RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, human

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB3-208	ENST00000549205	SLC37A4	O43826	429 aa		13.87	□□□□□ -0.19
ERBB3-208	ENST00000549205	PGK2	P07205	417 aa		13.87	□□□□□ -0.19
ERBB3-208	ENST00000549205	NR3C2	P08235	984 aa		13.87	□□□□□ -0.19
ERBB3-208	ENST00000549205	FAM86B2	P0C5J1	330 aa		13.87	□□□□□ -0.19
ERBB3-208	ENST00000549205	PTMS	P20962	102 aa		13.87	□□□□□ -0.19
ERBB3-208	ENST00000549205	PTPRE	P23469	700 aa		13.87	□□□□□ -0.19
ERBB3-208	ENST00000549205	ADORA2A	P29274	412 aa		13.87	□□□□□ -0.19
ERBB3-208	ENST00000549205	MARCKS	P29966	332 aa	Predicted RBP	13.87	□□□□□ -0.19
ERBB3-208	ENST00000549205	ZNF76	P36508	570 aa		13.87	□□□□□ -0.19
ERBB3-208	ENST00000549205	ME1	P48163	572 aa		13.87	□□□□□ -0.19
ERBB3-208	ENST00000549205	ALDH5A1	P51649	535 aa	Predicted RBP	13.87	□□□□□ -0.19
ERBB3-208	ENST00000549205	GRB14	Q14449	540 aa		13.87	□□□□□ -0.19
ERBB3-208	ENST00000549205		Q4G0T1	1027 aa		13.87	□□□□□ -0.19
ERBB3-208	ENST00000549205	CEP55	Q53EZ4	464 aa		13.87	□□□□□ -0.19
ERBB3-208	ENST00000549205	PRR16	Q569H4	304 aa		13.87	□□□□□ -0.19
ERBB3-208	ENST00000549205	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.87	□□□□□ -0.19
ERBB3-208	ENST00000549205	POTED	Q86YR6	584 aa		13.87	□□□□□ -0.19
ERBB3-208	ENST00000549205	TMEM60	Q9H2L4	133 aa		13.87	□□□□□ -0.19
ERBB3-208	ENST00000549205	RNF186	Q9NXI6	227 aa		13.87	□□□□□ -0.19
ERBB3-208	ENST00000549205	MRVI1	Q9Y6F6	885 aa		13.87	□□□□□ -0.19
ERBB3-208	ENST00000549205	MYH9	P35579	1960 aa	Known RBP	13.87	□□□□□ -0.19
ERBB3-208	ENST00000549205	SLC15A5	A6NIM6	579 aa		13.86	□□□□□ -0.19
ERBB3-208	ENST00000549205	CUTA	O60888	179 aa		13.86	□□□□□ -0.19
ERBB3-208	ENST00000549205	OR52Z1	P0C646	297 aa		13.86	□□□□□ -0.19
ERBB3-208	ENST00000549205	MYCL	P12524	364 aa	Predicted RBP	13.86	□□□□□ -0.19
ERBB3-208	ENST00000549205	PRPH	P41219	470 aa		13.86	□□□□□ -0.19
ERBB3-208	ENST00000549205	MRPS9	P82933	396 aa	Known RBP	13.86	□□□□□ -0.19
ERBB3-208	ENST00000549205	CALCRL	Q16602	461 aa		13.86	□□□□□ -0.19
ERBB3-208	ENST00000549205	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.86	□□□□□ -0.19
ERBB3-208	ENST00000549205	NIPA1	Q7RTP0	329 aa		13.86	□□□□□ -0.19
ERBB3-208	ENST00000549205	VSIG10L	Q86VR7	867 aa		13.86	□□□□□ -0.19
ERBB3-208	ENST00000549205	KRI1	Q8N9T8	703 aa	Known RBP	13.86	□□□□□ -0.19
ERBB3-208	ENST00000549205	FERMT2	Q96AC1	680 aa		13.86	□□□□□ -0.19
ERBB3-208	ENST00000549205	LENG9	Q96B70	501 aa		13.86	□□□□□ -0.19
ERBB3-208	ENST00000549205	FGD4	Q96M96	766 aa		13.86	□□□□□ -0.19
ERBB3-208	ENST00000549205	MTMR9	Q96QG7	549 aa		13.86	□□□□□ -0.19
ERBB3-208	ENST00000549205	KCNMB3	Q9NPA1	279 aa		13.86	□□□□□ -0.19
ERBB3-208	ENST00000549205	FBXO2	Q9UK22	296 aa	Predicted RBP	13.86	□□□□□ -0.19
ERBB3-208	ENST00000549205	PCDHA7	Q9UN72	937 aa		13.86	□□□□□ -0.19
ERBB3-208	ENST00000549205	SRPRB	Q9Y5M8	271 aa	Known RBP	13.86	□□□□□ -0.19
ERBB3-208	ENST00000549205	LOC102724159	A0A0B4J2E5	919 aa		13.85	□□□□□ -0.19
ERBB3-208	ENST00000549205	GOLGA6L4	A6NEF3	574 aa		13.85	□□□□□ -0.19
ERBB3-208	ENST00000549205		B4DLN1	442 aa		13.85	□□□□□ -0.19
ERBB3-208	ENST00000549205	MEIS1	O00470	390 aa		13.85	□□□□□ -0.19
ERBB3-208	ENST00000549205	TBX3	O15119	743 aa		13.85	□□□□□ -0.19
ERBB3-208	ENST00000549205	COBL	O75128	1261 aa		13.85	□□□□□ -0.19
ERBB3-208	ENST00000549205	GADD45B	O75293	160 aa	Predicted RBP	13.85	□□□□□ -0.19
ERBB3-208	ENST00000549205	TRPA1	O75762	1119 aa		13.85	□□□□□ -0.19
ERBB3-208	ENST00000549205	STAM2	O75886	525 aa		13.85	□□□□□ -0.19
ERBB3-208	ENST00000549205	TBC1D8	O95759	1140 aa		13.85	□□□□□ -0.19
ERBB3-208	ENST00000549205	EDNRB	P24530	442 aa		13.85	□□□□□ -0.19
ERBB3-208	ENST00000549205	UBE2H	P62256	183 aa		13.85	□□□□□ -0.19
ERBB3-208	ENST00000549205	SET	Q01105	290 aa	Predicted RBP	13.85	□□□□□ -0.19
ERBB3-208	ENST00000549205	PWP2	Q15269	919 aa	Known RBP	13.85	□□□□□ -0.19
ERBB3-208	ENST00000549205	ZNF792	Q3KQV3	632 aa		13.85	□□□□□ -0.19
ERBB3-208	ENST00000549205	PLA2G4D	Q86XP0	818 aa		13.85	□□□□□ -0.19
ERBB3-208	ENST00000549205	CYP2W1	Q8TAV3	490 aa		13.85	□□□□□ -0.19
ERBB3-208	ENST00000549205	MPHOSPH6	Q99547	160 aa	Known RBP	13.85	□□□□□ -0.19
ERBB3-208	ENST00000549205	MXRA8	Q9BRK3	442 aa		13.85	□□□□□ -0.19
ERBB3-208	ENST00000549205	UBIAD1	Q9Y5Z9	338 aa		13.85	□□□□□ -0.19
ERBB3-208	ENST00000549205	HTT	P42858	3142 aa		13.85	□□□□□ -0.19
ERBB3-208	ENST00000549205	ITGB5	P18084	799 aa		13.84	□□□□□ -0.19
ERBB3-208	ENST00000549205	STXBP2	Q15833	593 aa		13.84	□□□□□ -0.19
ERBB3-208	ENST00000549205	IL17A	Q16552	155 aa		13.84	□□□□□ -0.19
ERBB3-208	ENST00000549205	MORN1	Q5T089	497 aa		13.84	□□□□□ -0.19
ERBB3-208	ENST00000549205	ADAL	Q6DHV7	355 aa		13.84	□□□□□ -0.19
ERBB3-208	ENST00000549205	DTHD1	Q6ZMT9	781 aa		13.84	□□□□□ -0.19
ERBB3-208	ENST00000549205	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.84	□□□□□ -0.19
ERBB3-208	ENST00000549205	SLFN12	Q8IYM2	578 aa		13.84	□□□□□ -0.19
ERBB3-208	ENST00000549205	ETNPPL	Q8TBG4	499 aa		13.84	□□□□□ -0.19
ERBB3-208	ENST00000549205	HAS1	Q92839	578 aa		13.84	□□□□□ -0.19
ERBB3-208	ENST00000549205	ZFP91	Q96JP5	570 aa	Predicted RBP	13.84	□□□□□ -0.19
ERBB3-208	ENST00000549205	CLIC6	Q96NY7	704 aa		13.84	□□□□□ -0.19
ERBB3-208	ENST00000549205	INPP4A	Q96PE3	977 aa	Predicted RBP	13.84	□□□□□ -0.19
ERBB3-208	ENST00000549205	SAGE1	Q9NXZ1	904 aa		13.84	□□□□□ -0.19
ERBB3-208	ENST00000549205		A0A1W2PQ27	194 aa		13.83	□□□□□ -0.2
ERBB3-208	ENST00000549205		A0A1W2PQ64	194 aa		13.83	□□□□□ -0.2
ERBB3-208	ENST00000549205		A0A1W2PQD8	194 aa		13.83	□□□□□ -0.2
ERBB3-208	ENST00000549205	VWA3A	A6NCI4	1184 aa		13.83	□□□□□ -0.2
ERBB3-208	ENST00000549205	ASB14	A6NK59	587 aa		13.83	□□□□□ -0.2
ERBB3-208	ENST00000549205	TNPO2	O14787	897 aa	Known RBP	13.83	□□□□□ -0.2
ERBB3-208	ENST00000549205	MSH4	O15457	936 aa		13.83	□□□□□ -0.2
ERBB3-208	ENST00000549205	MARCH6	O60337	910 aa		13.83	□□□□□ -0.2
ERBB3-208	ENST00000549205	EIF3J	O75822	258 aa	Known RBP	13.83	□□□□□ -0.2
ERBB3-208	ENST00000549205	FCGRT	P55899	365 aa		13.83	□□□□□ -0.2
ERBB3-208	ENST00000549205	LACTB	P83111	547 aa	Predicted RBP	13.83	□□□□□ -0.2
ERBB3-208	ENST00000549205	SP3	Q02447	781 aa		13.83	□□□□□ -0.2
ERBB3-208	ENST00000549205	GRIN1	Q05586	938 aa		13.83	□□□□□ -0.2
ERBB3-208	ENST00000549205	PDE4D	Q08499	809 aa		13.83	□□□□□ -0.2
ERBB3-208	ENST00000549205	MAP2K5	Q13163	448 aa		13.83	□□□□□ -0.2
ERBB3-208	ENST00000549205	DPP9	Q86TI2	863 aa		13.83	□□□□□ -0.2
ERBB3-208	ENST00000549205	ZNF579	Q8NAF0	562 aa	Known RBP	13.83	□□□□□ -0.2
ERBB3-208	ENST00000549205	MORC4	Q8TE76	937 aa		13.83	□□□□□ -0.2
ERBB3-208	ENST00000549205	SOCS4	Q8WXH5	440 aa		13.83	□□□□□ -0.2
ERBB3-208	ENST00000549205	USP6NL	Q92738	828 aa		13.83	□□□□□ -0.2
ERBB3-208	ENST00000549205	GPRASP2	Q96D09	838 aa		13.83	□□□□□ -0.2
ERBB3-208	ENST00000549205	FAM20A	Q96MK3	541 aa		13.83	□□□□□ -0.2
ERBB3-208	ENST00000549205	JADE2	Q9NQC1	790 aa		13.83	□□□□□ -0.2
ERBB3-208	ENST00000549205	KCNH7	Q9NS40	1196 aa		13.83	□□□□□ -0.2
ERBB3-208	ENST00000549205	SLC5A4	Q9NY91	659 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms