RNA–Protein interactions for RNA: ENST00000550442.5

LETMD1-223, Transcript of LETM1 domain containing 1, human

TSL 4

Gene LETMD1, Length 469 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-223	ENST00000550442	PBX1	P40424	430 aa		13.23	□□□□□ -0.29
LETMD1-223	ENST00000550442	CRK	P46108	304 aa		13.23	□□□□□ -0.29
LETMD1-223	ENST00000550442	CRHR2	Q13324	411 aa		13.23	□□□□□ -0.29
LETMD1-223	ENST00000550442	GRIK5	Q16478	980 aa		13.23	□□□□□ -0.29
LETMD1-223	ENST00000550442	TSR1	Q2NL82	804 aa	Known RBP	13.23	□□□□□ -0.29
LETMD1-223	ENST00000550442	LDLRAD1	Q5T700	205 aa		13.23	□□□□□ -0.29
LETMD1-223	ENST00000550442	E4F1	Q66K89	784 aa	Predicted RBP	13.23	□□□□□ -0.29
LETMD1-223	ENST00000550442	CDC42EP5	Q6NZY7	148 aa		13.23	□□□□□ -0.29
LETMD1-223	ENST00000550442	TATDN1	Q6P1N9	297 aa		13.23	□□□□□ -0.29
LETMD1-223	ENST00000550442	SV2B	Q7L1I2	683 aa		13.23	□□□□□ -0.29
LETMD1-223	ENST00000550442	ADSSL1	Q8N142	457 aa		13.23	□□□□□ -0.29
LETMD1-223	ENST00000550442	GMCL1P1	Q8NEA9	526 aa		13.23	□□□□□ -0.29
LETMD1-223	ENST00000550442	MTMR9	Q96QG7	549 aa		13.23	□□□□□ -0.29
LETMD1-223	ENST00000550442	CGN	Q9P2M7	1197 aa	Known RBP	13.23	□□□□□ -0.29
LETMD1-223	ENST00000550442	HERC5	Q9UII4	1024 aa	Known RBP	13.23	□□□□□ -0.29
LETMD1-223	ENST00000550442	PTCH2	Q9Y6C5	1203 aa		13.23	□□□□□ -0.29
LETMD1-223	ENST00000550442	CDK5RAP2	Q96SN8	1893 aa		13.23	□□□□□ -0.29
LETMD1-223	ENST00000550442	CYP3A7-CYP3A51P	A0A087WV96	503 aa		13.22	□□□□□ -0.29
LETMD1-223	ENST00000550442	hCG_1642624	A0A1W2PR95	340 aa		13.22	□□□□□ -0.29
LETMD1-223	ENST00000550442	CCNT1	O60563	726 aa	Known RBP	13.22	□□□□□ -0.29
LETMD1-223	ENST00000550442	SLU7	O95391	586 aa	Known RBP	13.22	□□□□□ -0.29
LETMD1-223	ENST00000550442	TUBB	P07437	444 aa		13.22	□□□□□ -0.29
LETMD1-223	ENST00000550442	CYP3A7	P24462	503 aa		13.22	□□□□□ -0.29
LETMD1-223	ENST00000550442	DNM2	P50570	870 aa		13.22	□□□□□ -0.29
LETMD1-223	ENST00000550442	INF2	Q27J81	1249 aa		13.22	□□□□□ -0.29
LETMD1-223	ENST00000550442	NBPF9	Q3BBW0	867 aa		13.22	□□□□□ -0.29
LETMD1-223	ENST00000550442	KRT79	Q5XKE5	535 aa		13.22	□□□□□ -0.29
LETMD1-223	ENST00000550442	ISM2	Q6H9L7	571 aa		13.22	□□□□□ -0.29
LETMD1-223	ENST00000550442	USP17L2	Q6R6M4	530 aa		13.22	□□□□□ -0.29
LETMD1-223	ENST00000550442	SLFN12	Q8IYM2	578 aa		13.22	□□□□□ -0.29
LETMD1-223	ENST00000550442	OGFOD1	Q8N543	542 aa		13.22	□□□□□ -0.29
LETMD1-223	ENST00000550442	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.22	□□□□□ -0.29
LETMD1-223	ENST00000550442	FBXW7	Q969H0	707 aa		13.22	□□□□□ -0.29
LETMD1-223	ENST00000550442	GMCL1	Q96IK5	515 aa		13.22	□□□□□ -0.29
LETMD1-223	ENST00000550442	PPP1R13B	Q96KQ4	1090 aa		13.22	□□□□□ -0.29
LETMD1-223	ENST00000550442	PRO3102	Q9H379	93 aa		13.22	□□□□□ -0.29
LETMD1-223	ENST00000550442	GINM1	Q9NU53	330 aa		13.22	□□□□□ -0.29
LETMD1-223	ENST00000550442	ZNHIT6	Q9NWK9	470 aa	Known RBP	13.22	□□□□□ -0.29
LETMD1-223	ENST00000550442	PNMA2	Q9UL42	364 aa		13.22	□□□□□ -0.29
LETMD1-223	ENST00000550442	JAG2	Q9Y219	1238 aa		13.22	□□□□□ -0.29
LETMD1-223	ENST00000550442		A0A087X0B3	334 aa		13.21	□□□□□ -0.29
LETMD1-223	ENST00000550442	FAM205C	A6NFA0	338 aa		13.21	□□□□□ -0.29
LETMD1-223	ENST00000550442	USP17L5	A8MUK1	530 aa		13.21	□□□□□ -0.29
LETMD1-223	ENST00000550442	CCDC175	P0C221	793 aa		13.21	□□□□□ -0.29
LETMD1-223	ENST00000550442	SHMT1	P34896	483 aa		13.21	□□□□□ -0.29
LETMD1-223	ENST00000550442	CLK2	P49760	499 aa	Known RBP	13.21	□□□□□ -0.29
LETMD1-223	ENST00000550442	IL17A	Q16552	155 aa		13.21	□□□□□ -0.29
LETMD1-223	ENST00000550442	CALCRL	Q16602	461 aa		13.21	□□□□□ -0.29
LETMD1-223	ENST00000550442	CERKL	Q49MI3	558 aa	Predicted RBP	13.21	□□□□□ -0.29
LETMD1-223	ENST00000550442	TCP11X2	Q5H9J9	407 aa		13.21	□□□□□ -0.29
LETMD1-223	ENST00000550442	FIGN	Q5HY92	759 aa		13.21	□□□□□ -0.29
LETMD1-223	ENST00000550442	HYI	Q5T013	277 aa		13.21	□□□□□ -0.29
LETMD1-223	ENST00000550442	ZNF662	Q6ZS27	426 aa		13.21	□□□□□ -0.29
LETMD1-223	ENST00000550442	HOMER1	Q86YM7	354 aa		13.21	□□□□□ -0.29
LETMD1-223	ENST00000550442	TXLNB	Q8N3L3	684 aa		13.21	□□□□□ -0.29
LETMD1-223	ENST00000550442	TC2N	Q8N9U0	490 aa		13.21	□□□□□ -0.29
LETMD1-223	ENST00000550442	SLC44A5	Q8NCS7	719 aa		13.21	□□□□□ -0.29
LETMD1-223	ENST00000550442	TBCK	Q8TEA7	893 aa		13.21	□□□□□ -0.29
LETMD1-223	ENST00000550442	ANKRD7	Q92527	254 aa		13.21	□□□□□ -0.29
LETMD1-223	ENST00000550442	CDK5RAP3	Q96JB5	506 aa		13.21	□□□□□ -0.29
LETMD1-223	ENST00000550442	PIGS	Q96S52	555 aa		13.21	□□□□□ -0.29
LETMD1-223	ENST00000550442	GML	Q99445	158 aa		13.21	□□□□□ -0.29
LETMD1-223	ENST00000550442	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.21	□□□□□ -0.29
LETMD1-223	ENST00000550442	TMOD2	Q9NZR1	351 aa		13.21	□□□□□ -0.29
LETMD1-223	ENST00000550442	N4BP3	O15049	544 aa		13.2	□□□□□ -0.3
LETMD1-223	ENST00000550442	PLA2G6	O60733	806 aa		13.2	□□□□□ -0.3
LETMD1-223	ENST00000550442	CCNE1	P24864	410 aa		13.2	□□□□□ -0.3
LETMD1-223	ENST00000550442	LRRC63	Q05C16	580 aa		13.2	□□□□□ -0.3
LETMD1-223	ENST00000550442	LETM2	Q2VYF4	491 aa		13.2	□□□□□ -0.3
LETMD1-223	ENST00000550442	DACT2	Q5SW24	774 aa		13.2	□□□□□ -0.3
LETMD1-223	ENST00000550442	TYW1B	Q6NUM6	668 aa		13.2	□□□□□ -0.3
LETMD1-223	ENST00000550442	APTX	Q7Z2E3	356 aa	Known RBP	13.2	□□□□□ -0.3
LETMD1-223	ENST00000550442	CCDC84	Q86UT8	332 aa	Predicted RBP	13.2	□□□□□ -0.3
LETMD1-223	ENST00000550442	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.2	□□□□□ -0.3
LETMD1-223	ENST00000550442	NELFB	Q8WX92	580 aa		13.2	□□□□□ -0.3
LETMD1-223	ENST00000550442	LRCH3	Q96II8	777 aa		13.2	□□□□□ -0.3
LETMD1-223	ENST00000550442	WNK4	Q96J92	1243 aa		13.2	□□□□□ -0.3
LETMD1-223	ENST00000550442	EDEM3	Q9BZQ6	932 aa		13.2	□□□□□ -0.3
LETMD1-223	ENST00000550442	PSTPIP2	Q9H939	334 aa		13.2	□□□□□ -0.3
LETMD1-223	ENST00000550442	EXOC1	Q9NV70	894 aa		13.2	□□□□□ -0.3
LETMD1-223	ENST00000550442	LRWD1	Q9UFC0	647 aa		13.2	□□□□□ -0.3
LETMD1-223	ENST00000550442	RABGAP1	Q9Y3P9	1069 aa		13.2	□□□□□ -0.3
LETMD1-223	ENST00000550442	SOX1	O00570	391 aa	Predicted RBP	13.19	□□□□□ -0.3
LETMD1-223	ENST00000550442	WNT10B	O00744	389 aa		13.19	□□□□□ -0.3
LETMD1-223	ENST00000550442	AKR1B1	P15121	316 aa		13.19	□□□□□ -0.3
LETMD1-223	ENST00000550442	MUT	P22033	750 aa		13.19	□□□□□ -0.3
LETMD1-223	ENST00000550442	ARID5B	Q14865	1188 aa		13.19	□□□□□ -0.3
LETMD1-223	ENST00000550442	NAALADL2	Q58DX5	795 aa		13.19	□□□□□ -0.3
LETMD1-223	ENST00000550442	BTNL9	Q6UXG8	535 aa		13.19	□□□□□ -0.3
LETMD1-223	ENST00000550442	CYP26C1	Q6V0L0	522 aa		13.19	□□□□□ -0.3
LETMD1-223	ENST00000550442	UNC13D	Q70J99	1090 aa		13.19	□□□□□ -0.3
LETMD1-223	ENST00000550442	ADGRF4	Q8IZF3	695 aa		13.19	□□□□□ -0.3
LETMD1-223	ENST00000550442	CERS5	Q8N5B7	392 aa		13.19	□□□□□ -0.3
LETMD1-223	ENST00000550442	SAMD3	Q8N6K7	520 aa		13.19	□□□□□ -0.3
LETMD1-223	ENST00000550442	TRIM9	Q9C026	710 aa		13.19	□□□□□ -0.3
LETMD1-223	ENST00000550442	SH2D4A	Q9H788	454 aa		13.19	□□□□□ -0.3
LETMD1-223	ENST00000550442	JMJD4	Q9H9V9	463 aa		13.19	□□□□□ -0.3
LETMD1-223	ENST00000550442	SAMSN1	Q9NSI8	373 aa	Known RBP	13.19	□□□□□ -0.3
LETMD1-223	ENST00000550442	PPP2R2C	Q9Y2T4	447 aa		13.19	□□□□□ -0.3
LETMD1-223	ENST00000550442	KCNJ18	B7U540	433 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms