RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 GUCY1A2P33402 732 aa8.27□□□□□ -1.09
DEPDC4-208ENST00000549341 SHMT1P34896 483 aa8.27□□□□□ -1.09
DEPDC4-208ENST00000549341 MLLT3P42568 568 aaPredicted RBP8.27□□□□□ -1.09
DEPDC4-208ENST00000549341 TDO2P48775 406 aa8.27□□□□□ -1.09
DEPDC4-208ENST00000549341 NT5C2P49902 561 aa8.27□□□□□ -1.09
DEPDC4-208ENST00000549341 CSPP1Q1MSJ5 1256 aa8.27□□□□□ -1.09
DEPDC4-208ENST00000549341 KIAA1755Q5JYT7 1200 aa8.27□□□□□ -1.09
DEPDC4-208ENST00000549341 DHX32Q7L7V1 743 aaKnown RBP8.27□□□□□ -1.09
DEPDC4-208ENST00000549341 FAM126BQ8IXS8 530 aa8.27□□□□□ -1.09
DEPDC4-208ENST00000549341 NCOA7Q8NI08 942 aa8.27□□□□□ -1.09
DEPDC4-208ENST00000549341 HLA-CQ95604 372 aa8.27□□□□□ -1.09
DEPDC4-208ENST00000549341 TMX3Q96JJ7 454 aa8.27□□□□□ -1.09
DEPDC4-208ENST00000549341 CRNKL1Q9BZJ0 848 aaKnown RBP8.27□□□□□ -1.09
DEPDC4-208ENST00000549341 PUS7LQ9H0K6 701 aaKnown RBP8.27□□□□□ -1.09
DEPDC4-208ENST00000549341 EHD4Q9H223 541 aa8.27□□□□□ -1.09
DEPDC4-208ENST00000549341 RNF41Q9H4P4 317 aaPredicted RBP8.27□□□□□ -1.09
DEPDC4-208ENST00000549341 CNNM2Q9H8M5 875 aa8.27□□□□□ -1.09
DEPDC4-208ENST00000549341 ATP13A2Q9NQ11 1180 aa8.27□□□□□ -1.09
DEPDC4-208ENST00000549341 FAM184BQ9ULE4 1060 aa8.27□□□□□ -1.09
DEPDC4-208ENST00000549341 COG5Q9UP83 839 aa8.27□□□□□ -1.09
DEPDC4-208ENST00000549341 WDFY4Q6ZS81 3184 aa8.26□□□□□ -1.09
DEPDC4-208ENST00000549341 GOLGA6L22H0YM25 854 aa8.26□□□□□ -1.09
DEPDC4-208ENST00000549341 ARVCFO00192 962 aa8.26□□□□□ -1.09
DEPDC4-208ENST00000549341 FGAP02671 866 aa8.26□□□□□ -1.09
DEPDC4-208ENST00000549341 CYP21A2P08686 494 aa8.26□□□□□ -1.09
DEPDC4-208ENST00000549341 PCP11498 1178 aaKnown RBP8.26□□□□□ -1.09
DEPDC4-208ENST00000549341 AK2P54819 239 aa8.26□□□□□ -1.09
DEPDC4-208ENST00000549341 NHLH1Q02575 133 aa8.26□□□□□ -1.09
DEPDC4-208ENST00000549341 CUL4AQ13619 759 aa8.26□□□□□ -1.09
DEPDC4-208ENST00000549341 TMEM132BQ14DG7 1078 aa8.26□□□□□ -1.09
DEPDC4-208ENST00000549341 ZNF792Q3KQV3 632 aa8.26□□□□□ -1.09
DEPDC4-208ENST00000549341 GIMAP6Q6P9H5 292 aa8.26□□□□□ -1.09
DEPDC4-208ENST00000549341 TTC6Q86TZ1 520 aa8.26□□□□□ -1.09
DEPDC4-208ENST00000549341 GBP4Q96PP9 640 aa8.26□□□□□ -1.09
DEPDC4-208ENST00000549341 STRBPQ96SI9 672 aaKnown RBP8.26□□□□□ -1.09
DEPDC4-208ENST00000549341 KRT23Q9C075 422 aa8.26□□□□□ -1.09
DEPDC4-208ENST00000549341 SPC25Q9HBM1 224 aa8.26□□□□□ -1.09
DEPDC4-208ENST00000549341 CD320Q9NPF0 282 aa8.26□□□□□ -1.09
DEPDC4-208ENST00000549341 KIF3AQ9Y496 699 aa8.26□□□□□ -1.09
DEPDC4-208ENST00000549341 PCDHA11Q9Y5I1 949 aa8.26□□□□□ -1.09
DEPDC4-208ENST00000549341 SLC4A4Q9Y6R1 1079 aa8.26□□□□□ -1.09
DEPDC4-208ENST00000549341 ELP1O95163 1332 aa8.26□□□□□ -1.09
DEPDC4-208ENST00000549341 WDR19Q8NEZ3 1342 aa8.26□□□□□ -1.09
DEPDC4-208ENST00000549341 MYO9BQ13459 2157 aa8.25□□□□□ -1.09
DEPDC4-208ENST00000549341 PRRC2BQ5JSZ5 2229 aaKnown RBP8.25□□□□□ -1.09
DEPDC4-208ENST00000549341 ZDBF2Q9HCK1 2354 aa8.25□□□□□ -1.09
DEPDC4-208ENST00000549341 PRR33A8MZF0 331 aa8.25□□□□□ -1.09
DEPDC4-208ENST00000549341 E7EWF7 191 aa8.25□□□□□ -1.09
DEPDC4-208ENST00000549341 ADCY6O43306 1168 aa8.25□□□□□ -1.09
DEPDC4-208ENST00000549341 SLC25A27O95847 323 aa8.25□□□□□ -1.09
DEPDC4-208ENST00000549341 POLR3DP05423 398 aaPredicted RBP8.25□□□□□ -1.09
DEPDC4-208ENST00000549341 MCM5P33992 734 aa8.25□□□□□ -1.09
DEPDC4-208ENST00000549341 PLCD1P51178 756 aa8.25□□□□□ -1.09
DEPDC4-208ENST00000549341 BEX3Q00994 111 aa8.25□□□□□ -1.09
DEPDC4-208ENST00000549341 ICA1Q05084 483 aa8.25□□□□□ -1.09
DEPDC4-208ENST00000549341 SART3Q15020 963 aaKnown RBP8.25□□□□□ -1.09
DEPDC4-208ENST00000549341 TMEM67Q5HYA8 995 aa8.25□□□□□ -1.09
DEPDC4-208ENST00000549341 GNASQ5JWF2 1037 aa8.25□□□□□ -1.09
DEPDC4-208ENST00000549341 CCSAPQ6IQ19 270 aaPredicted RBP8.25□□□□□ -1.09
DEPDC4-208ENST00000549341 NOL8Q76FK4 1167 aaKnown RBP8.25□□□□□ -1.09
DEPDC4-208ENST00000549341 IFNL3Q8IZI9 196 aa8.25□□□□□ -1.09
DEPDC4-208ENST00000549341 PCSK9Q8NBP7 692 aaKnown RBP8.25□□□□□ -1.09
DEPDC4-208ENST00000549341 KLHDC9Q8NEP7 349 aa8.25□□□□□ -1.09
DEPDC4-208ENST00000549341 SNIP1Q8TAD8 396 aaKnown RBP8.25□□□□□ -1.09
DEPDC4-208ENST00000549341 KIFC2Q96AC6 838 aa8.25□□□□□ -1.09
DEPDC4-208ENST00000549341 SCLYQ96I15 445 aa8.25□□□□□ -1.09
DEPDC4-208ENST00000549341 TTC14Q96N46 770 aa8.25□□□□□ -1.09
DEPDC4-208ENST00000549341 WNT8AQ9H1J5 351 aa8.25□□□□□ -1.09
DEPDC4-208ENST00000549341 ARMT1Q9H993 441 aa8.25□□□□□ -1.09
DEPDC4-208ENST00000549341 FBXO28Q9NVF7 368 aa8.25□□□□□ -1.09
DEPDC4-208ENST00000549341 SMC3Q9UQE7 1217 aa8.25□□□□□ -1.09
DEPDC4-208ENST00000549341 ERICH2A1L162 156 aa8.24□□□□□ -1.09
DEPDC4-208ENST00000549341 PI4K2BG5E9Z4 385 aa8.24□□□□□ -1.09
DEPDC4-208ENST00000549341 WNT7AO00755 349 aa8.24□□□□□ -1.09
DEPDC4-208ENST00000549341 DHX16O60231 1041 aaKnown RBP8.24□□□□□ -1.09
DEPDC4-208ENST00000549341 DUSP11O75319 330 aaKnown RBP8.24□□□□□ -1.09
DEPDC4-208ENST00000549341 ARHGEF15O94989 841 aa8.24□□□□□ -1.09
DEPDC4-208ENST00000549341 CST5P28325 142 aaPredicted RBP8.24□□□□□ -1.09
DEPDC4-208ENST00000549341 CDK7P50613 346 aa8.24□□□□□ -1.09
DEPDC4-208ENST00000549341 TTLL4Q14679 1199 aa8.24□□□□□ -1.09
DEPDC4-208ENST00000549341 ADCK5Q3MIX3 580 aa8.24□□□□□ -1.09
DEPDC4-208ENST00000549341 CXCL17Q6UXB2 119 aa8.24□□□□□ -1.09
DEPDC4-208ENST00000549341 DEFB128Q7Z7B8 93 aa8.24□□□□□ -1.09
DEPDC4-208ENST00000549341 GDPD5Q8WTR4 605 aa8.24□□□□□ -1.09
DEPDC4-208ENST00000549341 THAP11Q96EK4 314 aa8.24□□□□□ -1.09
DEPDC4-208ENST00000549341 FBXL18Q96ME1 805 aa8.24□□□□□ -1.09
DEPDC4-208ENST00000549341 ANP32EQ9BTT0 268 aa8.24□□□□□ -1.09
DEPDC4-208ENST00000549341 NOC4LQ9BVI4 516 aaKnown RBP8.24□□□□□ -1.09
DEPDC4-208ENST00000549341 TRPV6Q9H1D0 765 aa8.24□□□□□ -1.09
DEPDC4-208ENST00000549341 ARHGEF10LQ9HCE6 1279 aa8.24□□□□□ -1.09
DEPDC4-208ENST00000549341 ATP8A2Q9NTI2 1148 aa8.24□□□□□ -1.09
DEPDC4-208ENST00000549341 TCF20Q9UGU0 1960 aaKnown RBP8.24□□□□□ -1.09
DEPDC4-208ENST00000549341 LRRC37A2A6NM11 1700 aa8.23□□□□□ -1.09
DEPDC4-208ENST00000549341 DDX11L8A8MPP1 907 aa8.23□□□□□ -1.09
DEPDC4-208ENST00000549341 SNAI1O95863 264 aaPredicted RBP8.23□□□□□ -1.09
DEPDC4-208ENST00000549341 CHGBP05060 677 aa8.23□□□□□ -1.09
DEPDC4-208ENST00000549341 CYP2D6P10635 497 aa8.23□□□□□ -1.09
DEPDC4-208ENST00000549341 PDCP20941 246 aa8.23□□□□□ -1.09
DEPDC4-208ENST00000549341 STAT3P40763 770 aa8.23□□□□□ -1.09
DEPDC4-208ENST00000549341 GRB10Q13322 594 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms