RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 EMILIN3Q9NT22 766 aa17.9■□□□□ 0.46
CUX1-213ENST00000549414 BARHL2Q9NY43 387 aa17.9■□□□□ 0.46
CUX1-213ENST00000549414 PPM1KQ8N3J5 372 aa17.9■□□□□ 0.46
CUX1-213ENST00000549414 NOD1Q9Y239 953 aa17.9■□□□□ 0.46
CUX1-213ENST00000549414 GOLGA6CA6NDK9 693 aa17.9■□□□□ 0.46
CUX1-213ENST00000549414 GOLGA6DP0CG33 693 aa17.9■□□□□ 0.46
CUX1-213ENST00000549414 PLCD4Q9BRC7 762 aa17.9■□□□□ 0.46
CUX1-213ENST00000549414 OSBPL5Q9H0X9 879 aaPredicted RBP17.9■□□□□ 0.46
CUX1-213ENST00000549414 NDST4Q9H3R1 872 aa17.9■□□□□ 0.46
CUX1-213ENST00000549414 GOLGA6AQ9NYA3 693 aa17.9■□□□□ 0.46
CUX1-213ENST00000549414 HYOU1Q9Y4L1 999 aa17.9■□□□□ 0.46
CUX1-213ENST00000549414 MTF1Q14872 753 aa17.9■□□□□ 0.46
CUX1-213ENST00000549414 TTBK2Q6IQ55 1244 aa17.9■□□□□ 0.46
CUX1-213ENST00000549414 KIFAP3Q92845 792 aa17.9■□□□□ 0.46
CUX1-213ENST00000549414 PRPF6O94906 941 aaKnown RBP17.89■□□□□ 0.45
CUX1-213ENST00000549414 EIF4A3P38919 411 aaKnown RBP17.89■□□□□ 0.45
CUX1-213ENST00000549414 MRPS25P82663 173 aaKnown RBP17.89■□□□□ 0.45
CUX1-213ENST00000549414 ATP2C1P98194 919 aaPredicted RBP17.89■□□□□ 0.45
CUX1-213ENST00000549414 CTTNQ14247 550 aaKnown RBP17.89■□□□□ 0.45
CUX1-213ENST00000549414 NEDD1Q8NHV4 660 aa17.89■□□□□ 0.45
CUX1-213ENST00000549414 PIGOQ8TEQ8 1089 aa17.89■□□□□ 0.45
CUX1-213ENST00000549414 SH3GLB2Q9NR46 395 aa17.89■□□□□ 0.45
CUX1-213ENST00000549414 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.89■□□□□ 0.45
CUX1-213ENST00000549414 MTRF1LQ9UGC7 380 aaKnown RBP17.89■□□□□ 0.45
CUX1-213ENST00000549414 CEP83Q9Y592 693 aa17.89■□□□□ 0.45
CUX1-213ENST00000549414 E9PMD0 336 aa17.89■□□□□ 0.45
CUX1-213ENST00000549414 LLGL1Q15334 1064 aa17.89■□□□□ 0.45
CUX1-213ENST00000549414 AOC3Q16853 763 aa17.89■□□□□ 0.45
CUX1-213ENST00000549414 FBXO38Q6PIJ6 1188 aa17.89■□□□□ 0.45
CUX1-213ENST00000549414 TXNRD3Q86VQ6 643 aa17.89■□□□□ 0.45
CUX1-213ENST00000549414 EBAG9O00559 213 aa17.89■□□□□ 0.45
CUX1-213ENST00000549414 IVLP07476 585 aa17.89■□□□□ 0.45
CUX1-213ENST00000549414 NCBP1Q09161 790 aaKnown RBP17.89■□□□□ 0.45
CUX1-213ENST00000549414 BRD3Q15059 726 aa17.89■□□□□ 0.45
CUX1-213ENST00000549414 MB21D1Q8N884 522 aa17.89■□□□□ 0.45
CUX1-213ENST00000549414 ENGASEQ8NFI3 743 aa17.89■□□□□ 0.45
CUX1-213ENST00000549414 TBC1D16Q8TBP0 767 aa17.89■□□□□ 0.45
CUX1-213ENST00000549414 GLG1Q92896 1179 aa17.89■□□□□ 0.45
CUX1-213ENST00000549414 PCIF1Q9H4Z3 704 aa17.89■□□□□ 0.45
CUX1-213ENST00000549414 FAM133AQ8N9E0 248 aa17.88■□□□□ 0.45
CUX1-213ENST00000549414 MRRFQ96E11 262 aaKnown RBP17.88■□□□□ 0.45
CUX1-213ENST00000549414 EPC1Q9H2F5 836 aa17.88■□□□□ 0.45
CUX1-213ENST00000549414 PHLPP2Q6ZVD8 1323 aa17.88■□□□□ 0.45
CUX1-213ENST00000549414 ZBTB5O15062 677 aa17.88■□□□□ 0.45
CUX1-213ENST00000549414 LRRN2O75325 713 aa17.88■□□□□ 0.45
CUX1-213ENST00000549414 H2AFZP0C0S5 128 aa17.88■□□□□ 0.45
CUX1-213ENST00000549414 H2AFVQ71UI9 128 aa17.88■□□□□ 0.45
CUX1-213ENST00000549414 FBXO33Q7Z6M2 555 aa17.88■□□□□ 0.45
CUX1-213ENST00000549414 CERKQ8TCT0 537 aa17.88■□□□□ 0.45
CUX1-213ENST00000549414 BPIFA3Q9BQP9 254 aa17.88■□□□□ 0.45
CUX1-213ENST00000549414 PHF20Q9BVI0 1012 aa17.88■□□□□ 0.45
CUX1-213ENST00000549414 RABGGTAQ92696 567 aa17.88■□□□□ 0.45
CUX1-213ENST00000549414 WTIPA6NIX2 430 aaPredicted RBP17.88■□□□□ 0.45
CUX1-213ENST00000549414 CD19P15391 556 aa17.88■□□□□ 0.45
CUX1-213ENST00000549414 ZBED6P86452 979 aa17.88■□□□□ 0.45
CUX1-213ENST00000549414 FMNL3Q8IVF7 1028 aa17.88■□□□□ 0.45
CUX1-213ENST00000549414 C10orf67Q8IYJ2 551 aa17.88■□□□□ 0.45
CUX1-213ENST00000549414 PANX2Q96RD6 677 aa17.88■□□□□ 0.45
CUX1-213ENST00000549414 NHEJ1Q9H9Q4 299 aaPredicted RBP17.88■□□□□ 0.45
CUX1-213ENST00000549414 IQCDQ96DY2 449 aa17.87■□□□□ 0.45
CUX1-213ENST00000549414 DAGLAQ9Y4D2 1042 aa17.87■□□□□ 0.45
CUX1-213ENST00000549414 POTEB3A0JP26 581 aa17.87■□□□□ 0.45
CUX1-213ENST00000549414 POTECB2RU33 542 aa17.87■□□□□ 0.45
CUX1-213ENST00000549414 ADRA2BP18089 450 aa17.87■□□□□ 0.45
CUX1-213ENST00000549414 MAP3K9P80192 1104 aa17.87■□□□□ 0.45
CUX1-213ENST00000549414 MCTP2Q6DN12 878 aa17.87■□□□□ 0.45
CUX1-213ENST00000549414 POTEBQ6S5H4 581 aa17.87■□□□□ 0.45
CUX1-213ENST00000549414 C3orf67Q6ZVT6 689 aa17.87■□□□□ 0.45
CUX1-213ENST00000549414 ADGRA1Q86SQ6 560 aa17.87■□□□□ 0.45
CUX1-213ENST00000549414 IRX2Q9BZI1 471 aaPredicted RBP17.87■□□□□ 0.45
CUX1-213ENST00000549414 RIC8AQ9NPQ8 531 aa17.87■□□□□ 0.45
CUX1-213ENST00000549414 IKBKGQ9Y6K9 419 aa17.87■□□□□ 0.45
CUX1-213ENST00000549414 hCG_1984214I3L0E3 225 aa17.87■□□□□ 0.45
CUX1-213ENST00000549414 MYL1P05976 194 aa17.87■□□□□ 0.45
CUX1-213ENST00000549414 FCER1AP12319 257 aa17.87■□□□□ 0.45
CUX1-213ENST00000549414 GABPB1Q06547 395 aaPredicted RBP17.87■□□□□ 0.45
CUX1-213ENST00000549414 TRPC3Q13507 836 aa17.87■□□□□ 0.45
CUX1-213ENST00000549414 QRICH1Q2TAL8 776 aa17.87■□□□□ 0.45
CUX1-213ENST00000549414 CPLX4Q7Z7G2 160 aa17.87■□□□□ 0.45
CUX1-213ENST00000549414 FOXP4Q8IVH2 680 aaPredicted RBP17.87■□□□□ 0.45
CUX1-213ENST00000549414 ZNF713Q8N859 430 aaPredicted RBP17.87■□□□□ 0.45
CUX1-213ENST00000549414 THAP9Q9H5L6 903 aa17.87■□□□□ 0.45
CUX1-213ENST00000549414 METTL14Q9HCE5 456 aaKnown RBP17.87■□□□□ 0.45
CUX1-213ENST00000549414 PDE11AQ9HCR9 933 aa17.87■□□□□ 0.45
CUX1-213ENST00000549414 KCNK9Q9NPC2 374 aa17.87■□□□□ 0.45
CUX1-213ENST00000549414 SPATA31A5Q5VU36 1347 aa17.86■□□□□ 0.45
CUX1-213ENST00000549414 SPATA31A7Q8IWB4 1347 aa17.86■□□□□ 0.45
CUX1-213ENST00000549414 UBL4BQ8N7F7 174 aa17.86■□□□□ 0.45
CUX1-213ENST00000549414 DNAI2Q9GZS0 605 aa17.86■□□□□ 0.45
CUX1-213ENST00000549414 SUGCTQ9HAC7 445 aa17.86■□□□□ 0.45
CUX1-213ENST00000549414 ECE2O60344 883 aa17.86■□□□□ 0.45
CUX1-213ENST00000549414 MOCS3O95396 460 aa17.86■□□□□ 0.45
CUX1-213ENST00000549414 EIF2AK2P19525 551 aaKnown RBP17.86■□□□□ 0.45
CUX1-213ENST00000549414 TMEM179Q6ZVK1 233 aa17.86■□□□□ 0.45
CUX1-213ENST00000549414 FAM186BQ8IYM0 893 aa17.86■□□□□ 0.45
CUX1-213ENST00000549414 ADGRF4Q8IZF3 695 aa17.86■□□□□ 0.45
CUX1-213ENST00000549414 ANKRD35Q8N283 1001 aa17.86■□□□□ 0.45
CUX1-213ENST00000549414 DCPSQ96C86 337 aaKnown RBP17.86■□□□□ 0.45
CUX1-213ENST00000549414 AZI2Q9H6S1 392 aa17.86■□□□□ 0.45
CUX1-213ENST00000549414 UTP11Q9Y3A2 253 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms