ERBB3-219ENST00000551242 ADGRA1Q86SQ6 560 aa13.47□□□□□ -0.25
ERBB3-219ENST00000551242 GPKOWQ92917 476 aaPredicted RBP eCLIP13.47□□□□□ -0.25
ERBB3-219ENST00000551242 CUL5Q93034 780 aa13.47□□□□□ -0.25
ERBB3-219ENST00000551242 SLC39A2Q9NP94 309 aa13.47□□□□□ -0.25
ERBB3-219ENST00000551242 RNF14Q9UBS8 474 aa13.47□□□□□ -0.25
ERBB3-219ENST00000551242 C5orf60A6NFR6 353 aa13.46□□□□□ -0.25
ERBB3-219ENST00000551242 PLCG1P19174 1290 aa13.46□□□□□ -0.25
ERBB3-219ENST00000551242 GCKP35557 465 aa13.46□□□□□ -0.25
ERBB3-219ENST00000551242 PEX19P40855 299 aa13.46□□□□□ -0.25
ERBB3-219ENST00000551242 IFFO1Q0D2I5 559 aa13.46□□□□□ -0.25
ERBB3-219ENST00000551242 BIRC2Q13490 618 aa13.46□□□□□ -0.25
ERBB3-219ENST00000551242 LRIG3Q6UXM1 1119 aa13.46□□□□□ -0.25
ERBB3-219ENST00000551242 CACNA2D4Q7Z3S7 1137 aa13.46□□□□□ -0.25
ERBB3-219ENST00000551242 USP38Q8NB14 1042 aa13.46□□□□□ -0.25
ERBB3-219ENST00000551242 RSRC1Q96IZ7 334 aaKnown RBP13.46□□□□□ -0.25
ERBB3-219ENST00000551242 AP1M1Q9BXS5 423 aa13.46□□□□□ -0.25
ERBB3-219ENST00000551242 ISCUQ9H1K1 167 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms