RNA–Protein interactions for RNA: ENST00000548229.2

SVOP-202, Transcript of SV2 related protein, humanhuman

TSL 2

Gene SVOP, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-202ENST00000548229 POTEB3A0JP26 581 aa18.61■□□□□ 0.57
SVOP-202ENST00000548229 MMP3P08254 477 aa18.61■□□□□ 0.57
SVOP-202ENST00000548229 PTK7Q13308 1070 aa18.61■□□□□ 0.57
SVOP-202ENST00000548229 DIEXFQ68CQ4 756 aaKnown RBP18.61■□□□□ 0.57
SVOP-202ENST00000548229 CCDC62Q6P9F0 684 aa18.61■□□□□ 0.57
SVOP-202ENST00000548229 POTEBQ6S5H4 581 aa18.61■□□□□ 0.57
SVOP-202ENST00000548229 CTAGE1Q96RT6 745 aa18.61■□□□□ 0.57
SVOP-202ENST00000548229 GTF2IRD1Q9UHL9 959 aa18.61■□□□□ 0.57
SVOP-202ENST00000548229 ANAPC4Q9UJX5 808 aa18.61■□□□□ 0.57
SVOP-202ENST00000548229 NCK2O43639 380 aa18.6■□□□□ 0.57
SVOP-202ENST00000548229 ORC4O43929 436 aa18.6■□□□□ 0.57
SVOP-202ENST00000548229 ARIH2O95376 493 aa18.6■□□□□ 0.57
SVOP-202ENST00000548229 AMHP03971 560 aa18.6■□□□□ 0.57
SVOP-202ENST00000548229 ZMYM1Q5SVZ6 1142 aa18.6■□□□□ 0.57
SVOP-202ENST00000548229 RASGRP2Q7LDG7 609 aa18.6■□□□□ 0.57
SVOP-202ENST00000548229 SEC62Q99442 399 aaKnown RBP18.6■□□□□ 0.57
SVOP-202ENST00000548229 TCP11L1Q9NUJ3 509 aa18.6■□□□□ 0.57
SVOP-202ENST00000548229 PTPRSQ13332 1948 aa18.6■□□□□ 0.57
SVOP-202ENST00000548229 TTC41PQ6P2S7 1318 aa18.59■□□□□ 0.57
SVOP-202ENST00000548229 SIP14410 1827 aa18.59■□□□□ 0.57
SVOP-202ENST00000548229 LGR5O75473 907 aa18.59■□□□□ 0.57
SVOP-202ENST00000548229 CTDSPL2Q05D32 466 aa18.59■□□□□ 0.57
SVOP-202ENST00000548229 FAM117BQ6P1L5 589 aa18.59■□□□□ 0.57
SVOP-202ENST00000548229 NSUN6Q8TEA1 469 aaKnown RBP18.59■□□□□ 0.57
SVOP-202ENST00000548229 DHX38Q92620 1227 aaKnown RBP18.59■□□□□ 0.57
SVOP-202ENST00000548229 KAT2BQ92831 832 aa18.59■□□□□ 0.57
SVOP-202ENST00000548229 PABPC5Q96DU9 382 aaKnown RBP18.59■□□□□ 0.57
SVOP-202ENST00000548229 MFSD14AQ96MC6 490 aa18.59■□□□□ 0.57
SVOP-202ENST00000548229 FBXL18Q96ME1 805 aa18.59■□□□□ 0.57
SVOP-202ENST00000548229 IWS1Q96ST2 819 aa18.59■□□□□ 0.57
SVOP-202ENST00000548229 FSD1Q9BTV5 496 aa18.59■□□□□ 0.57
SVOP-202ENST00000548229 GPCPD1Q9NPB8 672 aa18.59■□□□□ 0.57
SVOP-202ENST00000548229 FGRP09769 529 aa18.58■□□□□ 0.56
SVOP-202ENST00000548229 ARHGAP1Q07960 439 aa18.58■□□□□ 0.56
SVOP-202ENST00000548229 STXBP2Q15833 593 aa18.58■□□□□ 0.56
SVOP-202ENST00000548229 BANK1Q8NDB2 785 aa18.58■□□□□ 0.56
SVOP-202ENST00000548229 EMID1Q96A84 441 aaPredicted RBP18.58■□□□□ 0.56
SVOP-202ENST00000548229 TTC14Q96N46 770 aa18.58■□□□□ 0.56
SVOP-202ENST00000548229 TMEM47Q9BQJ4 181 aa18.58■□□□□ 0.56
SVOP-202ENST00000548229 C17orf80Q9BSJ5 609 aa18.58■□□□□ 0.56
SVOP-202ENST00000548229 HDAC6Q9UBN7 1215 aa18.58■□□□□ 0.56
SVOP-202ENST00000548229 FRMPD2Q68DX3 1309 aaPredicted RBP18.57■□□□□ 0.56
SVOP-202ENST00000548229 PDHBP11177 359 aa18.57■□□□□ 0.56
SVOP-202ENST00000548229 HTRA4P83105 476 aaPredicted RBP18.57■□□□□ 0.56
SVOP-202ENST00000548229 LAMC2Q13753 1193 aa18.57■□□□□ 0.56
SVOP-202ENST00000548229 LY6KQ17RY6 165 aa18.57■□□□□ 0.56
SVOP-202ENST00000548229 EPC2Q52LR7 807 aa18.57■□□□□ 0.56
SVOP-202ENST00000548229 ZNF618Q5T7W0 954 aa18.57■□□□□ 0.56
SVOP-202ENST00000548229 TSHZ3Q63HK5 1081 aa18.57■□□□□ 0.56
SVOP-202ENST00000548229 SEPT14Q6ZU15 432 aa18.57■□□□□ 0.56
SVOP-202ENST00000548229 SP7Q8TDD2 431 aaPredicted RBP18.57■□□□□ 0.56
SVOP-202ENST00000548229 DCTPP1Q9H773 170 aa18.57■□□□□ 0.56
SVOP-202ENST00000548229 INCENPQ9NQS7 918 aa18.57■□□□□ 0.56
SVOP-202ENST00000548229 TOMM22Q9NS69 142 aa18.57■□□□□ 0.56
SVOP-202ENST00000548229 H3BNC9 293 aa18.56■□□□□ 0.56
SVOP-202ENST00000548229 H3BQ06 376 aaPredicted RBP18.56■□□□□ 0.56
SVOP-202ENST00000548229 PSEN2P49810 448 aa18.56■□□□□ 0.56
SVOP-202ENST00000548229 ZP2Q05996 745 aa18.56■□□□□ 0.56
SVOP-202ENST00000548229 ZNF543Q08ER8 600 aa18.56■□□□□ 0.56
SVOP-202ENST00000548229 MFSD10Q14728 455 aa18.56■□□□□ 0.56
SVOP-202ENST00000548229 CHST3Q7LGC8 479 aa18.56■□□□□ 0.56
SVOP-202ENST00000548229 MCF2L2Q86YR7 1114 aa18.56■□□□□ 0.56
SVOP-202ENST00000548229 ADHFE1Q8IWW8 467 aa18.56■□□□□ 0.56
SVOP-202ENST00000548229 MYOCDQ8IZQ8 938 aa18.56■□□□□ 0.56
SVOP-202ENST00000548229 POP1Q99575 1024 aaKnown RBP18.56■□□□□ 0.56
SVOP-202ENST00000548229 C5orf42Q9H799 3197 aa18.55■□□□□ 0.56
SVOP-202ENST00000548229 C19orf67A6NJJ6 358 aa18.55■□□□□ 0.56
SVOP-202ENST00000548229 F2P00734 622 aa18.55■□□□□ 0.56
SVOP-202ENST00000548229 KIAA0753Q2KHM9 967 aa18.55■□□□□ 0.56
SVOP-202ENST00000548229 GPATCH4Q5T3I0 446 aaKnown RBP18.55■□□□□ 0.56
SVOP-202ENST00000548229 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.55■□□□□ 0.56
SVOP-202ENST00000548229 DHX37Q8IY37 1157 aaKnown RBP18.55■□□□□ 0.56
SVOP-202ENST00000548229 PPTC7Q8NI37 304 aa18.55■□□□□ 0.56
SVOP-202ENST00000548229 ALG1Q9BT22 464 aa18.55■□□□□ 0.56
SVOP-202ENST00000548229 NSUN3Q9H649 340 aaKnown RBP18.55■□□□□ 0.56
SVOP-202ENST00000548229 RSPH10B2B2RC85 870 aa18.54■□□□□ 0.56
SVOP-202ENST00000548229 PPFIA4O75335 1185 aa18.54■□□□□ 0.56
SVOP-202ENST00000548229 EIF3JO75822 258 aaKnown RBP18.54■□□□□ 0.56
SVOP-202ENST00000548229 RSPH10BP0C881 870 aa18.54■□□□□ 0.56
SVOP-202ENST00000548229 GPM6BQ13491 265 aa18.54■□□□□ 0.56
SVOP-202ENST00000548229 COL19A1Q14993 1142 aa18.54■□□□□ 0.56
SVOP-202ENST00000548229 ALX1Q15699 326 aa18.54■□□□□ 0.56
SVOP-202ENST00000548229 TCTN1Q2MV58 587 aa18.54■□□□□ 0.56
SVOP-202ENST00000548229 TRIM71Q2Q1W2 868 aaKnown RBP18.54■□□□□ 0.56
SVOP-202ENST00000548229 USH1GQ495M9 461 aa18.54■□□□□ 0.56
SVOP-202ENST00000548229 TRAF7Q6Q0C0 670 aa18.54■□□□□ 0.56
SVOP-202ENST00000548229 EP400NLQ6ZTU2 488 aa18.54■□□□□ 0.56
SVOP-202ENST00000548229 DBF4BQ8NFT6 615 aa18.54■□□□□ 0.56
SVOP-202ENST00000548229 SNX27Q96L92 541 aa18.54■□□□□ 0.56
SVOP-202ENST00000548229 YME1L1Q96TA2 773 aa18.54■□□□□ 0.56
SVOP-202ENST00000548229 RMDN3Q96TC7 470 aa18.54■□□□□ 0.56
SVOP-202ENST00000548229 DDX41Q9UJV9 622 aaKnown RBP18.54■□□□□ 0.56
SVOP-202ENST00000548229 ABCB11O95342 1321 aa18.53■□□□□ 0.56
SVOP-202ENST00000548229 HAS3O00219 553 aa18.53■□□□□ 0.56
SVOP-202ENST00000548229 SNHG28P0DPA3 235 aa18.53■□□□□ 0.56
SVOP-202ENST00000548229 PCP11498 1178 aaKnown RBP18.53■□□□□ 0.56
SVOP-202ENST00000548229 MBTPS1Q14703 1052 aa18.53■□□□□ 0.56
SVOP-202ENST00000548229 RRP12Q5JTH9 1297 aaKnown RBP18.53■□□□□ 0.56
SVOP-202ENST00000548229 KCNV1Q6PIU1 500 aa18.53■□□□□ 0.56
SVOP-202ENST00000548229 SYTL5Q8TDW5 730 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms