RNA–Protein interactions for RNA: ENST00000547459.5

TWF1-204, Transcript of twinfilin actin binding protein 1, humanhuman

TSL 2

Gene TWF1, Length 3,320 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWF1-204ENST00000547459 PCDHA13Q9Y5I0 950 aa18.25■□□□□ 0.51
TWF1-204ENST00000547459 GUCY2FP51841 1108 aa18.25■□□□□ 0.51
TWF1-204ENST00000547459 USP14P54578 494 aa18.25■□□□□ 0.51
TWF1-204ENST00000547459 GRAPQ13588 217 aa18.25■□□□□ 0.51
TWF1-204ENST00000547459 TRADDQ15628 312 aa18.25■□□□□ 0.51
TWF1-204ENST00000547459 HERC4Q5GLZ8 1057 aaPredicted RBP18.25■□□□□ 0.51
TWF1-204ENST00000547459 MSANTD4Q8NCY6 345 aa18.25■□□□□ 0.51
TWF1-204ENST00000547459 GRAPLQ8TC17 118 aaPredicted RBP18.25■□□□□ 0.51
TWF1-204ENST00000547459 GGA1Q9UJY5 639 aa18.25■□□□□ 0.51
TWF1-204ENST00000547459 PDHBP11177 359 aa18.24■□□□□ 0.51
TWF1-204ENST00000547459 ACTN1P12814 892 aa18.24■□□□□ 0.51
TWF1-204ENST00000547459 ADCY7P51828 1080 aa18.24■□□□□ 0.51
TWF1-204ENST00000547459 ZFPM1Q8IX07 1006 aa18.24■□□□□ 0.51
TWF1-204ENST00000547459 LDHCP07864 332 aa18.24■□□□□ 0.51
TWF1-204ENST00000547459 TBC1D10BQ4KMP7 808 aaPredicted RBP18.24■□□□□ 0.51
TWF1-204ENST00000547459 SPICE1Q8N0Z3 855 aa18.24■□□□□ 0.51
TWF1-204ENST00000547459 ADAMTS1Q9UHI8 967 aa18.24■□□□□ 0.51
TWF1-204ENST00000547459 XIRP1Q702N8 1843 aaKnown RBP18.24■□□□□ 0.51
TWF1-204ENST00000547459 BICDL2A1A5D9 508 aa18.23■□□□□ 0.51
TWF1-204ENST00000547459 UBXN2AP68543 259 aa18.23■□□□□ 0.51
TWF1-204ENST00000547459 NFIAQ12857 509 aa18.23■□□□□ 0.51
TWF1-204ENST00000547459 PRR5LQ6MZQ0 368 aa18.23■□□□□ 0.51
TWF1-204ENST00000547459 CNNM4Q6P4Q7 775 aa18.23■□□□□ 0.51
TWF1-204ENST00000547459 DHTKD1Q96HY7 919 aaPredicted RBP18.23■□□□□ 0.51
TWF1-204ENST00000547459 PYM1Q9BRP8 204 aaKnown RBP18.23■□□□□ 0.51
TWF1-204ENST00000547459 SELENOOQ9BVL4 669 aa18.23■□□□□ 0.51
TWF1-204ENST00000547459 PACSIN1Q9BY11 444 aa18.23■□□□□ 0.51
TWF1-204ENST00000547459 DOT1LQ8TEK3 1739 aa18.23■□□□□ 0.51
TWF1-204ENST00000547459 EPS15P42566 896 aa18.23■□□□□ 0.51
TWF1-204ENST00000547459 ATP1A2P50993 1020 aa18.23■□□□□ 0.51
TWF1-204ENST00000547459 AMPD3Q01432 767 aa18.23■□□□□ 0.51
TWF1-204ENST00000547459 VWA3BQ502W6 1294 aa18.23■□□□□ 0.51
TWF1-204ENST00000547459 TMEM266Q2M3C6 531 aa18.23■□□□□ 0.51
TWF1-204ENST00000547459 SLC10A5Q5PT55 438 aa18.23■□□□□ 0.51
TWF1-204ENST00000547459 KIAA0825Q8IV33 1275 aa18.23■□□□□ 0.51
TWF1-204ENST00000547459 MTMR8Q96EF0 704 aa18.23■□□□□ 0.51
TWF1-204ENST00000547459 CDCA7Q9BWT1 371 aaPredicted RBP18.23■□□□□ 0.51
TWF1-204ENST00000547459 UBXN6Q9BZV1 441 aa18.23■□□□□ 0.51
TWF1-204ENST00000547459 FAM107BQ9H098 131 aa18.23■□□□□ 0.51
TWF1-204ENST00000547459 RAB21Q9UL25 225 aa18.23■□□□□ 0.51
TWF1-204ENST00000547459 DCAF17Q5H9S7 520 aaPredicted RBP18.22■□□□□ 0.51
TWF1-204ENST00000547459 SH2D3CQ8N5H7 860 aa18.22■□□□□ 0.51
TWF1-204ENST00000547459 FAM133AQ8N9E0 248 aa18.22■□□□□ 0.51
TWF1-204ENST00000547459 LSM14BQ9BX40 385 aaKnown RBP18.22■□□□□ 0.51
TWF1-204ENST00000547459 POTEFA5A3E0 1075 aa18.22■□□□□ 0.51
TWF1-204ENST00000547459 POTEIP0CG38 1075 aa18.22■□□□□ 0.51
TWF1-204ENST00000547459 PABPC4Q13310 644 aaKnown RBP eCLIP18.22■□□□□ 0.51
TWF1-204ENST00000547459 KCNB1Q14721 858 aa18.22■□□□□ 0.51
TWF1-204ENST00000547459 POTEGQ6S5H5 508 aa18.22■□□□□ 0.51
TWF1-204ENST00000547459 POTEEQ6S8J3 1075 aa18.22■□□□□ 0.51
TWF1-204ENST00000547459 KLHL7Q8IXQ5 586 aa18.22■□□□□ 0.51
TWF1-204ENST00000547459 ADGRF4Q8IZF3 695 aa18.22■□□□□ 0.51
TWF1-204ENST00000547459 DDX25Q9UHL0 483 aaKnown RBP18.22■□□□□ 0.51
TWF1-204ENST00000547459 HYOU1Q9Y4L1 999 aa18.22■□□□□ 0.51
TWF1-204ENST00000547459 TMCO5BA8MYB1 307 aa18.21■□□□□ 0.51
TWF1-204ENST00000547459 USO1O60763 962 aaKnown RBP18.21■□□□□ 0.51
TWF1-204ENST00000547459 PPP1R11O60927 126 aaPredicted RBP18.21■□□□□ 0.51
TWF1-204ENST00000547459 GSTO1P78417 241 aa18.21■□□□□ 0.51
TWF1-204ENST00000547459 EHHADHQ08426 723 aa18.21■□□□□ 0.51
TWF1-204ENST00000547459 PLS1Q14651 629 aa18.21■□□□□ 0.51
TWF1-204ENST00000547459 TBC1D5Q92609 795 aa18.21■□□□□ 0.51
TWF1-204ENST00000547459 LRRC4BQ9NT99 713 aa18.21■□□□□ 0.51
TWF1-204ENST00000547459 TACC1O75410 805 aa18.21■□□□□ 0.51
TWF1-204ENST00000547459 HOXA13P31271 388 aaPredicted RBP18.21■□□□□ 0.51
TWF1-204ENST00000547459 NEDD1Q8NHV4 660 aa18.21■□□□□ 0.51
TWF1-204ENST00000547459 DBNDD1Q9H9R9 158 aa18.21■□□□□ 0.51
TWF1-204ENST00000547459 USP40Q9NVE5 1235 aa18.21■□□□□ 0.51
TWF1-204ENST00000547459 PCDHA12Q9UN75 941 aa18.21■□□□□ 0.51
TWF1-204ENST00000547459 SCAF8Q9UPN6 1271 aaKnown RBP18.21■□□□□ 0.51
TWF1-204ENST00000547459 DAGLAQ9Y4D2 1042 aa18.21■□□□□ 0.51
TWF1-204ENST00000547459 PSMD14O00487 310 aa18.21■□□□□ 0.51
TWF1-204ENST00000547459 CHMP2AO43633 222 aa18.21■□□□□ 0.51
TWF1-204ENST00000547459 GDF11O95390 407 aa18.21■□□□□ 0.51
TWF1-204ENST00000547459 ACTN2P35609 894 aa18.21■□□□□ 0.51
TWF1-204ENST00000547459 LLGL1Q15334 1064 aa18.21■□□□□ 0.51
TWF1-204ENST00000547459 TAF3Q5VWG9 929 aa18.21■□□□□ 0.51
TWF1-204ENST00000547459 NOP2P46087 812 aaKnown RBP18.2■□□□□ 0.5
TWF1-204ENST00000547459 VAV2P52735 878 aa18.2■□□□□ 0.5
TWF1-204ENST00000547459 ADAT2Q7Z6V5 191 aaKnown RBP18.2■□□□□ 0.5
TWF1-204ENST00000547459 TTYH3Q9C0H2 523 aa18.2■□□□□ 0.5
TWF1-204ENST00000547459 SH3GLB2Q9NR46 395 aa18.2■□□□□ 0.5
TWF1-204ENST00000547459 BMP2KQ9NSY1 1161 aaPredicted RBP18.2■□□□□ 0.5
TWF1-204ENST00000547459 POTEB2H3BUK9 544 aa18.2■□□□□ 0.5
TWF1-204ENST00000547459 RHBDL3P58872 404 aa18.2■□□□□ 0.5
TWF1-204ENST00000547459 PRR16Q569H4 304 aa18.2■□□□□ 0.5
TWF1-204ENST00000547459 CT47A1Q5JQC4 288 aaPredicted RBP18.2■□□□□ 0.5
TWF1-204ENST00000547459 KSR1Q8IVT5 923 aa18.2■□□□□ 0.5
TWF1-204ENST00000547459 PANK4Q9NVE7 773 aa18.2■□□□□ 0.5
TWF1-204ENST00000547459 DDX60Q8IY21 1712 aaKnown RBP18.2■□□□□ 0.5
TWF1-204ENST00000547459 A0A1W2PQC6 194 aa18.2■□□□□ 0.5
TWF1-204ENST00000547459 CLIC2O15247 247 aa18.2■□□□□ 0.5
TWF1-204ENST00000547459 ATP8B1O43520 1251 aa18.2■□□□□ 0.5
TWF1-204ENST00000547459 SERPINB2P05120 415 aa18.2■□□□□ 0.5
TWF1-204ENST00000547459 MAEAQ7L5Y9 396 aa18.2■□□□□ 0.5
TWF1-204ENST00000547459 GPBP1Q86WP2 473 aa18.2■□□□□ 0.5
TWF1-204ENST00000547459 RBM12Q9NTZ6 932 aaKnown RBP18.2■□□□□ 0.5
TWF1-204ENST00000547459 MYO1CO00159 1063 aa18.19■□□□□ 0.5
TWF1-204ENST00000547459 EDIL3O43854 480 aa18.19■□□□□ 0.5
TWF1-204ENST00000547459 ZEB2O60315 1214 aa18.19■□□□□ 0.5
TWF1-204ENST00000547459 SYF2O95926 243 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms