RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 CDC25AP30304 524 aa15.07■□□□□ 0
PTCH1-215ENST00000547672 CCT6AP40227 531 aaKnown RBP15.07■□□□□ 0
PTCH1-215ENST00000547672 HMGCS2P54868 508 aa15.07■□□□□ 0
PTCH1-215ENST00000547672 TPD52L1Q16890 204 aaPredicted RBP15.07■□□□□ 0
PTCH1-215ENST00000547672 CEP55Q53EZ4 464 aa15.07■□□□□ 0
PTCH1-215ENST00000547672 PRAMEF18Q5VWM3 479 aa15.07■□□□□ 0
PTCH1-215ENST00000547672 SPATA1Q5VX52 437 aa15.07■□□□□ 0
PTCH1-215ENST00000547672 ISM2Q6H9L7 571 aa15.07■□□□□ 0
PTCH1-215ENST00000547672 ZSCAN30Q86W11 494 aa15.07■□□□□ 0
PTCH1-215ENST00000547672 CPXCR1Q8N123 301 aa15.07■□□□□ 0
PTCH1-215ENST00000547672 PROCA1Q8NCQ7 364 aaPredicted RBP15.07■□□□□ 0
PTCH1-215ENST00000547672 LARP4BQ92615 738 aaKnown RBP15.07■□□□□ 0
PTCH1-215ENST00000547672 AGBL1Q96MI9 1066 aa15.07■□□□□ 0
PTCH1-215ENST00000547672 TRERF1Q96PN7 1200 aa15.07■□□□□ 0
PTCH1-215ENST00000547672 CTAGE1Q96RT6 745 aa15.07■□□□□ 0
PTCH1-215ENST00000547672 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.07■□□□□ 0
PTCH1-215ENST00000547672 IMPACTQ9P2X3 320 aa15.07■□□□□ 0
PTCH1-215ENST00000547672 SCN4AP35499 1836 aa15.06■□□□□ 0
PTCH1-215ENST00000547672 NRDCO43847 1150 aa15.06■□□□□ 0
PTCH1-215ENST00000547672 RHOBTB3O94955 611 aa15.06■□□□□ 0
PTCH1-215ENST00000547672 KIF20AO95235 890 aa15.06■□□□□ 0
PTCH1-215ENST00000547672 COPB2P35606 906 aa15.06■□□□□ 0
PTCH1-215ENST00000547672 SPAG1Q07617 926 aa15.06■□□□□ 0
PTCH1-215ENST00000547672 TTLL12Q14166 644 aaPredicted RBP15.06■□□□□ 0
PTCH1-215ENST00000547672 TMEM119Q4V9L6 283 aa15.06■□□□□ 0
PTCH1-215ENST00000547672 NAALADL2Q58DX5 795 aa15.06■□□□□ 0
PTCH1-215ENST00000547672 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.06■□□□□ 0
PTCH1-215ENST00000547672 FASTKD5Q7L8L6 764 aaKnown RBP15.06■□□□□ 0
PTCH1-215ENST00000547672 CCDC84Q86UT8 332 aaPredicted RBP15.06■□□□□ 0
PTCH1-215ENST00000547672 GRAMD1CQ8IYS0 662 aa15.06■□□□□ 0
PTCH1-215ENST00000547672 FAM43AQ8N2R8 423 aa15.06■□□□□ 0
PTCH1-215ENST00000547672 ETNPPLQ8TBG4 499 aa15.06■□□□□ 0
PTCH1-215ENST00000547672 NOC3LQ8WTT2 800 aaKnown RBP15.06■□□□□ 0
PTCH1-215ENST00000547672 RAD54LQ92698 747 aa15.06■□□□□ 0
PTCH1-215ENST00000547672 DHTKD1Q96HY7 919 aaPredicted RBP15.06■□□□□ 0
PTCH1-215ENST00000547672 RIT2Q99578 217 aa15.06■□□□□ 0
PTCH1-215ENST00000547672 MMTAG2Q9BU76 263 aaKnown RBP15.06■□□□□ 0
PTCH1-215ENST00000547672 RAVER2Q9HCJ3 691 aaKnown RBP15.06■□□□□ 0
PTCH1-215ENST00000547672 EXOC1Q9NV70 894 aa15.06■□□□□ 0
PTCH1-215ENST00000547672 FBXO40Q9UH90 709 aa15.06■□□□□ 0
PTCH1-215ENST00000547672 DNM3Q9UQ16 869 aa15.06■□□□□ 0
PTCH1-215ENST00000547672 ZNF536O15090 1300 aa15.06■□□□□ 0
PTCH1-215ENST00000547672 BICDL2A1A5D9 508 aa15.05■□□□□ -0
PTCH1-215ENST00000547672 PP2D1A8MPX8 630 aa15.05■□□□□ -0
PTCH1-215ENST00000547672 ESPNB1AK53 854 aa15.05■□□□□ -0
PTCH1-215ENST00000547672 B4DLN1 442 aa15.05■□□□□ -0
PTCH1-215ENST00000547672 MEIS1O00470 390 aa15.05■□□□□ -0
PTCH1-215ENST00000547672 PSMA7O14818 248 aa15.05■□□□□ -0
PTCH1-215ENST00000547672 MAFGO15525 162 aa15.05■□□□□ -0
PTCH1-215ENST00000547672 STAM2O75886 525 aa15.05■□□□□ -0
PTCH1-215ENST00000547672 SERPINC1P01008 464 aa15.05■□□□□ -0
PTCH1-215ENST00000547672 RPA1P27694 616 aa15.05■□□□□ -0
PTCH1-215ENST00000547672 GSDMDP57764 484 aa15.05■□□□□ -0
PTCH1-215ENST00000547672 GRB10Q13322 594 aa15.05■□□□□ -0
PTCH1-215ENST00000547672 CUL4BQ13620 913 aa15.05■□□□□ -0
PTCH1-215ENST00000547672 VGLL4Q14135 290 aa15.05■□□□□ -0
PTCH1-215ENST00000547672 COBLL1Q53SF7 1204 aa15.05■□□□□ -0
PTCH1-215ENST00000547672 PCNX4Q63HM2 1172 aa15.05■□□□□ -0
PTCH1-215ENST00000547672 RNF207Q6ZRF8 634 aa15.05■□□□□ -0
PTCH1-215ENST00000547672 CHST13Q8NET6 341 aa15.05■□□□□ -0
PTCH1-215ENST00000547672 NEK9Q8TD19 979 aa15.05■□□□□ -0
PTCH1-215ENST00000547672 CLEC4DQ8WXI8 215 aa15.05■□□□□ -0
PTCH1-215ENST00000547672 CDCA5Q96FF9 252 aa15.05■□□□□ -0
PTCH1-215ENST00000547672 MXRA8Q9BRK3 442 aa15.05■□□□□ -0
PTCH1-215ENST00000547672 POLR3CQ9BUI4 534 aaPredicted RBP15.05■□□□□ -0
PTCH1-215ENST00000547672 TEX13BQ9BXU2 312 aa15.05■□□□□ -0
PTCH1-215ENST00000547672 TRIM9Q9C026 710 aa15.05■□□□□ -0
PTCH1-215ENST00000547672 TAF1DQ9H5J8 278 aaPredicted RBP15.05■□□□□ -0
PTCH1-215ENST00000547672 TCEAL9Q9UHQ7 104 aa15.05■□□□□ -0
PTCH1-215ENST00000547672 RWDD2AQ9UIY3 292 aa15.05■□□□□ -0
PTCH1-215ENST00000547672 SNCAIPQ9Y6H5 919 aa15.05■□□□□ -0
PTCH1-215ENST00000547672 POLR2AP24928 1970 aaKnown RBP15.05■□□□□ -0
PTCH1-215ENST00000547672 FGFR1OPO95684 399 aaKnown RBP15.04■□□□□ -0
PTCH1-215ENST00000547672 ASIC1P78348 528 aa15.04■□□□□ -0
PTCH1-215ENST00000547672 NCAPHQ15003 741 aa15.04■□□□□ -0
PTCH1-215ENST00000547672 FILIP1LQ4L180 1135 aa15.04■□□□□ -0
PTCH1-215ENST00000547672 SLC5A5Q92911 643 aa15.04■□□□□ -0
PTCH1-215ENST00000547672 TUFT1Q9NNX1 390 aa15.04■□□□□ -0
PTCH1-215ENST00000547672 RPTORQ8N122 1335 aa15.03■□□□□ -0
PTCH1-215ENST00000547672 DCAF8L1A6NGE4 600 aa15.03■□□□□ -0
PTCH1-215ENST00000547672 POTEMA6NI47 508 aa15.03■□□□□ -0
PTCH1-215ENST00000547672 ADM5C9JUS6 153 aa15.03■□□□□ -0
PTCH1-215ENST00000547672 FAM86B1E9PN63 330 aa15.03■□□□□ -0
PTCH1-215ENST00000547672 MSH4O15457 936 aa15.03■□□□□ -0
PTCH1-215ENST00000547672 GAS7O60861 476 aa15.03■□□□□ -0
PTCH1-215ENST00000547672 FAM86B2P0C5J1 330 aa15.03■□□□□ -0
PTCH1-215ENST00000547672 BMP6P22004 513 aa15.03■□□□□ -0
PTCH1-215ENST00000547672 STAT3P40763 770 aa15.03■□□□□ -0
PTCH1-215ENST00000547672 UBASH3AP57075 661 aa15.03■□□□□ -0
PTCH1-215ENST00000547672 FKBP1BP68106 108 aa15.03■□□□□ -0
PTCH1-215ENST00000547672 FANCCQ00597 558 aa15.03■□□□□ -0
PTCH1-215ENST00000547672 PAK1Q13153 545 aa15.03■□□□□ -0
PTCH1-215ENST00000547672 PPIL2Q13356 520 aa15.03■□□□□ -0
PTCH1-215ENST00000547672 PPP2R5CQ13362 524 aa15.03■□□□□ -0
PTCH1-215ENST00000547672 PRKG1Q13976 671 aa15.03■□□□□ -0
PTCH1-215ENST00000547672 LRCH2Q5VUJ6 765 aa15.03■□□□□ -0
PTCH1-215ENST00000547672 UNC13DQ70J99 1090 aa15.03■□□□□ -0
PTCH1-215ENST00000547672 CCDC65Q8IXS2 484 aa15.03■□□□□ -0
PTCH1-215ENST00000547672 GIMAP8Q8ND71 665 aaPredicted RBP15.03■□□□□ -0
PTCH1-215ENST00000547672 GTF3C2Q8WUA4 911 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms