RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 SPIRE1Q08AE8 756 aa23.44■■□□□ 1.34
RITA1-201ENST00000548278 KRT31Q15323 416 aa23.44■■□□□ 1.34
RITA1-201ENST00000548278 MRPL11Q9Y3B7 192 aaKnown RBP23.44■■□□□ 1.34
RITA1-201ENST00000548278 PVALEFA0A1B0GWK0 134 aa23.43■■□□□ 1.34
RITA1-201ENST00000548278 GCOM1H8Y6P7 765 aaPredicted RBP23.43■■□□□ 1.34
RITA1-201ENST00000548278 POLR2MP0CAP2 368 aa23.43■■□□□ 1.34
RITA1-201ENST00000548278 FCER1AP12319 257 aa23.43■■□□□ 1.34
RITA1-201ENST00000548278 PBX1P40424 430 aa23.43■■□□□ 1.34
RITA1-201ENST00000548278 COBLL1Q53SF7 1204 aa23.43■■□□□ 1.34
RITA1-201ENST00000548278 NBPF12Q5TAG4 269 aaPredicted RBP23.43■■□□□ 1.34
RITA1-201ENST00000548278 UNC13DQ70J99 1090 aa23.43■■□□□ 1.34
RITA1-201ENST00000548278 FCHSD1Q86WN1 690 aa23.43■■□□□ 1.34
RITA1-201ENST00000548278 KIAA1683Q9H0B3 1180 aa23.43■■□□□ 1.34
RITA1-201ENST00000548278 NT5C3AQ9H0P0 336 aa23.43■■□□□ 1.34
RITA1-201ENST00000548278 USP27XA6NNY8 438 aa23.42■■□□□ 1.34
RITA1-201ENST00000548278 CFBP00751 764 aa23.42■■□□□ 1.34
RITA1-201ENST00000548278 KCNJ6P48051 423 aa23.42■■□□□ 1.34
RITA1-201ENST00000548278 TCP11X2Q5H9J9 407 aa23.42■■□□□ 1.34
RITA1-201ENST00000548278 TTI2Q6NXR4 508 aa23.42■■□□□ 1.34
RITA1-201ENST00000548278 LDHDQ86WU2 507 aa23.42■■□□□ 1.34
RITA1-201ENST00000548278 IRF2BP1Q8IU81 584 aa23.42■■□□□ 1.34
RITA1-201ENST00000548278 LPAR1Q92633 364 aa23.42■■□□□ 1.34
RITA1-201ENST00000548278 UPF1Q92900 1129 aaKnown RBP eCLIP23.42■■□□□ 1.342e-7■■■■■ 31.4
RITA1-201ENST00000548278 FAM20AQ96MK3 541 aa23.42■■□□□ 1.34
RITA1-201ENST00000548278 LRRC27Q9C0I9 530 aa23.42■■□□□ 1.34
RITA1-201ENST00000548278 KCNJ18B7U540 433 aa23.42■■□□□ 1.34
RITA1-201ENST00000548278 STAT3P40763 770 aa23.42■■□□□ 1.34
RITA1-201ENST00000548278 GOLGA8FQ08AF8 430 aa23.42■■□□□ 1.34
RITA1-201ENST00000548278 GOLGA8DPQ0D2H9 430 aa23.42■■□□□ 1.34
RITA1-201ENST00000548278 KCNJ12Q14500 433 aa23.42■■□□□ 1.34
RITA1-201ENST00000548278 FILIP1LQ4L180 1135 aa23.42■■□□□ 1.34
RITA1-201ENST00000548278 CCAR2Q8N163 923 aaKnown RBP23.42■■□□□ 1.34
RITA1-201ENST00000548278 KIAA0895Q8NCT3 520 aa23.42■■□□□ 1.34
RITA1-201ENST00000548278 CCDC112Q8NEF3 446 aa23.42■■□□□ 1.34
RITA1-201ENST00000548278 ABCB11O95342 1321 aa23.41■■□□□ 1.34
RITA1-201ENST00000548278 WDR46O15213 610 aaKnown RBP23.41■■□□□ 1.34
RITA1-201ENST00000548278 NRDCO43847 1150 aa23.41■■□□□ 1.34
RITA1-201ENST00000548278 PPP1R2P41236 205 aa23.41■■□□□ 1.34
RITA1-201ENST00000548278 SAMD1Q6SPF0 538 aaPredicted RBP23.41■■□□□ 1.34
RITA1-201ENST00000548278 CYP2W1Q8TAV3 490 aa23.41■■□□□ 1.34
RITA1-201ENST00000548278 MSH4O15457 936 aa23.4■■□□□ 1.34
RITA1-201ENST00000548278 DYMQ7RTS9 669 aa23.4■■□□□ 1.34
RITA1-201ENST00000548278 DDX12PQ92771 950 aa23.4■■□□□ 1.34
RITA1-201ENST00000548278 KIAA1024Q9UPX6 916 aa23.4■■□□□ 1.34
RITA1-201ENST00000548278 CCNE1P24864 410 aa23.4■■□□□ 1.34
RITA1-201ENST00000548278 COPB1P53618 953 aaKnown RBP23.4■■□□□ 1.34
RITA1-201ENST00000548278 E4F1Q66K89 784 aaPredicted RBP23.4■■□□□ 1.34
RITA1-201ENST00000548278 TC2NQ8N9U0 490 aa23.4■■□□□ 1.34
RITA1-201ENST00000548278 P2RX5Q93086 422 aa23.4■■□□□ 1.34
RITA1-201ENST00000548278 HPS3Q969F9 1004 aa23.4■■□□□ 1.34
RITA1-201ENST00000548278 C16orf45Q96MC5 204 aaPredicted RBP23.4■■□□□ 1.34
RITA1-201ENST00000548278 THAP9Q9H5L6 903 aa23.4■■□□□ 1.34
RITA1-201ENST00000548278 ZNF536O15090 1300 aa23.4■■□□□ 1.34
RITA1-201ENST00000548278 IGLV3-22A0A075B6J6 115 aa23.39■■□□□ 1.34
RITA1-201ENST00000548278 POTEB3A0JP26 581 aa23.39■■□□□ 1.34
RITA1-201ENST00000548278 POTECB2RU33 542 aa23.39■■□□□ 1.34
RITA1-201ENST00000548278 MED24O75448 989 aa23.39■■□□□ 1.34
RITA1-201ENST00000548278 ICAM1P05362 532 aa23.39■■□□□ 1.34
RITA1-201ENST00000548278 EHHADHQ08426 723 aa23.39■■□□□ 1.34
RITA1-201ENST00000548278 POTEBQ6S5H4 581 aa23.39■■□□□ 1.34
RITA1-201ENST00000548278 ANKRD20A12PQ8NF67 263 aa23.39■■□□□ 1.34
RITA1-201ENST00000548278 TRIM47Q96LD4 638 aa23.39■■□□□ 1.34
RITA1-201ENST00000548278 DUSP9Q99956 384 aaKnown RBP23.39■■□□□ 1.34
RITA1-201ENST00000548278 SLF1Q9BQI6 1058 aa23.39■■□□□ 1.34
RITA1-201ENST00000548278 ZNF76P36508 570 aa23.39■■□□□ 1.33
RITA1-201ENST00000548278 TMEM139Q8IV31 216 aa23.39■■□□□ 1.33
RITA1-201ENST00000548278 PRPF38AQ8NAV1 312 aaKnown RBP23.39■■□□□ 1.33
RITA1-201ENST00000548278 DNAJC19Q96DA6 116 aa23.39■■□□□ 1.33
RITA1-201ENST00000548278 DOCK1Q14185 1865 aa23.38■■□□□ 1.33
RITA1-201ENST00000548278 BICDL2A1A5D9 508 aa23.38■■□□□ 1.33
RITA1-201ENST00000548278 DGKZQ13574 1117 aa23.38■■□□□ 1.33
RITA1-201ENST00000548278 ANGEL2Q5VTE6 544 aaKnown RBP23.38■■□□□ 1.33
RITA1-201ENST00000548278 DCAF15Q66K64 600 aa23.38■■□□□ 1.33
RITA1-201ENST00000548278 TRPM4Q8TD43 1214 aa23.38■■□□□ 1.33
RITA1-201ENST00000548278 NOC3LQ8WTT2 800 aaKnown RBP23.38■■□□□ 1.33
RITA1-201ENST00000548278 AGBL1Q96MI9 1066 aa23.38■■□□□ 1.33
RITA1-201ENST00000548278 SRRTQ9BXP5 876 aaKnown RBP23.38■■□□□ 1.33
RITA1-201ENST00000548278 SLC39A2Q9NP94 309 aa23.38■■□□□ 1.33
RITA1-201ENST00000548278 TAB2Q9NYJ8 693 aa23.38■■□□□ 1.33
RITA1-201ENST00000548278 ZNF112Q9UJU3 913 aa23.38■■□□□ 1.33
RITA1-201ENST00000548278 VAV3Q9UKW4 847 aa23.38■■□□□ 1.33
RITA1-201ENST00000548278 DICER1Q9UPY3 1922 aaKnown RBP23.38■■□□□ 1.33
RITA1-201ENST00000548278 E9PMD0 336 aa23.37■■□□□ 1.33
RITA1-201ENST00000548278 N4BP3O15049 544 aa23.37■■□□□ 1.33
RITA1-201ENST00000548278 HAUS3Q68CZ6 603 aa23.37■■□□□ 1.33
RITA1-201ENST00000548278 ANKRD40Q6AI12 368 aa23.37■■□□□ 1.33
RITA1-201ENST00000548278 VPS16Q9H269 839 aa23.37■■□□□ 1.33
RITA1-201ENST00000548278 GPRC5DQ9NZD1 345 aa23.37■■□□□ 1.33
RITA1-201ENST00000548278 PLA2G4BP0C869 781 aa23.37■■□□□ 1.33
RITA1-201ENST00000548278 EEF1GP26641 437 aaKnown RBP23.37■■□□□ 1.33
RITA1-201ENST00000548278 ADKP55263 362 aaKnown RBP23.37■■□□□ 1.33
RITA1-201ENST00000548278 NYAP1Q6ZVC0 841 aa23.37■■□□□ 1.33
RITA1-201ENST00000548278 CATSPER3Q86XQ3 398 aa23.37■■□□□ 1.33
RITA1-201ENST00000548278 APOBEC3FQ8IUX4 373 aaKnown RBP23.37■■□□□ 1.33
RITA1-201ENST00000548278 PRIMPOLQ96LW4 560 aa23.37■■□□□ 1.33
RITA1-201ENST00000548278 WDR18Q9BV38 432 aa23.37■■□□□ 1.33
RITA1-201ENST00000548278 TRMT1Q9NXH9 659 aaKnown RBP23.37■■□□□ 1.33
RITA1-201ENST00000548278 CCPG1Q9ULG6 757 aa23.37■■□□□ 1.33
RITA1-201ENST00000548278 ITIH6Q6UXX5 1313 aa23.37■■□□□ 1.33
RITA1-201ENST00000548278 HOXA7P31268 230 aaPredicted RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms