RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 WWC2Q6AWC2 1192 aa11.3□□□□□ -0.6
HDAC7-229ENST00000549883 ANKRD33Q7Z3H0 272 aa11.3□□□□□ -0.6
HDAC7-229ENST00000549883 VSIG10LQ86VR7 867 aa11.3□□□□□ -0.6
HDAC7-229ENST00000549883 FAM126BQ8IXS8 530 aa11.3□□□□□ -0.6
HDAC7-229ENST00000549883 AFG1LQ8WV93 481 aa11.3□□□□□ -0.6
HDAC7-229ENST00000549883 LRCH3Q96II8 777 aa11.3□□□□□ -0.6
HDAC7-229ENST00000549883 IWS1Q96ST2 819 aa11.3□□□□□ -0.6
HDAC7-229ENST00000549883 DDX41Q9UJV9 622 aaKnown RBP11.3□□□□□ -0.6
HDAC7-229ENST00000549883 TELO2Q9Y4R8 837 aa11.3□□□□□ -0.6
HDAC7-229ENST00000549883 TRIP12Q14669 1992 aaPredicted RBP11.3□□□□□ -0.6
HDAC7-229ENST00000549883 DTNBO60941 627 aa11.29□□□□□ -0.6
HDAC7-229ENST00000549883 EIF3JO75822 258 aaKnown RBP11.29□□□□□ -0.6
HDAC7-229ENST00000549883 SLC34A2O95436 690 aa11.29□□□□□ -0.6
HDAC7-229ENST00000549883 SEC24BO95487 1268 aa11.29□□□□□ -0.6
HDAC7-229ENST00000549883 HMGB1P09429 215 aaKnown RBP11.29□□□□□ -0.6
HDAC7-229ENST00000549883 PURAQ00577 322 aaKnown RBP11.29□□□□□ -0.6
HDAC7-229ENST00000549883 TOB2Q14106 344 aaPredicted RBP11.29□□□□□ -0.6
HDAC7-229ENST00000549883 TTLL4Q14679 1199 aa11.29□□□□□ -0.6
HDAC7-229ENST00000549883 C9orf50Q5SZB4 431 aa11.29□□□□□ -0.6
HDAC7-229ENST00000549883 SYNE3Q6ZMZ3 975 aa11.29□□□□□ -0.6
HDAC7-229ENST00000549883 HEATR3Q7Z4Q2 680 aa11.29□□□□□ -0.6
HDAC7-229ENST00000549883 SLC43A3Q8NBI5 491 aa11.29□□□□□ -0.6
HDAC7-229ENST00000549883 MPHOSPH6Q99547 160 aaKnown RBP11.29□□□□□ -0.6
HDAC7-229ENST00000549883 UPF3BQ9BZI7 483 aaKnown RBP11.29□□□□□ -0.6
HDAC7-229ENST00000549883 MAF1Q9H063 256 aa11.29□□□□□ -0.6
HDAC7-229ENST00000549883 TRPV6Q9H1D0 765 aa11.29□□□□□ -0.6
HDAC7-229ENST00000549883 TMEM39AQ9NV64 488 aa11.29□□□□□ -0.6
HDAC7-229ENST00000549883 RTEL1Q9NZ71 1219 aa11.29□□□□□ -0.6
HDAC7-229ENST00000549883 SEC63Q9UGP8 760 aaKnown RBP11.29□□□□□ -0.6
HDAC7-229ENST00000549883 TBX21Q9UL17 535 aa11.29□□□□□ -0.6
HDAC7-229ENST00000549883 V9GY48 417 aaPredicted RBP11.29□□□□□ -0.6
HDAC7-229ENST00000549883 UMODL1Q5DID0 1318 aa11.29□□□□□ -0.6
HDAC7-229ENST00000549883 LAMA3Q16787 3333 aa11.29□□□□□ -0.6
HDAC7-229ENST00000549883 SCN5AQ14524 2016 aa11.28□□□□□ -0.6
HDAC7-229ENST00000549883 A6NJR5 290 aa11.28□□□□□ -0.6
HDAC7-229ENST00000549883 DCDC2CA8MYV0 355 aa11.28□□□□□ -0.6
HDAC7-229ENST00000549883 KIAA0355O15063 1070 aa11.28□□□□□ -0.6
HDAC7-229ENST00000549883 CD4P01730 458 aa11.28□□□□□ -0.6
HDAC7-229ENST00000549883 FGD1P98174 961 aa11.28□□□□□ -0.6
HDAC7-229ENST00000549883 SEMA3FQ13275 785 aa11.28□□□□□ -0.6
HDAC7-229ENST00000549883 SHHQ15465 462 aa11.28□□□□□ -0.6
HDAC7-229ENST00000549883 RUFY3Q7L099 469 aa11.28□□□□□ -0.6
HDAC7-229ENST00000549883 PGBD1Q96JS3 809 aa11.28□□□□□ -0.6
HDAC7-229ENST00000549883 TOX2Q96NM4 488 aa11.28□□□□□ -0.6
HDAC7-229ENST00000549883 LBHD1Q9BQE6 289 aaPredicted RBP11.28□□□□□ -0.6
HDAC7-229ENST00000549883 AGXT2Q9BYV1 514 aa11.28□□□□□ -0.6
HDAC7-229ENST00000549883 PPP1R12CQ9BZL4 782 aa11.28□□□□□ -0.6
HDAC7-229ENST00000549883 PSTPIP2Q9H939 334 aa11.28□□□□□ -0.6
HDAC7-229ENST00000549883 NCOA5Q9HCD5 579 aaKnown RBP11.28□□□□□ -0.6
HDAC7-229ENST00000549883 ZSWIM6Q9HCJ5 1215 aa11.28□□□□□ -0.6
HDAC7-229ENST00000549883 MAP3K20Q9NYL2 800 aaKnown RBP11.28□□□□□ -0.6
HDAC7-229ENST00000549883 PRKAG2Q9UGJ0 569 aa11.28□□□□□ -0.6
HDAC7-229ENST00000549883 FRMPD4Q14CM0 1322 aa11.28□□□□□ -0.6
HDAC7-229ENST00000549883 B4DLN1 442 aa11.27□□□□□ -0.61
HDAC7-229ENST00000549883 STXBP3O00186 592 aa11.27□□□□□ -0.61
HDAC7-229ENST00000549883 PIK3CDO00329 1044 aa11.27□□□□□ -0.61
HDAC7-229ENST00000549883 NKRFO15226 690 aaKnown RBP eCLIP11.27□□□□□ -0.61
HDAC7-229ENST00000549883 B4GALT4O60513 344 aa11.27□□□□□ -0.61
HDAC7-229ENST00000549883 GH1P01241 217 aa11.27□□□□□ -0.61
HDAC7-229ENST00000549883 MMP3P08254 477 aa11.27□□□□□ -0.61
HDAC7-229ENST00000549883 CCND2P30279 289 aa11.27□□□□□ -0.61
HDAC7-229ENST00000549883 CPT1AP50416 773 aa11.27□□□□□ -0.61
HDAC7-229ENST00000549883 MRPL12P52815 198 aaKnown RBP11.27□□□□□ -0.61
HDAC7-229ENST00000549883 CHMP4BP1P59074 171 aa11.27□□□□□ -0.61
HDAC7-229ENST00000549883 CCT2P78371 535 aaKnown RBP11.27□□□□□ -0.61
HDAC7-229ENST00000549883 NBPF20Q3BBV1 942 aa11.27□□□□□ -0.61
HDAC7-229ENST00000549883 TDHQ8IZJ6 230 aa11.27□□□□□ -0.61
HDAC7-229ENST00000549883 SAMD3Q8N6K7 520 aa11.27□□□□□ -0.61
HDAC7-229ENST00000549883 SMARCC2Q8TAQ2 1214 aa11.27□□□□□ -0.61
HDAC7-229ENST00000549883 KAT2BQ92831 832 aa11.27□□□□□ -0.61
HDAC7-229ENST00000549883 TRMT13Q9NUP7 481 aaKnown RBP11.27□□□□□ -0.61
HDAC7-229ENST00000549883 RBM28Q9NW13 759 aaKnown RBP11.27□□□□□ -0.61
HDAC7-229ENST00000549883 TMEM260Q9NX78 707 aa11.27□□□□□ -0.61
HDAC7-229ENST00000549883 MRVI1Q9Y6F6 885 aa11.27□□□□□ -0.61
HDAC7-229ENST00000549883 ZEB2O60315 1214 aa11.26□□□□□ -0.61
HDAC7-229ENST00000549883 CABYRO75952 493 aa11.26□□□□□ -0.61
HDAC7-229ENST00000549883 ZNF286BP0CG31 522 aa11.26□□□□□ -0.61
HDAC7-229ENST00000549883 RAG1P15918 1043 aa11.26□□□□□ -0.61
HDAC7-229ENST00000549883 UBA1P22314 1058 aaKnown RBP11.26□□□□□ -0.61
HDAC7-229ENST00000549883 PSMA5P28066 241 aa11.26□□□□□ -0.61
HDAC7-229ENST00000549883 PDIA3P30101 505 aaKnown RBP11.26□□□□□ -0.61
HDAC7-229ENST00000549883 CYP2C18P33260 490 aa11.26□□□□□ -0.61
HDAC7-229ENST00000549883 METAP2P50579 478 aaKnown RBP eCLIP11.26□□□□□ -0.61
HDAC7-229ENST00000549883 TRAF1Q13077 416 aa11.26□□□□□ -0.61
HDAC7-229ENST00000549883 NTRK3Q16288 839 aa11.26□□□□□ -0.61
HDAC7-229ENST00000549883 PKN1Q16512 942 aa11.26□□□□□ -0.61
HDAC7-229ENST00000549883 MYSM1Q5VVJ2 828 aa11.26□□□□□ -0.61
HDAC7-229ENST00000549883 C16orf59Q7L2K0 433 aa11.26□□□□□ -0.61
HDAC7-229ENST00000549883 FBXL16Q8N461 479 aa11.26□□□□□ -0.61
HDAC7-229ENST00000549883 PHKBQ93100 1093 aa11.26□□□□□ -0.61
HDAC7-229ENST00000549883 MTG1Q9BT17 334 aaPredicted RBP11.26□□□□□ -0.61
HDAC7-229ENST00000549883 POLR3EQ9NVU0 708 aa11.26□□□□□ -0.61
HDAC7-229ENST00000549883 SZT2Q5T011 3432 aa11.25□□□□□ -0.61
HDAC7-229ENST00000549883 A0A1W2PPC1 479 aa11.25□□□□□ -0.61
HDAC7-229ENST00000549883 GGPS1O95749 300 aa11.25□□□□□ -0.61
HDAC7-229ENST00000549883 TIMP1P01033 207 aa11.25□□□□□ -0.61
HDAC7-229ENST00000549883 CYP2C9P11712 490 aa11.25□□□□□ -0.61
HDAC7-229ENST00000549883 NAPAP54920 295 aa11.25□□□□□ -0.61
HDAC7-229ENST00000549883 EVCP57679 992 aa11.25□□□□□ -0.61
HDAC7-229ENST00000549883 HIC1Q14526 733 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms