RNA–Protein interactions for RNA: ENST00000549915.5

RAB5B-207, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 494 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-207ENST00000549915 B3GALT4O96024 378 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 TOP1P11387 765 aaKnown RBP4.31□□□□□ -1.72
RAB5B-207ENST00000549915 HSP90B1P14625 803 aaKnown RBP4.31□□□□□ -1.72
RAB5B-207ENST00000549915 ATP5JP18859 108 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 CMA1P23946 247 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 LMAN1P49257 510 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 EIF5P55010 431 aaKnown RBP4.31□□□□□ -1.72
RAB5B-207ENST00000549915 CORO7P57737 925 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 ST5P78524 1137 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 GSTM4Q03013 218 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 APOBRQ0VD83 1088 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 TBX2Q13207 712 aaPredicted RBP4.31□□□□□ -1.72
RAB5B-207ENST00000549915 G3BP1Q13283 466 aaKnown RBP eCLIP4.31□□□□□ -1.72
RAB5B-207ENST00000549915 NCAPHQ15003 741 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 STK38Q15208 465 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 SF3A1Q15459 793 aaKnown RBP4.31□□□□□ -1.72
RAB5B-207ENST00000549915 LONRF2Q1L5Z9 754 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 DPCR1Q3MIW9 517 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 HSP90B2PQ58FF3 399 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 HSP90AB2PQ58FF8 381 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 EXOSC6Q5RKV6 272 aaKnown RBP4.31□□□□□ -1.72
RAB5B-207ENST00000549915 INTS5Q6P9B9 1019 aaKnown RBP4.31□□□□□ -1.72
RAB5B-207ENST00000549915 SRGAP1Q7Z6B7 1085 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 AGGF1Q8N302 714 aaeCLIP4.31□□□□□ -1.72
RAB5B-207ENST00000549915 LINC00301Q8NCQ3 95 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 CCDC74AQ96AQ1 378 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 FAM227BQ96M60 508 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 FRMD6Q96NE9 622 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 TCF12Q99081 682 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 CORO1BQ9BR76 489 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 DSCC1Q9BVC3 393 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 NAA15Q9BXJ9 866 aaKnown RBP4.31□□□□□ -1.72
RAB5B-207ENST00000549915 TMPRSS13Q9BYE2 586 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 DEF6Q9H4E7 631 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 NPHS2Q9NP85 383 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 ZFP64Q9NPA5 681 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 MYO1AQ9UBC5 1043 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 DBF4Q9UBU7 674 aaPredicted RBP4.31□□□□□ -1.72
RAB5B-207ENST00000549915 HOOK1Q9UJC3 728 aaKnown RBP4.31□□□□□ -1.72
RAB5B-207ENST00000549915 ADAM21Q9UKJ8 722 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 PPP2R2CQ9Y2T4 447 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 PIK3C2AO00443 1686 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 SLIT3O75094 1523 aa4.31□□□□□ -1.72
RAB5B-207ENST00000549915 ACEP12821 1306 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 WDR19Q8NEZ3 1342 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 LOC100289279A0A1B0GTE1 492 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 A6NNZ2 444 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 GPR182O15218 404 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 SPTLC2O15270 562 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 CUTAO60888 179 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 ADAM11O75078 769 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 PPP6R2O75170 966 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 PPFIA4O75335 1185 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 ALX3O95076 343 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 WISP1O95388 367 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 DDX58O95786 925 aaKnown RBP4.3□□□□□ -1.72
RAB5B-207ENST00000549915 SERPINC1P01008 464 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 IGLV1-40P01703 118 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 CCDC175P0C221 793 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 NBPF7P0C2Y1 421 aaPredicted RBP4.3□□□□□ -1.72
RAB5B-207ENST00000549915 ATP2B1P20020 1258 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 AMPHP49418 695 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 AARSP49588 968 aaKnown RBP eCLIP4.3□□□□□ -1.72
RAB5B-207ENST00000549915 MMP14P50281 582 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 UBASH3AP57075 661 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 CHMP4BP1P59074 171 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 EIF4A1P60842 406 aaKnown RBP4.3□□□□□ -1.72
RAB5B-207ENST00000549915 GNG11P61952 73 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 PLCB3Q01970 1234 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 SCRN1Q12765 414 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 STK3Q13188 491 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 ORC1Q13415 861 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 GNL2Q13823 731 aaKnown RBP4.3□□□□□ -1.72
RAB5B-207ENST00000549915 WHAMMP3Q1A5X7 153 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 TUBB8Q3ZCM7 444 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 CFAP100Q494V2 611 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 MAP9Q49MG5 647 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 BEND6Q5SZJ8 279 aaPredicted RBP4.3□□□□□ -1.72
RAB5B-207ENST00000549915 ARTNQ5T4W7 220 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 ALG1LQ6GMV1 187 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 OLFM4Q6UX06 510 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 KSR2Q6VAB6 950 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 Q6ZUG5 572 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 TMC7Q7Z402 723 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 CCDC91Q7Z6B0 441 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 ARHGEF25Q86VW2 580 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 TMEM139Q8IV31 216 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 FAM20CQ8IXL6 584 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 C10orf67Q8IYJ2 551 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 Q8N3U1 123 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 TRIML1Q8N9V2 468 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 LRRN4CLQ8ND94 238 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 LINS1Q8NG48 757 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 UBASH3BQ8TF42 649 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 RUBCNQ92622 972 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 CCDC51Q96ER9 411 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 RPGRIP1Q96KN7 1286 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 HHIPQ96QV1 700 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 PANX2Q96RD6 677 aa4.3□□□□□ -1.72
RAB5B-207ENST00000549915 CEP89Q96ST8 783 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms