RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 ZNF655Q8N720 491 aaPredicted RBP6.86□□□□□ -1.31
SCAF11-214ENST00000550893 PDZD8Q8NEN9 1154 aa6.86□□□□□ -1.31
SCAF11-214ENST00000550893 DHX38Q92620 1227 aaKnown RBP6.86□□□□□ -1.31
SCAF11-214ENST00000550893 TCTN2Q96GX1 697 aa6.86□□□□□ -1.31
SCAF11-214ENST00000550893 MKRN2Q9H000 416 aaKnown RBP6.86□□□□□ -1.31
SCAF11-214ENST00000550893 MINPP1Q9UNW1 487 aa6.86□□□□□ -1.31
SCAF11-214ENST00000550893 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.86□□□□□ -1.31
SCAF11-214ENST00000550893 ZNF281Q9Y2X9 895 aa6.86□□□□□ -1.31
SCAF11-214ENST00000550893 QSER1Q2KHR3 1735 aa6.86□□□□□ -1.31
SCAF11-214ENST00000550893 MEGF6O75095 1541 aa6.86□□□□□ -1.31
SCAF11-214ENST00000550893 TNS2Q63HR2 1409 aa6.85□□□□□ -1.31
SCAF11-214ENST00000550893 TAF1LQ8IZX4 1826 aa6.85□□□□□ -1.31
SCAF11-214ENST00000550893 TTC21AQ8NDW8 1320 aa6.85□□□□□ -1.31
SCAF11-214ENST00000550893 SIGLEC6O43699 453 aa6.85□□□□□ -1.31
SCAF11-214ENST00000550893 MPZL3Q6UWV2 235 aa6.85□□□□□ -1.31
SCAF11-214ENST00000550893 CCDC81Q6ZN84 652 aa6.85□□□□□ -1.31
SCAF11-214ENST00000550893 RUFY4Q6ZNE9 571 aa6.85□□□□□ -1.31
SCAF11-214ENST00000550893 PRR23BQ6ZRT6 265 aa6.85□□□□□ -1.31
SCAF11-214ENST00000550893 PTF1AQ7RTS3 328 aa6.85□□□□□ -1.31
SCAF11-214ENST00000550893 TAB3Q8N5C8 712 aaPredicted RBP6.85□□□□□ -1.31
SCAF11-214ENST00000550893 RBBP8NLQ8NC74 664 aaPredicted RBP6.85□□□□□ -1.31
SCAF11-214ENST00000550893 SYTL4Q96C24 671 aaPredicted RBP6.85□□□□□ -1.31
SCAF11-214ENST00000550893 PUS7Q96PZ0 661 aaKnown RBP6.85□□□□□ -1.31
SCAF11-214ENST00000550893 TM9SF2Q99805 663 aa6.85□□□□□ -1.31
SCAF11-214ENST00000550893 PCGF6Q9BYE7 350 aa6.85□□□□□ -1.31
SCAF11-214ENST00000550893 FOXP3Q9BZS1 431 aa6.85□□□□□ -1.31
SCAF11-214ENST00000550893 PRDM11Q9NQV5 511 aa6.85□□□□□ -1.31
SCAF11-214ENST00000550893 SUCOQ9UBS9 1254 aaKnown RBP6.85□□□□□ -1.31
SCAF11-214ENST00000550893 EFR3BQ9Y2G0 817 aa6.85□□□□□ -1.31
SCAF11-214ENST00000550893 UTRNP46939 3433 aa6.85□□□□□ -1.31
SCAF11-214ENST00000550893 BCL9O00512 1426 aa6.84□□□□□ -1.31
SCAF11-214ENST00000550893 SMG6Q86US8 1419 aaKnown RBP6.84□□□□□ -1.31
SCAF11-214ENST00000550893 NINLQ9Y2I6 1382 aa6.84□□□□□ -1.31
SCAF11-214ENST00000550893 C9IYK1 514 aa6.84□□□□□ -1.31
SCAF11-214ENST00000550893 FBLN1P23142 703 aa6.84□□□□□ -1.31
SCAF11-214ENST00000550893 MESP2Q0VG99 397 aa6.84□□□□□ -1.31
SCAF11-214ENST00000550893 AUHQ13825 339 aaKnown RBP6.84□□□□□ -1.31
SCAF11-214ENST00000550893 COL9A2Q14055 689 aaPredicted RBP6.84□□□□□ -1.31
SCAF11-214ENST00000550893 ZYXQ15942 572 aaKnown RBP6.84□□□□□ -1.31
SCAF11-214ENST00000550893 RNF111Q6ZNA4 994 aa6.84□□□□□ -1.31
SCAF11-214ENST00000550893 LSRQ86X29 649 aaPredicted RBP6.84□□□□□ -1.31
SCAF11-214ENST00000550893 OXR1Q8N573 874 aa6.84□□□□□ -1.31
SCAF11-214ENST00000550893 DHRS1Q96LJ7 313 aa6.84□□□□□ -1.31
SCAF11-214ENST00000550893 GFOD1Q9NXC2 390 aa6.84□□□□□ -1.31
SCAF11-214ENST00000550893 FBXL21Q9UKT6 434 aa6.84□□□□□ -1.31
SCAF11-214ENST00000550893 TCFL5Q9UL49 500 aa6.84□□□□□ -1.31
SCAF11-214ENST00000550893 GOLGB1Q14789 3259 aaKnown RBP6.84□□□□□ -1.32
SCAF11-214ENST00000550893 FITM1A5D6W6 292 aa6.83□□□□□ -1.32
SCAF11-214ENST00000550893 RPL10P27635 214 aaKnown RBP6.83□□□□□ -1.32
SCAF11-214ENST00000550893 SOX9P48436 509 aa6.83□□□□□ -1.32
SCAF11-214ENST00000550893 PMS1P54277 932 aaKnown RBP6.83□□□□□ -1.32
SCAF11-214ENST00000550893 PCBP3P57721 371 aaKnown RBP6.83□□□□□ -1.32
SCAF11-214ENST00000550893 TIGD5Q53EQ6 642 aa6.83□□□□□ -1.32
SCAF11-214ENST00000550893 UNC5AQ6ZN44 842 aa6.83□□□□□ -1.32
SCAF11-214ENST00000550893 DEFB132Q7Z7B7 95 aa6.83□□□□□ -1.32
SCAF11-214ENST00000550893 LINC00116Q8NCU8 138 aa6.83□□□□□ -1.32
SCAF11-214ENST00000550893 RASGRP4Q8TDF6 673 aa6.83□□□□□ -1.32
SCAF11-214ENST00000550893 LINC01599Q8WXQ3 324 aa6.83□□□□□ -1.32
SCAF11-214ENST00000550893 GPRASP2Q96D09 838 aa6.83□□□□□ -1.32
SCAF11-214ENST00000550893 G6PC3Q9BUM1 346 aa6.83□□□□□ -1.32
SCAF11-214ENST00000550893 CHST7Q9NS84 486 aa6.83□□□□□ -1.32
SCAF11-214ENST00000550893 PCDHB12Q9Y5F1 795 aa6.83□□□□□ -1.32
SCAF11-214ENST00000550893 NSD3Q9BZ95 1437 aa6.83□□□□□ -1.32
SCAF11-214ENST00000550893 NSD2O96028 1365 aa6.82□□□□□ -1.32
SCAF11-214ENST00000550893 WDR17Q8IZU2 1322 aa6.82□□□□□ -1.32
SCAF11-214ENST00000550893 ADAMTS7Q9UKP4 1686 aa6.82□□□□□ -1.32
SCAF11-214ENST00000550893 TMEM82A0PJX8 343 aa6.82□□□□□ -1.32
SCAF11-214ENST00000550893 MEIS1O00470 390 aa6.82□□□□□ -1.32
SCAF11-214ENST00000550893 SYPP08247 313 aa6.82□□□□□ -1.32
SCAF11-214ENST00000550893 GUCY2CP25092 1073 aa6.82□□□□□ -1.32
SCAF11-214ENST00000550893 DUSP4Q13115 394 aa6.82□□□□□ -1.32
SCAF11-214ENST00000550893 NR0B2Q15466 257 aa6.82□□□□□ -1.32
SCAF11-214ENST00000550893 ZNF124Q15973 351 aa6.82□□□□□ -1.32
SCAF11-214ENST00000550893 BBS9Q3SYG4 887 aa6.82□□□□□ -1.32
SCAF11-214ENST00000550893 TDRD10Q5VZ19 366 aaKnown RBP6.82□□□□□ -1.32
SCAF11-214ENST00000550893 PPFIBP1Q86W92 1011 aa6.82□□□□□ -1.32
SCAF11-214ENST00000550893 LILRA2Q8N149 483 aa6.82□□□□□ -1.32
SCAF11-214ENST00000550893 FAM84AQ96KN4 292 aa6.82□□□□□ -1.32
SCAF11-214ENST00000550893 SPATA32Q96LK8 384 aa6.82□□□□□ -1.32
SCAF11-214ENST00000550893 DIRC2Q96SL1 478 aa6.82□□□□□ -1.32
SCAF11-214ENST00000550893 RNF32Q9H0A6 362 aa6.82□□□□□ -1.32
SCAF11-214ENST00000550893 CCDC9Q9Y3X0 531 aaKnown RBP6.82□□□□□ -1.32
SCAF11-214ENST00000550893 COL3A1P02461 1466 aaPredicted RBP6.81□□□□□ -1.32
SCAF11-214ENST00000550893 SSU72P8A0A1W2PR75 194 aa6.81□□□□□ -1.32
SCAF11-214ENST00000550893 SHOXO15266 292 aa6.81□□□□□ -1.32
SCAF11-214ENST00000550893 FKTNO75072 461 aa6.81□□□□□ -1.32
SCAF11-214ENST00000550893 CTSKP43235 329 aa6.81□□□□□ -1.32
SCAF11-214ENST00000550893 GJA8P48165 433 aa6.81□□□□□ -1.32
SCAF11-214ENST00000550893 ZPBP2Q6X784 338 aa6.81□□□□□ -1.32
SCAF11-214ENST00000550893 KRT27Q7Z3Y8 459 aa6.81□□□□□ -1.32
SCAF11-214ENST00000550893 SPPL2CQ8IUH8 684 aa6.81□□□□□ -1.32
SCAF11-214ENST00000550893 KSR1Q8IVT5 923 aa6.81□□□□□ -1.32
SCAF11-214ENST00000550893 CCDC144CPQ8IYA2 1237 aa6.81□□□□□ -1.32
SCAF11-214ENST00000550893 C7orf61Q8IZ16 206 aa6.81□□□□□ -1.32
SCAF11-214ENST00000550893 ANKS4BQ8N8V4 417 aa6.81□□□□□ -1.32
SCAF11-214ENST00000550893 CRBNQ96SW2 442 aa6.81□□□□□ -1.32
SCAF11-214ENST00000550893 ACBD3Q9H3P7 528 aa6.81□□□□□ -1.32
SCAF11-214ENST00000550893 NSUN3Q9H649 340 aaKnown RBP6.81□□□□□ -1.32
SCAF11-214ENST00000550893 KCNK12Q9HB15 430 aa6.81□□□□□ -1.32
SCAF11-214ENST00000550893 ZMYM5Q9UJ78 669 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms